RNA–Protein interactions for RNA: ENST00000528828.1

NSD3-209, Transcript of nuclear receptor binding SET domain protein 3, humanhuman

TSL 1 (best)

Gene NSD3, Length 1,376 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSD3-209ENST00000528828 C3P01024 1663 aa12.86□□□□□ -0.35
NSD3-209ENST00000528828 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
NSD3-209ENST00000528828 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
NSD3-209ENST00000528828 ZNF644Q9H582 1327 aaPredicted RBP12.84□□□□□ -0.35
NSD3-209ENST00000528828 CFDP1Q9UEE9 299 aaPredicted RBP12.83□□□□□ -0.36
NSD3-209ENST00000528828 ESF1Q9H501 851 aaKnown RBP12.82□□□□□ -0.36
NSD3-209ENST00000528828 CCNB3Q8WWL7 1395 aa12.82□□□□□ -0.36
NSD3-209ENST00000528828 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
NSD3-209ENST00000528828 ATP7AQ04656 1500 aa12.81□□□□□ -0.36
NSD3-209ENST00000528828 SUPT6HQ7KZ85 1726 aaKnown RBP12.8□□□□□ -0.36
NSD3-209ENST00000528828 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
NSD3-209ENST00000528828 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
NSD3-209ENST00000528828 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
NSD3-209ENST00000528828 SETD1BQ9UPS6 1966 aaKnown RBP12.79□□□□□ -0.36
NSD3-209ENST00000528828 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
NSD3-209ENST00000528828 A2MP01023 1474 aa12.78□□□□□ -0.36
NSD3-209ENST00000528828 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
NSD3-209ENST00000528828 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
NSD3-209ENST00000528828 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
NSD3-209ENST00000528828 CEP162Q5TB80 1403 aa12.77□□□□□ -0.37
NSD3-209ENST00000528828 GGT6Q6P531 493 aa12.77□□□□□ -0.37
NSD3-209ENST00000528828 PLEKHH2Q8IVE3 1493 aa12.77□□□□□ -0.37
NSD3-209ENST00000528828 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
NSD3-209ENST00000528828 MBD5Q9P267 1494 aa12.77□□□□□ -0.37
NSD3-209ENST00000528828 PTPRTO14522 1441 aa12.76□□□□□ -0.37
NSD3-209ENST00000528828 NCOA1Q15788 1441 aa12.76□□□□□ -0.37
NSD3-209ENST00000528828 CLTCQ00610 1675 aaKnown RBP12.75□□□□□ -0.37
NSD3-209ENST00000528828 NCKAP5LQ9HCH0 1330 aa12.75□□□□□ -0.37
NSD3-209ENST00000528828 MROH2AA6NES4 1674 aa12.75□□□□□ -0.37
NSD3-209ENST00000528828 EHBP1L1Q8N3D4 1523 aa12.75□□□□□ -0.37
NSD3-209ENST00000528828 NPATQ14207 1427 aa12.74□□□□□ -0.37
NSD3-209ENST00000528828 CAMSAP1Q5T5Y3 1602 aa12.74□□□□□ -0.37
NSD3-209ENST00000528828 PTPRKQ15262 1439 aa12.74□□□□□ -0.37
NSD3-209ENST00000528828 LTBP4Q8N2S1 1624 aa12.73□□□□□ -0.37
NSD3-209ENST00000528828 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
NSD3-209ENST00000528828 LOC105371045A0A1W2PR82 267 aa12.71□□□□□ -0.37
NSD3-209ENST00000528828 NCOA2Q15596 1464 aa12.7□□□□□ -0.38
NSD3-209ENST00000528828 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
NSD3-209ENST00000528828 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
NSD3-209ENST00000528828 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
NSD3-209ENST00000528828 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
NSD3-209ENST00000528828 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
NSD3-209ENST00000528828 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
NSD3-209ENST00000528828 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
NSD3-209ENST00000528828 FBXO31Q5XUX0 539 aaPredicted RBP12.69□□□□□ -0.38
NSD3-209ENST00000528828 CEP170BQ9Y4F5 1589 aaPredicted RBP12.68□□□□□ -0.38
NSD3-209ENST00000528828 KIF3BO15066 747 aa12.68□□□□□ -0.38
NSD3-209ENST00000528828 CCDC141Q6ZP82 1450 aa12.66□□□□□ -0.38
NSD3-209ENST00000528828 ZNF142P52746 1687 aaPredicted RBP12.66□□□□□ -0.38
NSD3-209ENST00000528828 PLA2R1Q13018 1463 aa12.65□□□□□ -0.38
NSD3-209ENST00000528828 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
NSD3-209ENST00000528828 HAX1O00165 279 aa12.65□□□□□ -0.38
NSD3-209ENST00000528828 KANK4Q5T7N3 995 aaPredicted RBP12.65□□□□□ -0.38
NSD3-209ENST00000528828 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
NSD3-209ENST00000528828 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
NSD3-209ENST00000528828 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
NSD3-209ENST00000528828 A2ML1A8K2U0 1454 aa12.63□□□□□ -0.39
NSD3-209ENST00000528828 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
NSD3-209ENST00000528828 PKD2Q13563 968 aa12.63□□□□□ -0.39
NSD3-209ENST00000528828 VPS8Q8N3P4 1428 aa12.63□□□□□ -0.39
NSD3-209ENST00000528828 LRRC9Q6ZRR7 1453 aa12.62□□□□□ -0.39
NSD3-209ENST00000528828 DNMT1P26358 1616 aaKnown RBP12.62□□□□□ -0.39
NSD3-209ENST00000528828 TNRQ92752 1358 aa12.62□□□□□ -0.39
NSD3-209ENST00000528828 WASHC2CQ9Y4E1 1318 aa12.62□□□□□ -0.39
NSD3-209ENST00000528828 KDM5DQ9BY66 1539 aa12.61□□□□□ -0.39
NSD3-209ENST00000528828 RSPH4AQ5TD94 716 aa12.61□□□□□ -0.39
NSD3-209ENST00000528828 PZPP20742 1482 aa12.61□□□□□ -0.39
NSD3-209ENST00000528828 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
NSD3-209ENST00000528828 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
NSD3-209ENST00000528828 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
NSD3-209ENST00000528828 UBAP1LF5GYI3 381 aa12.58□□□□□ -0.4
NSD3-209ENST00000528828 TSPY4P0CV99 314 aa12.58□□□□□ -0.4
NSD3-209ENST00000528828 TSPY10P0CW01 314 aa12.58□□□□□ -0.4
NSD3-209ENST00000528828 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
NSD3-209ENST00000528828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.58□□□□□ -0.4
NSD3-209ENST00000528828 MIA2Q96PC5 1412 aa12.57□□□□□ -0.4
NSD3-209ENST00000528828 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
NSD3-209ENST00000528828 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
NSD3-209ENST00000528828 ABCC3O15438 1527 aa12.54□□□□□ -0.4
NSD3-209ENST00000528828 FAM135AQ9P2D6 1515 aa12.54□□□□□ -0.4
NSD3-209ENST00000528828 SPATA31D1Q6ZQQ2 1576 aa12.54□□□□□ -0.4
NSD3-209ENST00000528828 MAST1Q9Y2H9 1570 aa12.54□□□□□ -0.4
NSD3-209ENST00000528828 EVX2Q03828 476 aa12.54□□□□□ -0.4
NSD3-209ENST00000528828 MROH1Q8NDA8 1641 aa12.54□□□□□ -0.4
NSD3-209ENST00000528828 RNF17Q9BXT8 1623 aaKnown RBP12.54□□□□□ -0.4
NSD3-209ENST00000528828 POLR1AO95602 1720 aaPredicted RBP12.54□□□□□ -0.4
NSD3-209ENST00000528828 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
NSD3-209ENST00000528828 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
NSD3-209ENST00000528828 NLRP1Q9C000 1473 aa12.53□□□□□ -0.4
NSD3-209ENST00000528828 ANKLE2Q86XL3 938 aa12.53□□□□□ -0.4
NSD3-209ENST00000528828 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
NSD3-209ENST00000528828 THEMISQ8N1K5 641 aaPredicted RBP12.52□□□□□ -0.41
NSD3-209ENST00000528828 VWDEQ8N2E2 1590 aa12.51□□□□□ -0.41
NSD3-209ENST00000528828 PIP4K2BP78356 416 aa12.51□□□□□ -0.41
NSD3-209ENST00000528828 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
NSD3-209ENST00000528828 NPHP4O75161 1426 aaPredicted RBP12.5□□□□□ -0.41
NSD3-209ENST00000528828 RRP7BPQ9NSQ0 103 aa12.5□□□□□ -0.41
NSD3-209ENST00000528828 ABCC5O15440 1437 aa12.49□□□□□ -0.41
NSD3-209ENST00000528828 SOCS7O14512 581 aa12.49□□□□□ -0.41
NSD3-209ENST00000528828 MED14O60244 1454 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms