RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	AGL	P35573	1532 aa		11.85	□□□□□ -0.51
MS4A6A-208	ENST00000528851	ATP7A	Q04656	1500 aa		11.85	□□□□□ -0.51
MS4A6A-208	ENST00000528851	KIDINS220	Q9ULH0	1771 aa		11.85	□□□□□ -0.51
MS4A6A-208	ENST00000528851	PTPN23	Q9H3S7	1636 aa		11.85	□□□□□ -0.51
MS4A6A-208	ENST00000528851	DIP2C	Q9Y2E4	1556 aa		11.84	□□□□□ -0.51
MS4A6A-208	ENST00000528851	A2M	P01023	1474 aa		11.84	□□□□□ -0.51
MS4A6A-208	ENST00000528851	DAPK1	P53355	1430 aa		11.83	□□□□□ -0.52
MS4A6A-208	ENST00000528851	ESF1	Q9H501	851 aa	Known RBP	11.82	□□□□□ -0.52
MS4A6A-208	ENST00000528851	INO80	Q9ULG1	1556 aa	Predicted RBP	11.81	□□□□□ -0.52
MS4A6A-208	ENST00000528851	ABCA6	Q8N139	1617 aa		11.81	□□□□□ -0.52
MS4A6A-208	ENST00000528851	MAST1	Q9Y2H9	1570 aa		11.81	□□□□□ -0.52
MS4A6A-208	ENST00000528851	MYCN	P04198	464 aa	Predicted RBP	11.81	□□□□□ -0.52
MS4A6A-208	ENST00000528851	GGT6	Q6P531	493 aa		11.81	□□□□□ -0.52
MS4A6A-208	ENST00000528851	CHIC2	Q9UKJ5	165 aa		11.81	□□□□□ -0.52
MS4A6A-208	ENST00000528851	ANKRD30A	Q9BXX3	1397 aa		11.8	□□□□□ -0.52
MS4A6A-208	ENST00000528851	SHANK2	Q9UPX8	1470 aa		11.8	□□□□□ -0.52
MS4A6A-208	ENST00000528851	KIF3B	O15066	747 aa		11.8	□□□□□ -0.52
MS4A6A-208	ENST00000528851	RRP7BP	Q9NSQ0	103 aa		11.8	□□□□□ -0.52
MS4A6A-208	ENST00000528851	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.79	□□□□□ -0.52
MS4A6A-208	ENST00000528851	RRBP1	Q9P2E9	1410 aa	Known RBP	11.79	□□□□□ -0.52
MS4A6A-208	ENST00000528851	BCORL1	Q5H9F3	1711 aa		11.79	□□□□□ -0.52
MS4A6A-208	ENST00000528851	ADAMTSL3	P82987	1691 aa		11.78	□□□□□ -0.52
MS4A6A-208	ENST00000528851	NCOA1	Q15788	1441 aa		11.78	□□□□□ -0.52
MS4A6A-208	ENST00000528851	DNMT1	P26358	1616 aa	Known RBP	11.77	□□□□□ -0.52
MS4A6A-208	ENST00000528851	KIF15	Q9NS87	1388 aa		11.76	□□□□□ -0.53
MS4A6A-208	ENST00000528851	PTPRM	P28827	1452 aa		11.76	□□□□□ -0.53
MS4A6A-208	ENST00000528851	ADGB	Q8N7X0	1667 aa		11.76	□□□□□ -0.53
MS4A6A-208	ENST00000528851	PLXNC1	O60486	1568 aa		11.76	□□□□□ -0.53
MS4A6A-208	ENST00000528851	CNTLN	Q9NXG0	1405 aa		11.76	□□□□□ -0.53
MS4A6A-208	ENST00000528851	SIGLEC1	Q9BZZ2	1709 aa		11.75	□□□□□ -0.53
MS4A6A-208	ENST00000528851	ROCK1	Q13464	1354 aa		11.75	□□□□□ -0.53
MS4A6A-208	ENST00000528851	DUOX2	Q9NRD8	1548 aa		11.75	□□□□□ -0.53
MS4A6A-208	ENST00000528851	ADGRL2	O95490	1459 aa		11.75	□□□□□ -0.53
MS4A6A-208	ENST00000528851	ITGAE	P38570	1179 aa		11.74	□□□□□ -0.53
MS4A6A-208	ENST00000528851	PTPRK	Q15262	1439 aa		11.74	□□□□□ -0.53
MS4A6A-208	ENST00000528851	WASHC2C	Q9Y4E1	1318 aa		11.74	□□□□□ -0.53
MS4A6A-208	ENST00000528851	ERBIN	Q96RT1	1412 aa		11.73	□□□□□ -0.53
MS4A6A-208	ENST00000528851	ZMYM3	Q14202	1370 aa		11.73	□□□□□ -0.53
MS4A6A-208	ENST00000528851	CEBPA	P49715	358 aa	Predicted RBP	11.72	□□□□□ -0.53
MS4A6A-208	ENST00000528851	MADD	Q8WXG6	1647 aa		11.72	□□□□□ -0.53
MS4A6A-208	ENST00000528851	PIP4P2	Q8N4L2	257 aa		11.71	□□□□□ -0.54
MS4A6A-208	ENST00000528851	ANKRD50	Q9ULJ7	1429 aa		11.7	□□□□□ -0.54
MS4A6A-208	ENST00000528851	CROCC2	H7BZ55	1655 aa		11.69	□□□□□ -0.54
MS4A6A-208	ENST00000528851	FAM135A	Q9P2D6	1515 aa		11.69	□□□□□ -0.54
MS4A6A-208	ENST00000528851	REM2	Q8IYK8	340 aa	Predicted RBP	11.68	□□□□□ -0.54
MS4A6A-208	ENST00000528851	KANK1	Q14678	1352 aa		11.68	□□□□□ -0.54
MS4A6A-208	ENST00000528851	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.68	□□□□□ -0.54
MS4A6A-208	ENST00000528851	RIMS1	Q86UR5	1692 aa	Known RBP	11.67	□□□□□ -0.54
MS4A6A-208	ENST00000528851	FER1L4	A9Z1Z3	1794 aa		11.66	□□□□□ -0.54
MS4A6A-208	ENST00000528851	NPAT	Q14207	1427 aa		11.65	□□□□□ -0.54
MS4A6A-208	ENST00000528851	KDM5D	Q9BY66	1539 aa		11.65	□□□□□ -0.54
MS4A6A-208	ENST00000528851	HAX1	O00165	279 aa		11.65	□□□□□ -0.55
MS4A6A-208	ENST00000528851	ACIN1	Q9UKV3	1341 aa	Known RBP	11.64	□□□□□ -0.55
MS4A6A-208	ENST00000528851	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.64	□□□□□ -0.55
MS4A6A-208	ENST00000528851	RNF17	Q9BXT8	1623 aa	Known RBP	11.64	□□□□□ -0.55
MS4A6A-208	ENST00000528851	MROH2A	A6NES4	1674 aa		11.63	□□□□□ -0.55
MS4A6A-208	ENST00000528851	NAIP	Q13075	1403 aa		11.62	□□□□□ -0.55
MS4A6A-208	ENST00000528851	ARHGAP31	Q2M1Z3	1444 aa		11.62	□□□□□ -0.55
MS4A6A-208	ENST00000528851	HFM1	A2PYH4	1435 aa		11.61	□□□□□ -0.55
MS4A6A-208	ENST00000528851	PZP	P20742	1482 aa		11.61	□□□□□ -0.55
MS4A6A-208	ENST00000528851	ABCC3	O15438	1527 aa		11.61	□□□□□ -0.55
MS4A6A-208	ENST00000528851	SETD1B	Q9UPS6	1966 aa	Known RBP	11.6	□□□□□ -0.55
MS4A6A-208	ENST00000528851	FXR2	P51116	673 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
MS4A6A-208	ENST00000528851	CLTC	Q00610	1675 aa	Known RBP	11.6	□□□□□ -0.55
MS4A6A-208	ENST00000528851	NUP155	O75694	1391 aa		11.6	□□□□□ -0.55
MS4A6A-208	ENST00000528851	UHRF1BP1	Q6BDS2	1440 aa		11.6	□□□□□ -0.55
MS4A6A-208	ENST00000528851	PRDM15	P57071	1507 aa	Predicted RBP	11.6	□□□□□ -0.55
MS4A6A-208	ENST00000528851	LMTK2	Q8IWU2	1503 aa		11.6	□□□□□ -0.55
MS4A6A-208	ENST00000528851	MROH1	Q8NDA8	1641 aa		11.6	□□□□□ -0.55
MS4A6A-208	ENST00000528851	C3	P01024	1663 aa		11.59	□□□□□ -0.55
MS4A6A-208	ENST00000528851	TNR	Q92752	1358 aa		11.59	□□□□□ -0.55
MS4A6A-208	ENST00000528851	VWDE	Q8N2E2	1590 aa		11.59	□□□□□ -0.55
MS4A6A-208	ENST00000528851	DEPDC5	O75140	1603 aa		11.59	□□□□□ -0.55
MS4A6A-208	ENST00000528851	ZC3H13	Q5T200	1668 aa	Known RBP	11.58	□□□□□ -0.56
MS4A6A-208	ENST00000528851	HRC	P23327	699 aa		11.58	□□□□□ -0.56
MS4A6A-208	ENST00000528851	LMTK3	Q96Q04	1460 aa		11.57	□□□□□ -0.56
MS4A6A-208	ENST00000528851	HSPA2	P54652	639 aa		11.57	□□□□□ -0.56
MS4A6A-208	ENST00000528851	TRIM52	Q96A61	297 aa		11.57	□□□□□ -0.56
MS4A6A-208	ENST00000528851	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.56	□□□□□ -0.56
MS4A6A-208	ENST00000528851	SLC52A1	Q9NWF4	448 aa		11.56	□□□□□ -0.56
MS4A6A-208	ENST00000528851	SETD5	Q9C0A6	1442 aa		11.55	□□□□□ -0.56
MS4A6A-208	ENST00000528851	RPRD2	Q5VT52	1461 aa	Known RBP	11.54	□□□□□ -0.56
MS4A6A-208	ENST00000528851	NLRP1	Q9C000	1473 aa		11.54	□□□□□ -0.56
MS4A6A-208	ENST00000528851	UNC13B	O14795	1591 aa		11.54	□□□□□ -0.56
MS4A6A-208	ENST00000528851	ERVK-7	P63135	1459 aa		11.53	□□□□□ -0.56
MS4A6A-208	ENST00000528851	PITPNM1	O00562	1244 aa		11.53	□□□□□ -0.56
MS4A6A-208	ENST00000528851	IDI1	Q13907	227 aa		11.53	□□□□□ -0.56
MS4A6A-208	ENST00000528851	SPATA31D1	Q6ZQQ2	1576 aa		11.53	□□□□□ -0.56
MS4A6A-208	ENST00000528851	A2ML1	A8K2U0	1454 aa		11.53	□□□□□ -0.56
MS4A6A-208	ENST00000528851	PREX1	Q8TCU6	1659 aa		11.52	□□□□□ -0.56
MS4A6A-208	ENST00000528851	NOS1	P29475	1434 aa		11.52	□□□□□ -0.57
MS4A6A-208	ENST00000528851	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.52	□□□□□ -0.57
MS4A6A-208	ENST00000528851	CAMSAP1	Q5T5Y3	1602 aa		11.52	□□□□□ -0.57
MS4A6A-208	ENST00000528851	PKD2	Q13563	968 aa		11.51	□□□□□ -0.57
MS4A6A-208	ENST00000528851	TRIM26	Q12899	539 aa	Predicted RBP	11.51	□□□□□ -0.57
MS4A6A-208	ENST00000528851	CEP152	O94986	1710 aa		11.5	□□□□□ -0.57
MS4A6A-208	ENST00000528851	GCC2	Q8IWJ2	1684 aa		11.5	□□□□□ -0.57
MS4A6A-208	ENST00000528851	EFCAB6	Q5THR3	1501 aa		11.5	□□□□□ -0.57
MS4A6A-208	ENST00000528851	ANKLE2	Q86XL3	938 aa		11.5	□□□□□ -0.57
MS4A6A-208	ENST00000528851	MPHOSPH9	Q99550	1183 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms