RNA–Protein interactions for RNA: ENST00000528704.1

ATG13-212, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-212ENST00000528704 TMEM121BQ9BXQ6 578 aaPredicted RBP9.49□□□□□ -0.89
ATG13-212ENST00000528704 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
ATG13-212ENST00000528704 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
ATG13-212ENST00000528704 TIE1P35590 1138 aa9.48□□□□□ -0.89
ATG13-212ENST00000528704 ROCK1Q13464 1354 aa9.48□□□□□ -0.89
ATG13-212ENST00000528704 GRIN2AQ12879 1464 aa9.47□□□□□ -0.89
ATG13-212ENST00000528704 PTPN23Q9H3S7 1636 aa9.47□□□□□ -0.89
ATG13-212ENST00000528704 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
ATG13-212ENST00000528704 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
ATG13-212ENST00000528704 NAIPQ13075 1403 aa9.47□□□□□ -0.89
ATG13-212ENST00000528704 CCDC61Q9Y6R9 512 aa9.46□□□□□ -0.9
ATG13-212ENST00000528704 FAM69CQ0P6D2 419 aa9.44□□□□□ -0.9
ATG13-212ENST00000528704 KIAA0556O60303 1618 aa9.43□□□□□ -0.9
ATG13-212ENST00000528704 CLASP1Q7Z460 1538 aa9.43□□□□□ -0.9
ATG13-212ENST00000528704 SIN3AQ96ST3 1273 aa9.43□□□□□ -0.9
ATG13-212ENST00000528704 DISP1Q96F81 1524 aa9.42□□□□□ -0.9
ATG13-212ENST00000528704 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
ATG13-212ENST00000528704 YTHDC1Q96MU7 727 aaKnown RBP9.42□□□□□ -0.9
ATG13-212ENST00000528704 PLEKHD1A6NEE1 506 aa9.41□□□□□ -0.9
ATG13-212ENST00000528704 TTLL13PA6NNM8 815 aa9.41□□□□□ -0.9
ATG13-212ENST00000528704 CCER2I3L3R5 266 aa9.41□□□□□ -0.9
ATG13-212ENST00000528704 MARVELD3Q96A59 401 aa9.41□□□□□ -0.9
ATG13-212ENST00000528704 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
ATG13-212ENST00000528704 RAPGEF6Q8TEU7 1601 aa9.41□□□□□ -0.9
ATG13-212ENST00000528704 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
ATG13-212ENST00000528704 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.9
ATG13-212ENST00000528704 PTPRKQ15262 1439 aa9.4□□□□□ -0.9
ATG13-212ENST00000528704 ANP32CO43423 234 aa9.4□□□□□ -0.9
ATG13-212ENST00000528704 IER5LQ5T953 404 aa9.4□□□□□ -0.9
ATG13-212ENST00000528704 RSPH4AQ5TD94 716 aa9.4□□□□□ -0.9
ATG13-212ENST00000528704 NUP160Q12769 1436 aa9.39□□□□□ -0.91
ATG13-212ENST00000528704 LRRIQ1Q96JM4 1722 aa9.39□□□□□ -0.91
ATG13-212ENST00000528704 MPHOSPH9Q99550 1183 aa9.39□□□□□ -0.91
ATG13-212ENST00000528704 CFDP1Q9UEE9 299 aaPredicted RBP9.39□□□□□ -0.91
ATG13-212ENST00000528704 GCC2Q8IWJ2 1684 aa9.39□□□□□ -0.91
ATG13-212ENST00000528704 MAGI3Q5TCQ9 1506 aa9.38□□□□□ -0.91
ATG13-212ENST00000528704 RRP7BPQ9NSQ0 103 aa9.38□□□□□ -0.91
ATG13-212ENST00000528704 NUP153P49790 1475 aaKnown RBP9.38□□□□□ -0.91
ATG13-212ENST00000528704 DAPK1P53355 1430 aa9.38□□□□□ -0.91
ATG13-212ENST00000528704 MAP3K13O43283 966 aa9.37□□□□□ -0.91
ATG13-212ENST00000528704 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
ATG13-212ENST00000528704 ABCC10Q5T3U5 1492 aa9.36□□□□□ -0.91
ATG13-212ENST00000528704 SNPHO15079 494 aa9.36□□□□□ -0.91
ATG13-212ENST00000528704 SLC34A2O95436 690 aa9.36□□□□□ -0.91
ATG13-212ENST00000528704 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
ATG13-212ENST00000528704 TSPOAP1O95153 1857 aa9.35□□□□□ -0.91
ATG13-212ENST00000528704 HSPA2P54652 639 aa9.35□□□□□ -0.91
ATG13-212ENST00000528704 DDX10Q13206 875 aaKnown RBP9.35□□□□□ -0.91
ATG13-212ENST00000528704 TRIM35Q9UPQ4 493 aa9.35□□□□□ -0.91
ATG13-212ENST00000528704 ITSN2Q9NZM3 1697 aa9.35□□□□□ -0.91
ATG13-212ENST00000528704 ANKRD30AQ9BXX3 1397 aa9.35□□□□□ -0.91
ATG13-212ENST00000528704 ABCC5O15440 1437 aa9.34□□□□□ -0.91
ATG13-212ENST00000528704 TSPY4P0CV99 314 aa9.34□□□□□ -0.91
ATG13-212ENST00000528704 TSPY10P0CW01 314 aa9.34□□□□□ -0.91
ATG13-212ENST00000528704 EIF4G2P78344 907 aaKnown RBP eCLIP9.34□□□□□ -0.91
ATG13-212ENST00000528704 DNMT1P26358 1616 aaKnown RBP9.34□□□□□ -0.91
ATG13-212ENST00000528704 CEP170Q5SW79 1584 aa9.33□□□□□ -0.92
ATG13-212ENST00000528704 DIP2BQ9P265 1576 aa9.33□□□□□ -0.92
ATG13-212ENST00000528704 ADCY10Q96PN6 1610 aa9.32□□□□□ -0.92
ATG13-212ENST00000528704 PTPRGP23470 1445 aa9.31□□□□□ -0.92
ATG13-212ENST00000528704 GPATCH8Q9UKJ3 1502 aaKnown RBP9.31□□□□□ -0.92
ATG13-212ENST00000528704 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
ATG13-212ENST00000528704 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
ATG13-212ENST00000528704 ADGRL2O95490 1459 aa9.31□□□□□ -0.92
ATG13-212ENST00000528704 NCOA1Q15788 1441 aa9.31□□□□□ -0.92
ATG13-212ENST00000528704 ANKRD30BQ9BXX2 1392 aa9.3□□□□□ -0.92
ATG13-212ENST00000528704 PRG4Q92954 1404 aaPredicted RBP9.3□□□□□ -0.92
ATG13-212ENST00000528704 ABCA8O94911 1581 aa9.29□□□□□ -0.92
ATG13-212ENST00000528704 CAMSAP2Q08AD1 1489 aa9.29□□□□□ -0.92
ATG13-212ENST00000528704 SHANK2Q9UPX8 1470 aa9.29□□□□□ -0.92
ATG13-212ENST00000528704 ARID4BQ4LE39 1312 aaPredicted RBP9.29□□□□□ -0.92
ATG13-212ENST00000528704 RPRD2Q5VT52 1461 aaKnown RBP9.28□□□□□ -0.92
ATG13-212ENST00000528704 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
ATG13-212ENST00000528704 ARID3CA6NKF2 412 aa9.28□□□□□ -0.92
ATG13-212ENST00000528704 PLCG2P16885 1265 aa9.28□□□□□ -0.92
ATG13-212ENST00000528704 KIF14Q15058 1648 aa9.27□□□□□ -0.92
ATG13-212ENST00000528704 EMP3P54852 163 aa9.27□□□□□ -0.93
ATG13-212ENST00000528704 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
ATG13-212ENST00000528704 ZNF777Q9ULD5 760 aaPredicted RBP9.27□□□□□ -0.93
ATG13-212ENST00000528704 ATP10BO94823 1461 aa9.27□□□□□ -0.93
ATG13-212ENST00000528704 KIAA1107Q9UPP5 1409 aa9.26□□□□□ -0.93
ATG13-212ENST00000528704 SPDYE4A6NLX3 237 aa9.26□□□□□ -0.93
ATG13-212ENST00000528704 PLEKHH2Q8IVE3 1493 aa9.26□□□□□ -0.93
ATG13-212ENST00000528704 ZNF644Q9H582 1327 aaPredicted RBP9.26□□□□□ -0.93
ATG13-212ENST00000528704 ADGBQ8N7X0 1667 aa9.26□□□□□ -0.93
ATG13-212ENST00000528704 ANKRD50Q9ULJ7 1429 aa9.25□□□□□ -0.93
ATG13-212ENST00000528704 NEFLP07196 543 aa9.25□□□□□ -0.93
ATG13-212ENST00000528704 HSPA5P11021 654 aaKnown RBP9.25□□□□□ -0.93
ATG13-212ENST00000528704 COL17A1Q9UMD9 1497 aaPredicted RBP9.24□□□□□ -0.93
ATG13-212ENST00000528704 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
ATG13-212ENST00000528704 PTPRMP28827 1452 aa9.23□□□□□ -0.93
ATG13-212ENST00000528704 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
ATG13-212ENST00000528704 C9orf84Q5VXU9 1444 aa9.22□□□□□ -0.93
ATG13-212ENST00000528704 DENND4BO75064 1496 aaPredicted RBP9.22□□□□□ -0.93
ATG13-212ENST00000528704 KDM5BQ9UGL1 1544 aa9.22□□□□□ -0.93
ATG13-212ENST00000528704 PKD2Q13563 968 aa9.22□□□□□ -0.93
ATG13-212ENST00000528704 LTBP4Q8N2S1 1624 aa9.22□□□□□ -0.93
ATG13-212ENST00000528704 SETD1AO15047 1707 aaKnown RBP9.22□□□□□ -0.93
ATG13-212ENST00000528704 POTEB3A0JP26 581 aa9.21□□□□□ -0.94
ATG13-212ENST00000528704 POTEBQ6S5H4 581 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms