RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 LRRC9Q6ZRR7 1453 aa5.79□□□□□ -1.48
PTPN22-207ENST00000528414 UBTFP17480 764 aaKnown RBP5.78□□□□□ -1.48
PTPN22-207ENST00000528414 NHSL1Q5SYE7 1610 aa5.78□□□□□ -1.48
PTPN22-207ENST00000528414 NCOA3Q9Y6Q9 1424 aa5.78□□□□□ -1.48
PTPN22-207ENST00000528414 PTPRGP23470 1445 aa5.78□□□□□ -1.48
PTPN22-207ENST00000528414 YEATS2Q9ULM3 1422 aa5.78□□□□□ -1.48
PTPN22-207ENST00000528414 HAP1P54257 671 aaPredicted RBP5.78□□□□□ -1.48
PTPN22-207ENST00000528414 DNMT1P26358 1616 aaKnown RBP5.77□□□□□ -1.49
PTPN22-207ENST00000528414 IQGAP1P46940 1657 aa5.77□□□□□ -1.49
PTPN22-207ENST00000528414 PKNOX2Q96KN3 472 aa5.77□□□□□ -1.49
PTPN22-207ENST00000528414 MARF1Q9Y4F3 1742 aaKnown RBP5.77□□□□□ -1.49
PTPN22-207ENST00000528414 AHDC1Q5TGY3 1603 aaPredicted RBP5.77□□□□□ -1.49
PTPN22-207ENST00000528414 DHX37Q8IY37 1157 aaKnown RBP5.77□□□□□ -1.49
PTPN22-207ENST00000528414 ZNF518AQ6AHZ1 1483 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 SAMD9LQ8IVG5 1584 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 ATP7AQ04656 1500 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 NUP153P49790 1475 aaKnown RBP5.76□□□□□ -1.49
PTPN22-207ENST00000528414 RTEL1-TNFRSF6BF6WH68 1400 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 CNKSR2Q8WXI2 1034 aa5.76□□□□□ -1.49
PTPN22-207ENST00000528414 MAP3K1Q13233 1512 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 ARHGAP23Q9P227 1491 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 UBR1Q8IWV7 1749 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 KIAA1107Q9UPP5 1409 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 STRCP1A6NGW2 1772 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 PIK3C2BO00750 1634 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 FGD6Q6ZV73 1430 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 EFCAB6Q5THR3 1501 aa5.75□□□□□ -1.49
PTPN22-207ENST00000528414 DENND4BO75064 1496 aaPredicted RBP5.74□□□□□ -1.49
PTPN22-207ENST00000528414 CCDC18Q5T9S5 1454 aa5.74□□□□□ -1.49
PTPN22-207ENST00000528414 PLCH2O75038 1416 aa5.74□□□□□ -1.49
PTPN22-207ENST00000528414 CHMP7Q8WUX9 453 aaPredicted RBP5.73□□□□□ -1.49
PTPN22-207ENST00000528414 SUPT5HO00267 1087 aaKnown RBP5.73□□□□□ -1.49
PTPN22-207ENST00000528414 SOCS7O14512 581 aa5.73□□□□□ -1.49
PTPN22-207ENST00000528414 KDM2AQ9Y2K7 1162 aa5.73□□□□□ -1.49
PTPN22-207ENST00000528414 SCAF1Q9H7N4 1312 aaKnown RBP5.73□□□□□ -1.49
PTPN22-207ENST00000528414 UNC13BO14795 1591 aa5.73□□□□□ -1.49
PTPN22-207ENST00000528414 JPH4Q96JJ6 628 aa5.73□□□□□ -1.49
PTPN22-207ENST00000528414 GPATCH8Q9UKJ3 1502 aaKnown RBP5.72□□□□□ -1.49
PTPN22-207ENST00000528414 CYB5RLQ6IPT4 315 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 A2ML1A8K2U0 1454 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 NLRP1Q9C000 1473 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 TAF7LQ5H9L4 462 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 TET3O43151 1660 aa5.72□□□□□ -1.49
PTPN22-207ENST00000528414 PRDM15P57071 1507 aaPredicted RBP5.71□□□□□ -1.49
PTPN22-207ENST00000528414 BRD2P25440 801 aaKnown RBP5.71□□□□□ -1.5
PTPN22-207ENST00000528414 BCL11BQ9C0K0 894 aaPredicted RBP5.71□□□□□ -1.5
PTPN22-207ENST00000528414 IGSF3O75054 1194 aa5.71□□□□□ -1.5
PTPN22-207ENST00000528414 QSER1Q2KHR3 1735 aa5.7□□□□□ -1.5
PTPN22-207ENST00000528414 ARHGAP31Q2M1Z3 1444 aa5.7□□□□□ -1.5
PTPN22-207ENST00000528414 ANO8Q9HCE9 1232 aaPredicted RBP5.69□□□□□ -1.5
PTPN22-207ENST00000528414 NEXMIFQ5QGS0 1516 aa5.69□□□□□ -1.5
PTPN22-207ENST00000528414 FGD1P98174 961 aa5.69□□□□□ -1.5
PTPN22-207ENST00000528414 GCC2Q8IWJ2 1684 aa5.69□□□□□ -1.5
PTPN22-207ENST00000528414 NKTRP30414 1462 aaKnown RBP5.69□□□□□ -1.5
PTPN22-207ENST00000528414 CHD2O14647 1828 aaKnown RBP5.69□□□□□ -1.5
PTPN22-207ENST00000528414 CLTCQ00610 1675 aaKnown RBP5.68□□□□□ -1.5
PTPN22-207ENST00000528414 SLC4A1APQ9BWU0 796 aaKnown RBP5.68□□□□□ -1.5
PTPN22-207ENST00000528414 NEFLP07196 543 aa5.68□□□□□ -1.5
PTPN22-207ENST00000528414 PZPP20742 1482 aa5.68□□□□□ -1.5
PTPN22-207ENST00000528414 TRAPPC8Q9Y2L5 1435 aa5.68□□□□□ -1.5
PTPN22-207ENST00000528414 TIAM1Q13009 1591 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 KNDC1Q76NI1 1749 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 CAMSAP1Q5T5Y3 1602 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 CARMIL1Q5VZK9 1371 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 SHANK2Q9UPX8 1470 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 DCAF8L2P0C7V8 631 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 VSIG10Q8N0Z9 540 aa5.67□□□□□ -1.5
PTPN22-207ENST00000528414 XRN1Q8IZH2 1706 aaKnown RBP5.67□□□□□ -1.5
PTPN22-207ENST00000528414 COL16A1Q07092 1604 aaPredicted RBP5.65□□□□□ -1.5
PTPN22-207ENST00000528414 PTPRKQ15262 1439 aa5.65□□□□□ -1.5
PTPN22-207ENST00000528414 ZBTB22O15209 634 aa5.65□□□□□ -1.51
PTPN22-207ENST00000528414 FBLN2P98095 1184 aa5.64□□□□□ -1.51
PTPN22-207ENST00000528414 DMRT2Q9Y5R5 561 aa5.64□□□□□ -1.51
PTPN22-207ENST00000528414 FYCO1Q9BQS8 1478 aa5.64□□□□□ -1.51
PTPN22-207ENST00000528414 TMEM131LA2VDJ0 1609 aa5.64□□□□□ -1.51
PTPN22-207ENST00000528414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.63□□□□□ -1.51
PTPN22-207ENST00000528414 RREB1Q92766 1687 aa5.63□□□□□ -1.51
PTPN22-207ENST00000528414 UHRF1BP1Q6BDS2 1440 aa5.62□□□□□ -1.51
PTPN22-207ENST00000528414 USP54Q70EL1 1684 aa5.62□□□□□ -1.51
PTPN22-207ENST00000528414 CRYBG1Q9Y4K1 1723 aa5.62□□□□□ -1.51
PTPN22-207ENST00000528414 NWD2Q9ULI1 1742 aa5.62□□□□□ -1.51
PTPN22-207ENST00000528414 DUOX2Q9NRD8 1548 aa5.61□□□□□ -1.51
PTPN22-207ENST00000528414 CDK11BP21127 795 aaKnown RBP5.61□□□□□ -1.51
PTPN22-207ENST00000528414 CDK11AQ9UQ88 783 aaPredicted RBP5.61□□□□□ -1.51
PTPN22-207ENST00000528414 ADGRB3O60242 1522 aa5.61□□□□□ -1.51
PTPN22-207ENST00000528414 LRP6O75581 1613 aa5.61□□□□□ -1.51
PTPN22-207ENST00000528414 SYCP2Q9BX26 1530 aa5.61□□□□□ -1.51
PTPN22-207ENST00000528414 DCCP43146 1447 aa5.6□□□□□ -1.51
PTPN22-207ENST00000528414 CEP152O94986 1710 aa5.6□□□□□ -1.51
PTPN22-207ENST00000528414 RSPH4AQ5TD94 716 aa5.6□□□□□ -1.51
PTPN22-207ENST00000528414 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
PTPN22-207ENST00000528414 EHBP1L1Q8N3D4 1523 aa5.59□□□□□ -1.51
PTPN22-207ENST00000528414 FAM69CQ0P6D2 419 aa5.59□□□□□ -1.51
PTPN22-207ENST00000528414 ABCA3Q99758 1704 aa5.58□□□□□ -1.52
PTPN22-207ENST00000528414 TROQ12816 1431 aaPredicted RBP5.58□□□□□ -1.52
PTPN22-207ENST00000528414 RPRD2Q5VT52 1461 aaKnown RBP5.58□□□□□ -1.52
PTPN22-207ENST00000528414 TRPM1Q7Z4N2 1603 aa5.58□□□□□ -1.52
PTPN22-207ENST00000528414 WNK3Q9BYP7 1800 aa5.57□□□□□ -1.52
PTPN22-207ENST00000528414 FAM135BQ49AJ0 1406 aa5.57□□□□□ -1.52
PTPN22-207ENST00000528414 SETBP1Q9Y6X0 1596 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms