RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 PTPRKQ15262 1439 aa21.71■■□□□ 1.07
CHRDL2-205ENST00000528471 FGD6Q6ZV73 1430 aa21.69■■□□□ 1.06
CHRDL2-205ENST00000528471 CEP170BQ9Y4F5 1589 aaPredicted RBP21.69■■□□□ 1.06
CHRDL2-205ENST00000528471 DNMT1P26358 1616 aaKnown RBP21.68■■□□□ 1.06
CHRDL2-205ENST00000528471 ZC3H13Q5T200 1668 aaKnown RBP21.68■■□□□ 1.06
CHRDL2-205ENST00000528471 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
CHRDL2-205ENST00000528471 SHANK2Q9UPX8 1470 aa21.68■■□□□ 1.06
CHRDL2-205ENST00000528471 CAMSAP1Q5T5Y3 1602 aa21.68■■□□□ 1.06
CHRDL2-205ENST00000528471 DUOX2Q9NRD8 1548 aa21.66■■□□□ 1.06
CHRDL2-205ENST00000528471 NCOA1Q15788 1441 aa21.65■■□□□ 1.06
CHRDL2-205ENST00000528471 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
CHRDL2-205ENST00000528471 WASHC2CQ9Y4E1 1318 aa21.65■■□□□ 1.06
CHRDL2-205ENST00000528471 PZPP20742 1482 aa21.63■■□□□ 1.05
CHRDL2-205ENST00000528471 FBXO41Q8TF61 875 aa21.63■■□□□ 1.05
CHRDL2-205ENST00000528471 CEP152O94986 1710 aa21.63■■□□□ 1.05
CHRDL2-205ENST00000528471 ABCC5O15440 1437 aa21.63■■□□□ 1.05
CHRDL2-205ENST00000528471 DAPK1P53355 1430 aa21.63■■□□□ 1.05
CHRDL2-205ENST00000528471 PTPRTO14522 1441 aa21.61■■□□□ 1.05
CHRDL2-205ENST00000528471 KIF15Q9NS87 1388 aa21.6■■□□□ 1.05
CHRDL2-205ENST00000528471 ABCC3O15438 1527 aa21.6■■□□□ 1.05
CHRDL2-205ENST00000528471 MROH1Q8NDA8 1641 aa21.6■■□□□ 1.05
CHRDL2-205ENST00000528471 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.05
CHRDL2-205ENST00000528471 TNRQ92752 1358 aa21.58■■□□□ 1.05
CHRDL2-205ENST00000528471 CFAP65Q6ZU64 1925 aaKnown RBP21.58■■□□□ 1.05
CHRDL2-205ENST00000528471 PLA2R1Q13018 1463 aa21.58■■□□□ 1.04
CHRDL2-205ENST00000528471 ERBINQ96RT1 1412 aa21.57■■□□□ 1.04
CHRDL2-205ENST00000528471 POLR1AO95602 1720 aaPredicted RBP21.56■■□□□ 1.04
CHRDL2-205ENST00000528471 CERKQ8TCT0 537 aa21.55■■□□□ 1.04
CHRDL2-205ENST00000528471 PRDM15P57071 1507 aaPredicted RBP21.55■■□□□ 1.04
CHRDL2-205ENST00000528471 FBXO31Q5XUX0 539 aaPredicted RBP21.55■■□□□ 1.04
CHRDL2-205ENST00000528471 RRP7BPQ9NSQ0 103 aa21.55■■□□□ 1.04
CHRDL2-205ENST00000528471 DEPDC5O75140 1603 aa21.53■■□□□ 1.04
CHRDL2-205ENST00000528471 ANKRD30AQ9BXX3 1397 aa21.53■■□□□ 1.04
CHRDL2-205ENST00000528471 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.03
CHRDL2-205ENST00000528471 NLRP1Q9C000 1473 aa21.51■■□□□ 1.03
CHRDL2-205ENST00000528471 NCKAP5LQ9HCH0 1330 aa21.51■■□□□ 1.03
CHRDL2-205ENST00000528471 SPATA31D1Q6ZQQ2 1576 aa21.5■■□□□ 1.03
CHRDL2-205ENST00000528471 PKD2Q13563 968 aa21.5■■□□□ 1.03
CHRDL2-205ENST00000528471 CHIC2Q9UKJ5 165 aa21.5■■□□□ 1.03
CHRDL2-205ENST00000528471 ERVK-7P63135 1459 aa21.48■■□□□ 1.03
CHRDL2-205ENST00000528471 UGGT1Q9NYU2 1555 aa21.48■■□□□ 1.03
CHRDL2-205ENST00000528471 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
CHRDL2-205ENST00000528471 LTBP4Q8N2S1 1624 aa21.46■■□□□ 1.03
CHRDL2-205ENST00000528471 KANK1Q14678 1352 aa21.45■■□□□ 1.02
CHRDL2-205ENST00000528471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.45■■□□□ 1.02
CHRDL2-205ENST00000528471 NEURL4Q96JN8 1562 aa21.42■■□□□ 1.02
CHRDL2-205ENST00000528471 THEMISQ8N1K5 641 aaPredicted RBP21.41■■□□□ 1.02
CHRDL2-205ENST00000528471 UBR1Q8IWV7 1749 aa21.41■■□□□ 1.02
CHRDL2-205ENST00000528471 ARHGAP31Q2M1Z3 1444 aa21.4■■□□□ 1.02
CHRDL2-205ENST00000528471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.4■■□□□ 1.02
CHRDL2-205ENST00000528471 VWDEQ8N2E2 1590 aa21.39■■□□□ 1.01
CHRDL2-205ENST00000528471 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
CHRDL2-205ENST00000528471 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
CHRDL2-205ENST00000528471 LMTK2Q8IWU2 1503 aa21.38■■□□□ 1.01
CHRDL2-205ENST00000528471 ANKRD50Q9ULJ7 1429 aa21.37■■□□□ 1.01
CHRDL2-205ENST00000528471 ANKLE2Q86XL3 938 aa21.36■■□□□ 1.01
CHRDL2-205ENST00000528471 EFCAB6Q5THR3 1501 aa21.36■■□□□ 1.01
CHRDL2-205ENST00000528471 IQGAP1P46940 1657 aa21.36■■□□□ 1.01
CHRDL2-205ENST00000528471 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
CHRDL2-205ENST00000528471 PIK3C2BO00750 1634 aa21.34■■□□□ 1.01
CHRDL2-205ENST00000528471 NPHP4O75161 1426 aaPredicted RBP21.32■■□□□ 1
CHRDL2-205ENST00000528471 UNC13BO14795 1591 aa21.31■■□□□ 1
CHRDL2-205ENST00000528471 MED14O60244 1454 aa21.31■■□□□ 1
CHRDL2-205ENST00000528471 TET3O43151 1660 aa21.31■■□□□ 1
CHRDL2-205ENST00000528471 GCC2Q8IWJ2 1684 aa21.31■■□□□ 1
CHRDL2-205ENST00000528471 KDM5AP29375 1690 aaKnown RBP21.3■■□□□ 1
CHRDL2-205ENST00000528471 ROCK1Q13464 1354 aa21.3■■□□□ 1
CHRDL2-205ENST00000528471 SYNMO15061 1565 aa21.29■■□□□ 1
CHRDL2-205ENST00000528471 ITGAEP38570 1179 aa21.28■■□□□ 1
CHRDL2-205ENST00000528471 CPS1P31327 1500 aa21.27■■□□□ 1
CHRDL2-205ENST00000528471 SCAF11Q99590 1463 aaKnown RBP21.26■□□□□ 0.99
CHRDL2-205ENST00000528471 SLIT1O75093 1534 aa21.26■□□□□ 0.99
CHRDL2-205ENST00000528471 RPRD2Q5VT52 1461 aaKnown RBP21.25■□□□□ 0.99
CHRDL2-205ENST00000528471 STAG3Q9UJ98 1225 aa21.25■□□□□ 0.99
CHRDL2-205ENST00000528471 ARHGAP23Q9P227 1491 aa21.24■□□□□ 0.99
CHRDL2-205ENST00000528471 NOS1P29475 1434 aa21.23■□□□□ 0.99
CHRDL2-205ENST00000528471 IQGAP3Q86VI3 1631 aa21.23■□□□□ 0.99
CHRDL2-205ENST00000528471 ADGRB3O60242 1522 aa21.22■□□□□ 0.99
CHRDL2-205ENST00000528471 MYO5BQ9ULV0 1848 aa21.21■□□□□ 0.99
CHRDL2-205ENST00000528471 E9PCH4 1651 aa21.21■□□□□ 0.99
CHRDL2-205ENST00000528471 STRCP1A6NGW2 1772 aa21.2■□□□□ 0.98
CHRDL2-205ENST00000528471 EID1Q9Y6B2 187 aa21.2■□□□□ 0.98
CHRDL2-205ENST00000528471 UBAP1LF5GYI3 381 aa21.19■□□□□ 0.98
CHRDL2-205ENST00000528471 TXNDC2Q86VQ3 553 aa21.19■□□□□ 0.98
CHRDL2-205ENST00000528471 RRBP1Q9P2E9 1410 aaKnown RBP21.19■□□□□ 0.98
CHRDL2-205ENST00000528471 TMEM2Q9UHN6 1383 aa21.18■□□□□ 0.98
CHRDL2-205ENST00000528471 IDI1Q13907 227 aa21.18■□□□□ 0.98
CHRDL2-205ENST00000528471 LTKP29376 864 aa21.15■□□□□ 0.98
CHRDL2-205ENST00000528471 SLC52A1Q9NWF4 448 aa21.15■□□□□ 0.98
CHRDL2-205ENST00000528471 NUP155O75694 1391 aa21.13■□□□□ 0.97
CHRDL2-205ENST00000528471 TMEM131LA2VDJ0 1609 aa21.11■□□□□ 0.97
CHRDL2-205ENST00000528471 SPHKAPQ2M3C7 1700 aa21.1■□□□□ 0.97
CHRDL2-205ENST00000528471 LRRC7Q96NW7 1537 aa21.09■□□□□ 0.97
CHRDL2-205ENST00000528471 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
CHRDL2-205ENST00000528471 TOM1O60784 492 aa21.07■□□□□ 0.96
CHRDL2-205ENST00000528471 XIRP1Q702N8 1843 aaKnown RBP21.06■□□□□ 0.96
CHRDL2-205ENST00000528471 CHGAP10645 457 aaKnown RBP21.04■□□□□ 0.96
CHRDL2-205ENST00000528471 PIP4K2BP78356 416 aa21.04■□□□□ 0.96
CHRDL2-205ENST00000528471 BCANQ96GW7 911 aa21.04■□□□□ 0.96
CHRDL2-205ENST00000528471 ZFYVE9O95405 1425 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms