RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 FBXO22Q8NEZ5 403 aa12.16□□□□□ -0.46
CAPRIN1-206ENST00000528948 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
CAPRIN1-206ENST00000528948 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
CAPRIN1-206ENST00000528948 TIAM1Q13009 1591 aa12.14□□□□□ -0.47
CAPRIN1-206ENST00000528948 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-206ENST00000528948 MS4A1P11836 297 aa12.14□□□□□ -0.47
CAPRIN1-206ENST00000528948 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
CAPRIN1-206ENST00000528948 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
CAPRIN1-206ENST00000528948 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-206ENST00000528948 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
CAPRIN1-206ENST00000528948 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
CAPRIN1-206ENST00000528948 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
CAPRIN1-206ENST00000528948 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
CAPRIN1-206ENST00000528948 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
CAPRIN1-206ENST00000528948 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
CAPRIN1-206ENST00000528948 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-206ENST00000528948 CNTLNQ9NXG0 1405 aa12.1□□□□□ -0.47
CAPRIN1-206ENST00000528948 CFAP43Q8NDM7 1665 aa12.08□□□□□ -0.48
CAPRIN1-206ENST00000528948 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
CAPRIN1-206ENST00000528948 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
CAPRIN1-206ENST00000528948 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
CAPRIN1-206ENST00000528948 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
CAPRIN1-206ENST00000528948 LRRC9Q6ZRR7 1453 aa12.07□□□□□ -0.48
CAPRIN1-206ENST00000528948 UACAQ9BZF9 1416 aa12.06□□□□□ -0.48
CAPRIN1-206ENST00000528948 NEFMP07197 916 aa12.06□□□□□ -0.48
CAPRIN1-206ENST00000528948 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
CAPRIN1-206ENST00000528948 PKNOX2Q96KN3 472 aa12.06□□□□□ -0.48
CAPRIN1-206ENST00000528948 KIF27Q86VH2 1401 aa12.05□□□□□ -0.48
CAPRIN1-206ENST00000528948 ABCA5Q8WWZ7 1642 aa12.05□□□□□ -0.48
CAPRIN1-206ENST00000528948 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
CAPRIN1-206ENST00000528948 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
CAPRIN1-206ENST00000528948 CCDC18Q5T9S5 1454 aa12.04□□□□□ -0.48
CAPRIN1-206ENST00000528948 IL27Q8NEV9 243 aa12.04□□□□□ -0.48
CAPRIN1-206ENST00000528948 ARHGAP35Q9NRY4 1499 aa12.03□□□□□ -0.48
CAPRIN1-206ENST00000528948 B4GALNT3Q6L9W6 998 aa12.03□□□□□ -0.48
CAPRIN1-206ENST00000528948 NUDCQ9Y266 331 aa12.02□□□□□ -0.49
CAPRIN1-206ENST00000528948 POLR1AO95602 1720 aaPredicted RBP12.02□□□□□ -0.49
CAPRIN1-206ENST00000528948 GTPBP6O43824 516 aaPredicted RBP12□□□□□ -0.49
CAPRIN1-206ENST00000528948 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
CAPRIN1-206ENST00000528948 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
CAPRIN1-206ENST00000528948 AQRO60306 1485 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPRIN1-206ENST00000528948 EIF4G2P78344 907 aaKnown RBP eCLIP11.98□□□□□ -0.49
CAPRIN1-206ENST00000528948 DAXXQ9UER7 740 aaPredicted RBP11.98□□□□□ -0.49
CAPRIN1-206ENST00000528948 KTN1Q86UP2 1357 aaKnown RBP11.97□□□□□ -0.49
CAPRIN1-206ENST00000528948 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-206ENST00000528948 IRX6P78412 446 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-206ENST00000528948 PRKRIP1Q9H875 184 aaPredicted RBP11.97□□□□□ -0.49
CAPRIN1-206ENST00000528948 NCOA1Q15788 1441 aa11.96□□□□□ -0.49
CAPRIN1-206ENST00000528948 PPP1R37O75864 691 aa11.96□□□□□ -0.49
CAPRIN1-206ENST00000528948 L1TD1Q5T7N2 865 aaKnown RBP11.96□□□□□ -0.49
CAPRIN1-206ENST00000528948 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.49
CAPRIN1-206ENST00000528948 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
CAPRIN1-206ENST00000528948 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
CAPRIN1-206ENST00000528948 FYCO1Q9BQS8 1478 aa11.95□□□□□ -0.5
CAPRIN1-206ENST00000528948 AKNAQ7Z591 1439 aa11.94□□□□□ -0.5
CAPRIN1-206ENST00000528948 RRP9O43818 475 aaKnown RBP11.94□□□□□ -0.5
CAPRIN1-206ENST00000528948 CUX1P39880 1505 aa11.94□□□□□ -0.5
CAPRIN1-206ENST00000528948 FMN1Q68DA7 1419 aa11.94□□□□□ -0.5
CAPRIN1-206ENST00000528948 EFCAB5A4FU69 1503 aa11.93□□□□□ -0.5
CAPRIN1-206ENST00000528948 BACH2Q9BYV9 841 aa11.93□□□□□ -0.5
CAPRIN1-206ENST00000528948 SNPHO15079 494 aa11.92□□□□□ -0.5
CAPRIN1-206ENST00000528948 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
CAPRIN1-206ENST00000528948 INSRP06213 1382 aa11.92□□□□□ -0.5
CAPRIN1-206ENST00000528948 CCDC7Q96M83 1385 aa11.92□□□□□ -0.5
CAPRIN1-206ENST00000528948 HECW1Q76N89 1606 aa11.91□□□□□ -0.5
CAPRIN1-206ENST00000528948 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
CAPRIN1-206ENST00000528948 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-206ENST00000528948 PHLDB1Q86UU1 1377 aa11.91□□□□□ -0.5
CAPRIN1-206ENST00000528948 PDE4AP27815 886 aa11.9□□□□□ -0.5
CAPRIN1-206ENST00000528948 MIA2Q96PC5 1412 aa11.89□□□□□ -0.51
CAPRIN1-206ENST00000528948 ZMYM4Q5VZL5 1548 aa11.89□□□□□ -0.51
CAPRIN1-206ENST00000528948 KDM5BQ9UGL1 1544 aa11.89□□□□□ -0.51
CAPRIN1-206ENST00000528948 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-206ENST00000528948 FAM50AQ14320 339 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-206ENST00000528948 FGD6Q6ZV73 1430 aa11.86□□□□□ -0.51
CAPRIN1-206ENST00000528948 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
CAPRIN1-206ENST00000528948 TMC2Q8TDI7 906 aa11.86□□□□□ -0.51
CAPRIN1-206ENST00000528948 THOC2Q8NI27 1593 aaKnown RBP11.86□□□□□ -0.51
CAPRIN1-206ENST00000528948 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
CAPRIN1-206ENST00000528948 PAXIP1Q6ZW49 1069 aaPredicted RBP11.85□□□□□ -0.51
CAPRIN1-206ENST00000528948 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
CAPRIN1-206ENST00000528948 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
CAPRIN1-206ENST00000528948 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
CAPRIN1-206ENST00000528948 CDAN1Q8IWY9 1227 aa11.83□□□□□ -0.52
CAPRIN1-206ENST00000528948 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
CAPRIN1-206ENST00000528948 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
CAPRIN1-206ENST00000528948 ISY1Q9ULR0 285 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-206ENST00000528948 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
CAPRIN1-206ENST00000528948 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
CAPRIN1-206ENST00000528948 KIF3CO14782 793 aa11.82□□□□□ -0.52
CAPRIN1-206ENST00000528948 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
CAPRIN1-206ENST00000528948 RRP1P56182 461 aaKnown RBP11.82□□□□□ -0.52
CAPRIN1-206ENST00000528948 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
CAPRIN1-206ENST00000528948 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
CAPRIN1-206ENST00000528948 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
CAPRIN1-206ENST00000528948 CCDC144AA2RUR9 1427 aa11.81□□□□□ -0.52
CAPRIN1-206ENST00000528948 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
CAPRIN1-206ENST00000528948 HSP90AA2PQ14568 343 aaPredicted RBP11.81□□□□□ -0.52
CAPRIN1-206ENST00000528948 PCF11O94913 1555 aaKnown RBP11.8□□□□□ -0.52
CAPRIN1-206ENST00000528948 NAIPQ13075 1403 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms