RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	RRP7BP	Q9NSQ0	103 aa		18.21	■□□□□ 0.51
PSMC3-205	ENST00000528362	KDM5D	Q9BY66	1539 aa		18.21	■□□□□ 0.51
PSMC3-205	ENST00000528362	FAM135A	Q9P2D6	1515 aa		18.21	■□□□□ 0.51
PSMC3-205	ENST00000528362	DUOX2	Q9NRD8	1548 aa		18.2	■□□□□ 0.5
PSMC3-205	ENST00000528362	FAM50A	Q14320	339 aa	Known RBP	18.2	■□□□□ 0.5
PSMC3-205	ENST00000528362	WASHC2C	Q9Y4E1	1318 aa		18.2	■□□□□ 0.5
PSMC3-205	ENST00000528362	CHIC2	Q9UKJ5	165 aa		18.19	■□□□□ 0.5
PSMC3-205	ENST00000528362	CROCC2	H7BZ55	1655 aa		18.18	■□□□□ 0.5
PSMC3-205	ENST00000528362	PPARGC1B	Q86YN6	1023 aa	Known RBP	18.18	■□□□□ 0.5
PSMC3-205	ENST00000528362	ERBIN	Q96RT1	1412 aa		18.17	■□□□□ 0.5
PSMC3-205	ENST00000528362	RNF17	Q9BXT8	1623 aa	Known RBP	18.17	■□□□□ 0.5
PSMC3-205	ENST00000528362	ANKRD30A	Q9BXX3	1397 aa		18.17	■□□□□ 0.5
PSMC3-205	ENST00000528362	PZP	P20742	1482 aa		18.16	■□□□□ 0.5
PSMC3-205	ENST00000528362	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.16	■□□□□ 0.5
PSMC3-205	ENST00000528362	NCOA1	Q15788	1441 aa		18.15	■□□□□ 0.5
PSMC3-205	ENST00000528362	FBXO31	Q5XUX0	539 aa	Predicted RBP	18.15	■□□□□ 0.5
PSMC3-205	ENST00000528362	MROH1	Q8NDA8	1641 aa		18.15	■□□□□ 0.5
PSMC3-205	ENST00000528362	ADGRL2	O95490	1459 aa		18.14	■□□□□ 0.5
PSMC3-205	ENST00000528362	ABCC3	O15438	1527 aa		18.14	■□□□□ 0.49
PSMC3-205	ENST00000528362	SETD1B	Q9UPS6	1966 aa	Known RBP	18.14	■□□□□ 0.49
PSMC3-205	ENST00000528362	TNR	Q92752	1358 aa		18.13	■□□□□ 0.49
PSMC3-205	ENST00000528362	MYO3A	Q8NEV4	1616 aa		18.1	■□□□□ 0.49
PSMC3-205	ENST00000528362	PRDM15	P57071	1507 aa	Predicted RBP	18.09	■□□□□ 0.49
PSMC3-205	ENST00000528362	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	18.08	■□□□□ 0.49
PSMC3-205	ENST00000528362	A2ML1	A8K2U0	1454 aa		18.07	■□□□□ 0.48
PSMC3-205	ENST00000528362	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	18.07	■□□□□ 0.48	9e-7	■■■■□ 21.5
PSMC3-205	ENST00000528362	DMRT2	Q9Y5R5	561 aa		18.07	■□□□□ 0.48
PSMC3-205	ENST00000528362	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.06	■□□□□ 0.48
PSMC3-205	ENST00000528362	ZNF142	P52746	1687 aa	Predicted RBP	18.06	■□□□□ 0.48
PSMC3-205	ENST00000528362	CAMSAP1	Q5T5Y3	1602 aa		18.06	■□□□□ 0.48
PSMC3-205	ENST00000528362	STRC	Q7RTU9	1775 aa		18.06	■□□□□ 0.48
PSMC3-205	ENST00000528362	ANKRD50	Q9ULJ7	1429 aa		18.06	■□□□□ 0.48
PSMC3-205	ENST00000528362	ZC3H13	Q5T200	1668 aa	Known RBP	18.06	■□□□□ 0.48
PSMC3-205	ENST00000528362	ERVK-7	P63135	1459 aa		18.05	■□□□□ 0.48
PSMC3-205	ENST00000528362	PLA2R1	Q13018	1463 aa		18.05	■□□□□ 0.48
PSMC3-205	ENST00000528362	PTPRT	O14522	1441 aa		18.05	■□□□□ 0.48
PSMC3-205	ENST00000528362	DEPDC5	O75140	1603 aa		18.04	■□□□□ 0.48
PSMC3-205	ENST00000528362	ROCK1	Q13464	1354 aa		18.04	■□□□□ 0.48
PSMC3-205	ENST00000528362	NCKAP5L	Q9HCH0	1330 aa		18.03	■□□□□ 0.48
PSMC3-205	ENST00000528362	NLRP1	Q9C000	1473 aa		18.03	■□□□□ 0.48
PSMC3-205	ENST00000528362	ARHGAP31	Q2M1Z3	1444 aa		18.03	■□□□□ 0.48
PSMC3-205	ENST00000528362	SPATA31D1	Q6ZQQ2	1576 aa		18.03	■□□□□ 0.48
PSMC3-205	ENST00000528362	KANK1	Q14678	1352 aa		18.03	■□□□□ 0.48
PSMC3-205	ENST00000528362	VWDE	Q8N2E2	1590 aa		18.01	■□□□□ 0.47
PSMC3-205	ENST00000528362	RRBP1	Q9P2E9	1410 aa	Known RBP	18.01	■□□□□ 0.47
PSMC3-205	ENST00000528362	LMTK2	Q8IWU2	1503 aa		18	■□□□□ 0.47
PSMC3-205	ENST00000528362	ITGAE	P38570	1179 aa		18	■□□□□ 0.47
PSMC3-205	ENST00000528362	PKD2	Q13563	968 aa		18	■□□□□ 0.47
PSMC3-205	ENST00000528362	CEP152	O94986	1710 aa		17.99	■□□□□ 0.47
PSMC3-205	ENST00000528362	CERK	Q8TCT0	537 aa		17.98	■□□□□ 0.47
PSMC3-205	ENST00000528362	UGGT1	Q9NYU2	1555 aa		17.96	■□□□□ 0.47
PSMC3-205	ENST00000528362	THEMIS	Q8N1K5	641 aa	Predicted RBP	17.95	■□□□□ 0.46
PSMC3-205	ENST00000528362	EFCAB6	Q5THR3	1501 aa		17.93	■□□□□ 0.46
PSMC3-205	ENST00000528362	NOS1	P29475	1434 aa		17.91	■□□□□ 0.46
PSMC3-205	ENST00000528362	ANKLE2	Q86XL3	938 aa		17.91	■□□□□ 0.46
PSMC3-205	ENST00000528362	NEURL4	Q96JN8	1562 aa		17.9	■□□□□ 0.46
PSMC3-205	ENST00000528362	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	17.9	■□□□□ 0.46
PSMC3-205	ENST00000528362	UNC13B	O14795	1591 aa		17.89	■□□□□ 0.45
PSMC3-205	ENST00000528362	LTBP4	Q8N2S1	1624 aa		17.89	■□□□□ 0.45
PSMC3-205	ENST00000528362	RPRD2	Q5VT52	1461 aa	Known RBP	17.88	■□□□□ 0.45
PSMC3-205	ENST00000528362	IDI1	Q13907	227 aa		17.87	■□□□□ 0.45
PSMC3-205	ENST00000528362	SYNM	O15061	1565 aa		17.87	■□□□□ 0.45
PSMC3-205	ENST00000528362	NUP155	O75694	1391 aa		17.86	■□□□□ 0.45
PSMC3-205	ENST00000528362	NPHP4	O75161	1426 aa	Predicted RBP	17.86	■□□□□ 0.45
PSMC3-205	ENST00000528362	MED14	O60244	1454 aa		17.86	■□□□□ 0.45
PSMC3-205	ENST00000528362	ARHGAP23	Q9P227	1491 aa		17.84	■□□□□ 0.45
PSMC3-205	ENST00000528362	NAIP	Q13075	1403 aa		17.84	■□□□□ 0.45
PSMC3-205	ENST00000528362	TET3	O43151	1660 aa		17.83	■□□□□ 0.45
PSMC3-205	ENST00000528362	SLIT1	O75093	1534 aa		17.83	■□□□□ 0.45
PSMC3-205	ENST00000528362	UBR1	Q8IWV7	1749 aa		17.83	■□□□□ 0.44
PSMC3-205	ENST00000528362	TMEM2	Q9UHN6	1383 aa		17.82	■□□□□ 0.44
PSMC3-205	ENST00000528362	LTK	P29376	864 aa		17.82	■□□□□ 0.44
PSMC3-205	ENST00000528362	SLC52A1	Q9NWF4	448 aa		17.82	■□□□□ 0.44
PSMC3-205	ENST00000528362	PIK3C2B	O00750	1634 aa		17.82	■□□□□ 0.44
PSMC3-205	ENST00000528362	SCAF11	Q99590	1463 aa	Known RBP	17.82	■□□□□ 0.44
PSMC3-205	ENST00000528362	IQGAP3	Q86VI3	1631 aa		17.81	■□□□□ 0.44
PSMC3-205	ENST00000528362	STAG3	Q9UJ98	1225 aa		17.81	■□□□□ 0.44
PSMC3-205	ENST00000528362	POLR1A	O95602	1720 aa	Predicted RBP	17.81	■□□□□ 0.44
PSMC3-205	ENST00000528362	HFM1	A2PYH4	1435 aa		17.81	■□□□□ 0.44
PSMC3-205	ENST00000528362	TXNDC2	Q86VQ3	553 aa		17.79	■□□□□ 0.44
PSMC3-205	ENST00000528362	CFAP65	Q6ZU64	1925 aa	Known RBP	17.78	■□□□□ 0.44
PSMC3-205	ENST00000528362	ADGRB3	O60242	1522 aa		17.78	■□□□□ 0.44
PSMC3-205	ENST00000528362	IQSEC2	Q5JU85	1478 aa		17.78	■□□□□ 0.44
PSMC3-205	ENST00000528362	EID1	Q9Y6B2	187 aa		17.77	■□□□□ 0.44
PSMC3-205	ENST00000528362	GCC2	Q8IWJ2	1684 aa		17.76	■□□□□ 0.43
PSMC3-205	ENST00000528362		E9PCH4	1651 aa		17.75	■□□□□ 0.43
PSMC3-205	ENST00000528362	IQGAP1	P46940	1657 aa		17.75	■□□□□ 0.43
PSMC3-205	ENST00000528362	KDM5A	P29375	1690 aa	Known RBP	17.74	■□□□□ 0.43
PSMC3-205	ENST00000528362	CPS1	P31327	1500 aa		17.72	■□□□□ 0.43
PSMC3-205	ENST00000528362	ZFYVE9	O95405	1425 aa		17.71	■□□□□ 0.43
PSMC3-205	ENST00000528362	CHGA	P10645	457 aa	Known RBP	17.69	■□□□□ 0.42
PSMC3-205	ENST00000528362	TRIM52	Q96A61	297 aa		17.69	■□□□□ 0.42
PSMC3-205	ENST00000528362	RIMS2	Q9UQ26	1411 aa		17.69	■□□□□ 0.42
PSMC3-205	ENST00000528362	TMEM131L	A2VDJ0	1609 aa		17.69	■□□□□ 0.42
PSMC3-205	ENST00000528362	UBAP1L	F5GYI3	381 aa		17.66	■□□□□ 0.42
PSMC3-205	ENST00000528362	PLEKHG1	Q9ULL1	1385 aa		17.66	■□□□□ 0.42
PSMC3-205	ENST00000528362	SLC26A8	Q96RN1	970 aa		17.65	■□□□□ 0.42
PSMC3-205	ENST00000528362	DISP3	Q9P2K9	1392 aa		17.65	■□□□□ 0.42
PSMC3-205	ENST00000528362	LRRC7	Q96NW7	1537 aa		17.64	■□□□□ 0.41
PSMC3-205	ENST00000528362	SLC4A1AP	Q9BWU0	796 aa	Known RBP	17.64	■□□□□ 0.41

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms