RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
SRPRA-203ENST00000528744 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
SRPRA-203ENST00000528744 LTBP4Q8N2S1 1624 aa18.21■□□□□ 0.51
SRPRA-203ENST00000528744 ZNF335Q9H4Z2 1342 aaPredicted RBP18.21■□□□□ 0.51
SRPRA-203ENST00000528744 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
SRPRA-203ENST00000528744 TNRQ92752 1358 aa18.18■□□□□ 0.5
SRPRA-203ENST00000528744 PKD2Q13563 968 aa18.18■□□□□ 0.5
SRPRA-203ENST00000528744 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
SRPRA-203ENST00000528744 ABCC5O15440 1437 aa18.16■□□□□ 0.5
SRPRA-203ENST00000528744 RRP7BPQ9NSQ0 103 aa18.16■□□□□ 0.5
SRPRA-203ENST00000528744 CEP170BQ9Y4F5 1589 aaPredicted RBP18.16■□□□□ 0.5
SRPRA-203ENST00000528744 A2ML1A8K2U0 1454 aa18.15■□□□□ 0.5
SRPRA-203ENST00000528744 PZPP20742 1482 aa18.15■□□□□ 0.5
SRPRA-203ENST00000528744 PLA2R1Q13018 1463 aa18.14■□□□□ 0.5
SRPRA-203ENST00000528744 MYO3AQ8NEV4 1616 aa18.14■□□□□ 0.49
SRPRA-203ENST00000528744 APLP2Q06481 763 aa18.13■□□□□ 0.49
SRPRA-203ENST00000528744 KDM5DQ9BY66 1539 aa18.13■□□□□ 0.49
SRPRA-203ENST00000528744 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
SRPRA-203ENST00000528744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.49
SRPRA-203ENST00000528744 MAST1Q9Y2H9 1570 aa18.12■□□□□ 0.49
SRPRA-203ENST00000528744 DNMT1P26358 1616 aaKnown RBP18.11■□□□□ 0.49
SRPRA-203ENST00000528744 ABCC3O15438 1527 aa18.08■□□□□ 0.49
SRPRA-203ENST00000528744 THEMISQ8N1K5 641 aaPredicted RBP18.08■□□□□ 0.48
SRPRA-203ENST00000528744 ZNF142P52746 1687 aaPredicted RBP18.08■□□□□ 0.48
SRPRA-203ENST00000528744 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
SRPRA-203ENST00000528744 KIF15Q9NS87 1388 aa18.07■□□□□ 0.48
SRPRA-203ENST00000528744 ANKLE2Q86XL3 938 aa18.07■□□□□ 0.48
SRPRA-203ENST00000528744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.486e-8■■■□□ 15.1
SRPRA-203ENST00000528744 MROH1Q8NDA8 1641 aa18.06■□□□□ 0.48
SRPRA-203ENST00000528744 DAPK1P53355 1430 aa18.06■□□□□ 0.48
SRPRA-203ENST00000528744 FAM135AQ9P2D6 1515 aa18.04■□□□□ 0.48
SRPRA-203ENST00000528744 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
SRPRA-203ENST00000528744 RNF17Q9BXT8 1623 aaKnown RBP18.03■□□□□ 0.48
SRPRA-203ENST00000528744 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
SRPRA-203ENST00000528744 ERVK-7P63135 1459 aa18.02■□□□□ 0.48
SRPRA-203ENST00000528744 NLRP1Q9C000 1473 aa18.02■□□□□ 0.48
SRPRA-203ENST00000528744 UBAP1LF5GYI3 381 aa18.02■□□□□ 0.48
SRPRA-203ENST00000528744 NEURL4Q96JN8 1562 aa18.02■□□□□ 0.48
SRPRA-203ENST00000528744 LTKP29376 864 aa18.01■□□□□ 0.47
SRPRA-203ENST00000528744 FAM50AQ14320 339 aaKnown RBP18■□□□□ 0.47
SRPRA-203ENST00000528744 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
SRPRA-203ENST00000528744 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
SRPRA-203ENST00000528744 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
SRPRA-203ENST00000528744 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
SRPRA-203ENST00000528744 ILDR2Q71H61 639 aa17.99■□□□□ 0.47
SRPRA-203ENST00000528744 NPHP4O75161 1426 aaPredicted RBP17.98■□□□□ 0.47
SRPRA-203ENST00000528744 ERBINQ96RT1 1412 aa17.98■□□□□ 0.47
SRPRA-203ENST00000528744 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
SRPRA-203ENST00000528744 EIF2AK4Q9P2K8 1649 aaKnown RBP17.97■□□□□ 0.47
SRPRA-203ENST00000528744 ARHGAP31Q2M1Z3 1444 aa17.97■□□□□ 0.47
SRPRA-203ENST00000528744 MED14O60244 1454 aa17.96■□□□□ 0.47
SRPRA-203ENST00000528744 ANKRD30AQ9BXX3 1397 aa17.96■□□□□ 0.47
SRPRA-203ENST00000528744 IDI1Q13907 227 aa17.96■□□□□ 0.47
SRPRA-203ENST00000528744 TXNDC2Q86VQ3 553 aa17.94■□□□□ 0.46
SRPRA-203ENST00000528744 CFAP65Q6ZU64 1925 aaKnown RBP17.93■□□□□ 0.46
SRPRA-203ENST00000528744 DISP3Q9P2K9 1392 aa17.92■□□□□ 0.46
SRPRA-203ENST00000528744 CEP152O94986 1710 aa17.92■□□□□ 0.46
SRPRA-203ENST00000528744 VWDEQ8N2E2 1590 aa17.92■□□□□ 0.46
SRPRA-203ENST00000528744 PRDM15P57071 1507 aaPredicted RBP17.92■□□□□ 0.46
SRPRA-203ENST00000528744 PIP4K2BP78356 416 aa17.91■□□□□ 0.46
SRPRA-203ENST00000528744 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
SRPRA-203ENST00000528744 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
SRPRA-203ENST00000528744 HSPA1LP34931 641 aa17.89■□□□□ 0.45
SRPRA-203ENST00000528744 ZC3H13Q5T200 1668 aaKnown RBP17.89■□□□□ 0.45
SRPRA-203ENST00000528744 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
SRPRA-203ENST00000528744 KANK1Q14678 1352 aa17.88■□□□□ 0.45
SRPRA-203ENST00000528744 ADRA2BP18089 450 aa17.87■□□□□ 0.45
SRPRA-203ENST00000528744 LMTK2Q8IWU2 1503 aa17.87■□□□□ 0.45
SRPRA-203ENST00000528744 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
SRPRA-203ENST00000528744 TOM1O60784 492 aa17.86■□□□□ 0.45
SRPRA-203ENST00000528744 TMEM2Q9UHN6 1383 aa17.86■□□□□ 0.45
SRPRA-203ENST00000528744 NOS1P29475 1434 aa17.86■□□□□ 0.45
SRPRA-203ENST00000528744 ANKRD50Q9ULJ7 1429 aa17.86■□□□□ 0.45
SRPRA-203ENST00000528744 CPS1P31327 1500 aa17.86■□□□□ 0.45
SRPRA-203ENST00000528744 POLR1AO95602 1720 aaPredicted RBP17.86■□□□□ 0.45
SRPRA-203ENST00000528744 SCAF11Q99590 1463 aaKnown RBP17.85■□□□□ 0.45
SRPRA-203ENST00000528744 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
SRPRA-203ENST00000528744 UBR1Q8IWV7 1749 aa17.84■□□□□ 0.45
SRPRA-203ENST00000528744 ALKQ9UM73 1620 aa17.84■□□□□ 0.45
SRPRA-203ENST00000528744 SLIT1O75093 1534 aa17.84■□□□□ 0.45
SRPRA-203ENST00000528744 STAG3Q9UJ98 1225 aa17.84■□□□□ 0.45
SRPRA-203ENST00000528744 LRRC7Q96NW7 1537 aa17.83■□□□□ 0.45
SRPRA-203ENST00000528744 ITGAEP38570 1179 aa17.83■□□□□ 0.44
SRPRA-203ENST00000528744 STRCP1A6NGW2 1772 aa17.82■□□□□ 0.44
SRPRA-203ENST00000528744 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
SRPRA-203ENST00000528744 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
SRPRA-203ENST00000528744 IQGAP1P46940 1657 aa17.8■□□□□ 0.44
SRPRA-203ENST00000528744 SYNMO15061 1565 aa17.8■□□□□ 0.44
SRPRA-203ENST00000528744 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
SRPRA-203ENST00000528744 SLC52A1Q9NWF4 448 aa17.8■□□□□ 0.44
SRPRA-203ENST00000528744 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
SRPRA-203ENST00000528744 EFCAB6Q5THR3 1501 aa17.76■□□□□ 0.43
SRPRA-203ENST00000528744 ROCK1Q13464 1354 aa17.76■□□□□ 0.43
SRPRA-203ENST00000528744 KCNA6P17658 529 aa17.75■□□□□ 0.43
SRPRA-203ENST00000528744 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
SRPRA-203ENST00000528744 TET3O43151 1660 aa17.74■□□□□ 0.43
SRPRA-203ENST00000528744 SOCS7O14512 581 aa17.72■□□□□ 0.43
SRPRA-203ENST00000528744 NUP155O75694 1391 aa17.71■□□□□ 0.43
SRPRA-203ENST00000528744 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
SRPRA-203ENST00000528744 TMEM94Q12767 1356 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms