RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 LRRC9Q6ZRR7 1453 aa5.79□□□□□ -1.48
PTPN22-207ENST00000528414 UBTFP17480 764 aaKnown RBP5.78□□□□□ -1.48
PTPN22-207ENST00000528414 NHSL1Q5SYE7 1610 aa5.78□□□□□ -1.48
PTPN22-207ENST00000528414 NCOA3Q9Y6Q9 1424 aa5.78□□□□□ -1.48
PTPN22-207ENST00000528414 PTPRGP23470 1445 aa5.78□□□□□ -1.48
PTPN22-207ENST00000528414 YEATS2Q9ULM3 1422 aa5.78□□□□□ -1.48
PTPN22-207ENST00000528414 HAP1P54257 671 aaPredicted RBP5.78□□□□□ -1.48
PTPN22-207ENST00000528414 DNMT1P26358 1616 aaKnown RBP5.77□□□□□ -1.49
PTPN22-207ENST00000528414 IQGAP1P46940 1657 aa5.77□□□□□ -1.49
PTPN22-207ENST00000528414 PKNOX2Q96KN3 472 aa5.77□□□□□ -1.49
PTPN22-207ENST00000528414 MARF1Q9Y4F3 1742 aaKnown RBP5.77□□□□□ -1.49
PTPN22-207ENST00000528414 AHDC1Q5TGY3 1603 aaPredicted RBP5.77□□□□□ -1.49
PTPN22-207ENST00000528414 DHX37Q8IY37 1157 aaKnown RBP5.77□□□□□ -1.49
PTPN22-207ENST00000528414 ZNF518AQ6AHZ1 1483 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 SAMD9LQ8IVG5 1584 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 ATP7AQ04656 1500 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 NUP153P49790 1475 aaKnown RBP5.76□□□□□ -1.49
PTPN22-207ENST00000528414 RTEL1-TNFRSF6BF6WH68 1400 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 CNKSR2Q8WXI2 1034 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 MAP3K1Q13233 1512 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 ARHGAP23Q9P227 1491 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 UBR1Q8IWV7 1749 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 KIAA1107Q9UPP5 1409 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 STRCP1A6NGW2 1772 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 PIK3C2BO00750 1634 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 FGD6Q6ZV73 1430 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 EFCAB6Q5THR3 1501 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 DENND4BO75064 1496 aaPredicted RBP5.74□□□□□ -1.49
PTPN22-207ENST00000528414 CCDC18Q5T9S5 1454 aa5.74□□□□□ -1.49
PTPN22-207ENST00000528414 PLCH2O75038 1416 aa5.74□□□□□ -1.49
PTPN22-207ENST00000528414 CHMP7Q8WUX9 453 aaPredicted RBP5.73□□□□□ -1.49
PTPN22-207ENST00000528414 SUPT5HO00267 1087 aaKnown RBP5.73□□□□□ -1.49
PTPN22-207ENST00000528414 SOCS7O14512 581 aa5.73□□□□□ -1.49
PTPN22-207ENST00000528414 KDM2AQ9Y2K7 1162 aa5.73□□□□□ -1.49
PTPN22-207ENST00000528414 SCAF1Q9H7N4 1312 aaKnown RBP5.73□□□□□ -1.49
PTPN22-207ENST00000528414 UNC13BO14795 1591 aa5.73□□□□□ -1.49
PTPN22-207ENST00000528414 JPH4Q96JJ6 628 aa5.73□□□□□ -1.49
PTPN22-207ENST00000528414 GPATCH8Q9UKJ3 1502 aaKnown RBP5.72□□□□□ -1.49
PTPN22-207ENST00000528414 CYB5RLQ6IPT4 315 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 A2ML1A8K2U0 1454 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 NLRP1Q9C000 1473 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 TAF7LQ5H9L4 462 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 TET3O43151 1660 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 PRDM15P57071 1507 aaPredicted RBP5.71□□□□□ -1.49
PTPN22-207ENST00000528414 BRD2P25440 801 aaKnown RBP5.71□□□□□ -1.5
PTPN22-207ENST00000528414 BCL11BQ9C0K0 894 aaPredicted RBP5.71□□□□□ -1.5
PTPN22-207ENST00000528414 IGSF3O75054 1194 aa5.71□□□□□ -1.5
PTPN22-207ENST00000528414 QSER1Q2KHR3 1735 aa5.7□□□□□ -1.5
PTPN22-207ENST00000528414 ARHGAP31Q2M1Z3 1444 aa5.7□□□□□ -1.5
PTPN22-207ENST00000528414 ANO8Q9HCE9 1232 aaPredicted RBP5.69□□□□□ -1.5
PTPN22-207ENST00000528414 NEXMIFQ5QGS0 1516 aa5.69□□□□□ -1.5
PTPN22-207ENST00000528414 FGD1P98174 961 aa5.69□□□□□ -1.5
PTPN22-207ENST00000528414 GCC2Q8IWJ2 1684 aa5.69□□□□□ -1.5
PTPN22-207ENST00000528414 NKTRP30414 1462 aaKnown RBP5.69□□□□□ -1.5
PTPN22-207ENST00000528414 CHD2O14647 1828 aaKnown RBP5.69□□□□□ -1.5
PTPN22-207ENST00000528414 CLTCQ00610 1675 aaKnown RBP5.68□□□□□ -1.5
PTPN22-207ENST00000528414 SLC4A1APQ9BWU0 796 aaKnown RBP5.68□□□□□ -1.5
PTPN22-207ENST00000528414 NEFLP07196 543 aa5.68□□□□□ -1.5
PTPN22-207ENST00000528414 PZPP20742 1482 aa5.68□□□□□ -1.5
PTPN22-207ENST00000528414 TRAPPC8Q9Y2L5 1435 aa5.68□□□□□ -1.5
PTPN22-207ENST00000528414 TIAM1Q13009 1591 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 KNDC1Q76NI1 1749 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 CAMSAP1Q5T5Y3 1602 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 CARMIL1Q5VZK9 1371 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 SHANK2Q9UPX8 1470 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 DCAF8L2P0C7V8 631 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 VSIG10Q8N0Z9 540 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 XRN1Q8IZH2 1706 aaKnown RBP5.67□□□□□ -1.5
PTPN22-207ENST00000528414 COL16A1Q07092 1604 aaPredicted RBP5.65□□□□□ -1.5
PTPN22-207ENST00000528414 PTPRKQ15262 1439 aa5.65□□□□□ -1.5
PTPN22-207ENST00000528414 ZBTB22O15209 634 aa5.65□□□□□ -1.51
PTPN22-207ENST00000528414 FBLN2P98095 1184 aa5.64□□□□□ -1.51
PTPN22-207ENST00000528414 DMRT2Q9Y5R5 561 aa5.64□□□□□ -1.51
PTPN22-207ENST00000528414 FYCO1Q9BQS8 1478 aa5.64□□□□□ -1.51
PTPN22-207ENST00000528414 TMEM131LA2VDJ0 1609 aa5.64□□□□□ -1.51
PTPN22-207ENST00000528414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.63□□□□□ -1.51
PTPN22-207ENST00000528414 RREB1Q92766 1687 aa5.63□□□□□ -1.51
PTPN22-207ENST00000528414 UHRF1BP1Q6BDS2 1440 aa5.62□□□□□ -1.51
PTPN22-207ENST00000528414 USP54Q70EL1 1684 aa5.62□□□□□ -1.51
PTPN22-207ENST00000528414 CRYBG1Q9Y4K1 1723 aa5.62□□□□□ -1.51
PTPN22-207ENST00000528414 NWD2Q9ULI1 1742 aa5.62□□□□□ -1.51
PTPN22-207ENST00000528414 DUOX2Q9NRD8 1548 aa5.61□□□□□ -1.51
PTPN22-207ENST00000528414 CDK11BP21127 795 aaKnown RBP5.61□□□□□ -1.51
PTPN22-207ENST00000528414 CDK11AQ9UQ88 783 aaPredicted RBP5.61□□□□□ -1.51
PTPN22-207ENST00000528414 ADGRB3O60242 1522 aa5.61□□□□□ -1.51
PTPN22-207ENST00000528414 LRP6O75581 1613 aa5.61□□□□□ -1.51
PTPN22-207ENST00000528414 SYCP2Q9BX26 1530 aa5.61□□□□□ -1.51
PTPN22-207ENST00000528414 DCCP43146 1447 aa5.6□□□□□ -1.51
PTPN22-207ENST00000528414 CEP152O94986 1710 aa5.6□□□□□ -1.51
PTPN22-207ENST00000528414 RSPH4AQ5TD94 716 aa5.6□□□□□ -1.51
PTPN22-207ENST00000528414 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
PTPN22-207ENST00000528414 EHBP1L1Q8N3D4 1523 aa5.59□□□□□ -1.51
PTPN22-207ENST00000528414 FAM69CQ0P6D2 419 aa5.59□□□□□ -1.51
PTPN22-207ENST00000528414 ABCA3Q99758 1704 aa5.58□□□□□ -1.52
PTPN22-207ENST00000528414 TROQ12816 1431 aaPredicted RBP5.58□□□□□ -1.52
PTPN22-207ENST00000528414 RPRD2Q5VT52 1461 aaKnown RBP5.58□□□□□ -1.52
PTPN22-207ENST00000528414 TRPM1Q7Z4N2 1603 aa5.58□□□□□ -1.52
PTPN22-207ENST00000528414 WNK3Q9BYP7 1800 aa5.57□□□□□ -1.52
PTPN22-207ENST00000528414 FAM135BQ49AJ0 1406 aa5.57□□□□□ -1.52
PTPN22-207ENST00000528414 SETBP1Q9Y6X0 1596 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms