RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PKD2Q13563 968 aa24.5■■□□□ 1.51
CLNS1A-210ENST00000528364 MAP3K1Q13233 1512 aa24.5■■□□□ 1.51
CLNS1A-210ENST00000528364 ZNF335Q9H4Z2 1342 aaPredicted RBP24.49■■□□□ 1.51
CLNS1A-210ENST00000528364 ZNF142P52746 1687 aaPredicted RBP24.48■■□□□ 1.51
CLNS1A-210ENST00000528364 MYOM3Q5VTT5 1437 aa24.47■■□□□ 1.51
CLNS1A-210ENST00000528364 TNRQ92752 1358 aa24.47■■□□□ 1.51
CLNS1A-210ENST00000528364 A2ML1A8K2U0 1454 aa24.46■■□□□ 1.51
CLNS1A-210ENST00000528364 PLA2R1Q13018 1463 aa24.45■■□□□ 1.51
CLNS1A-210ENST00000528364 KDM5DQ9BY66 1539 aa24.45■■□□□ 1.5
CLNS1A-210ENST00000528364 TCOF1Q13428 1488 aaKnown RBP24.45■■□□□ 1.5
CLNS1A-210ENST00000528364 MIA2Q96PC5 1412 aa24.44■■□□□ 1.5
CLNS1A-210ENST00000528364 DNMT1P26358 1616 aaKnown RBP24.43■■□□□ 1.5
CLNS1A-210ENST00000528364 PZPP20742 1482 aa24.43■■□□□ 1.5
CLNS1A-210ENST00000528364 APLP2Q06481 763 aa24.42■■□□□ 1.5
CLNS1A-210ENST00000528364 MAST1Q9Y2H9 1570 aa24.4■■□□□ 1.5
CLNS1A-210ENST00000528364 FAM135AQ9P2D6 1515 aa24.36■■□□□ 1.49
CLNS1A-210ENST00000528364 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
CLNS1A-210ENST00000528364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.36■■□□□ 1.49
CLNS1A-210ENST00000528364 ABCC5O15440 1437 aa24.35■■□□□ 1.49
CLNS1A-210ENST00000528364 THEMISQ8N1K5 641 aaPredicted RBP24.34■■□□□ 1.49
CLNS1A-210ENST00000528364 RNF17Q9BXT8 1623 aaKnown RBP24.33■■□□□ 1.49
CLNS1A-210ENST00000528364 ANKLE2Q86XL3 938 aa24.33■■□□□ 1.49
CLNS1A-210ENST00000528364 ABCC3O15438 1527 aa24.33■■□□□ 1.49
CLNS1A-210ENST00000528364 IQSEC2Q5JU85 1478 aa24.32■■□□□ 1.48
CLNS1A-210ENST00000528364 UBAP1LF5GYI3 381 aa24.32■■□□□ 1.48
CLNS1A-210ENST00000528364 CFAP65Q6ZU64 1925 aaKnown RBP24.31■■□□□ 1.48
CLNS1A-210ENST00000528364 CHIC2Q9UKJ5 165 aa24.3■■□□□ 1.48
CLNS1A-210ENST00000528364 KIF15Q9NS87 1388 aa24.29■■□□□ 1.48
CLNS1A-210ENST00000528364 MROH1Q8NDA8 1641 aa24.29■■□□□ 1.48
CLNS1A-210ENST00000528364 PTPN23Q9H3S7 1636 aa24.29■■□□□ 1.48
CLNS1A-210ENST00000528364 NLRP1Q9C000 1473 aa24.29■■□□□ 1.48
CLNS1A-210ENST00000528364 DUOX2Q9NRD8 1548 aa24.29■■□□□ 1.48
CLNS1A-210ENST00000528364 NEURL4Q96JN8 1562 aa24.29■■□□□ 1.48
CLNS1A-210ENST00000528364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.28■■□□□ 1.488e-8■■■□□ 16.5
CLNS1A-210ENST00000528364 UGGT1Q9NYU2 1555 aa24.28■■□□□ 1.48
CLNS1A-210ENST00000528364 EIF2AK4Q9P2K8 1649 aaKnown RBP24.27■■□□□ 1.48
CLNS1A-210ENST00000528364 FGD6Q6ZV73 1430 aa24.26■■□□□ 1.47
CLNS1A-210ENST00000528364 DISP3Q9P2K9 1392 aa24.25■■□□□ 1.47
CLNS1A-210ENST00000528364 DAPK1P53355 1430 aa24.25■■□□□ 1.47
CLNS1A-210ENST00000528364 ERVK-7P63135 1459 aa24.25■■□□□ 1.47
CLNS1A-210ENST00000528364 CEP152O94986 1710 aa24.24■■□□□ 1.47
CLNS1A-210ENST00000528364 POLR1AO95602 1720 aaPredicted RBP24.24■■□□□ 1.47
CLNS1A-210ENST00000528364 SPATA31D1Q6ZQQ2 1576 aa24.24■■□□□ 1.47
CLNS1A-210ENST00000528364 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
CLNS1A-210ENST00000528364 ZC3H13Q5T200 1668 aaKnown RBP24.21■■□□□ 1.47
CLNS1A-210ENST00000528364 NPHP4O75161 1426 aaPredicted RBP24.21■■□□□ 1.47
CLNS1A-210ENST00000528364 ILDR2Q71H61 639 aa24.21■■□□□ 1.47
CLNS1A-210ENST00000528364 CROCC2H7BZ55 1655 aa24.2■■□□□ 1.46
CLNS1A-210ENST00000528364 ERBINQ96RT1 1412 aa24.18■■□□□ 1.46
CLNS1A-210ENST00000528364 MED14O60244 1454 aa24.18■■□□□ 1.46
CLNS1A-210ENST00000528364 FAM50AQ14320 339 aaKnown RBP24.17■■□□□ 1.46
CLNS1A-210ENST00000528364 VWDEQ8N2E2 1590 aa24.16■■□□□ 1.46
CLNS1A-210ENST00000528364 ANKRD30AQ9BXX3 1397 aa24.16■■□□□ 1.46
CLNS1A-210ENST00000528364 PIP4K2BP78356 416 aa24.15■■□□□ 1.46
CLNS1A-210ENST00000528364 DEPDC5O75140 1603 aa24.14■■□□□ 1.46
CLNS1A-210ENST00000528364 LTKP29376 864 aa24.14■■□□□ 1.45
CLNS1A-210ENST00000528364 ARHGAP31Q2M1Z3 1444 aa24.14■■□□□ 1.45
CLNS1A-210ENST00000528364 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.45
CLNS1A-210ENST00000528364 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
CLNS1A-210ENST00000528364 CPS1P31327 1500 aa24.13■■□□□ 1.45
CLNS1A-210ENST00000528364 TXNDC2Q86VQ3 553 aa24.12■■□□□ 1.45
CLNS1A-210ENST00000528364 KANK1Q14678 1352 aa24.11■■□□□ 1.45
CLNS1A-210ENST00000528364 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
CLNS1A-210ENST00000528364 TOM1O60784 492 aa24.1■■□□□ 1.45
CLNS1A-210ENST00000528364 IQGAP1P46940 1657 aa24.1■■□□□ 1.45
CLNS1A-210ENST00000528364 HSPA1LP34931 641 aa24.08■■□□□ 1.45
CLNS1A-210ENST00000528364 IDI1Q13907 227 aa24.08■■□□□ 1.45
CLNS1A-210ENST00000528364 STAG3Q9UJ98 1225 aa24.06■■□□□ 1.44
CLNS1A-210ENST00000528364 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
CLNS1A-210ENST00000528364 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
CLNS1A-210ENST00000528364 ARHGAP23Q9P227 1491 aa24.04■■□□□ 1.44
CLNS1A-210ENST00000528364 EID1Q9Y6B2 187 aa24.03■■□□□ 1.44
CLNS1A-210ENST00000528364 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
CLNS1A-210ENST00000528364 PIK3C2BO00750 1634 aa24.02■■□□□ 1.44
CLNS1A-210ENST00000528364 SLIT1O75093 1534 aa24.01■■□□□ 1.43
CLNS1A-210ENST00000528364 LMTK2Q8IWU2 1503 aa24.01■■□□□ 1.43
CLNS1A-210ENST00000528364 LRRC7Q96NW7 1537 aa24.01■■□□□ 1.43
CLNS1A-210ENST00000528364 PPARGC1BQ86YN6 1023 aaKnown RBP24.01■■□□□ 1.43
CLNS1A-210ENST00000528364 TMEM2Q9UHN6 1383 aa24.01■■□□□ 1.43
CLNS1A-210ENST00000528364 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
CLNS1A-210ENST00000528364 ANKRD50Q9ULJ7 1429 aa23.99■■□□□ 1.43
CLNS1A-210ENST00000528364 ALKQ9UM73 1620 aa23.99■■□□□ 1.43
CLNS1A-210ENST00000528364 SYNMO15061 1565 aa23.96■■□□□ 1.43
CLNS1A-210ENST00000528364 NOS1P29475 1434 aa23.96■■□□□ 1.43
CLNS1A-210ENST00000528364 SOCS7O14512 581 aa23.95■■□□□ 1.42
CLNS1A-210ENST00000528364 SLC26A8Q96RN1 970 aa23.93■■□□□ 1.42
CLNS1A-210ENST00000528364 EFCAB6Q5THR3 1501 aa23.93■■□□□ 1.42
CLNS1A-210ENST00000528364 ITGAEP38570 1179 aa23.92■■□□□ 1.42
CLNS1A-210ENST00000528364 SLC52A1Q9NWF4 448 aa23.92■■□□□ 1.42
CLNS1A-210ENST00000528364 RBM33Q96EV2 1170 aaKnown RBP23.88■■□□□ 1.41
CLNS1A-210ENST00000528364 BCANQ96GW7 911 aa23.87■■□□□ 1.41
CLNS1A-210ENST00000528364 KCNA6P17658 529 aa23.86■■□□□ 1.41
CLNS1A-210ENST00000528364 KDM5AP29375 1690 aaKnown RBP23.85■■□□□ 1.41
CLNS1A-210ENST00000528364 TET3O43151 1660 aa23.84■■□□□ 1.41
CLNS1A-210ENST00000528364 XIRP1Q702N8 1843 aaKnown RBP23.84■■□□□ 1.41
CLNS1A-210ENST00000528364 ADGRB3O60242 1522 aa23.84■■□□□ 1.41
CLNS1A-210ENST00000528364 PROSER2Q86WR7 435 aaPredicted RBP23.83■■□□□ 1.41
CLNS1A-210ENST00000528364 RPRD2Q5VT52 1461 aaKnown RBP23.82■■□□□ 1.4
CLNS1A-210ENST00000528364 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
CLNS1A-210ENST00000528364 CHGAP10645 457 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms