RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 ZNF142P52746 1687 aaPredicted RBP23.65■■□□□ 1.38
PUF60-212ENST00000528320 MYO3AQ8NEV4 1616 aa23.65■■□□□ 1.38
PUF60-212ENST00000528320 CEP170BQ9Y4F5 1589 aaPredicted RBP23.65■■□□□ 1.38
PUF60-212ENST00000528320 ZNF335Q9H4Z2 1342 aaPredicted RBP23.64■■□□□ 1.38
PUF60-212ENST00000528320 TCOF1Q13428 1488 aaKnown RBP23.64■■□□□ 1.38
PUF60-212ENST00000528320 KIF3BO15066 747 aa23.61■■□□□ 1.37
PUF60-212ENST00000528320 APLP2Q06481 763 aa23.61■■□□□ 1.37
PUF60-212ENST00000528320 ILDR2Q71H61 639 aa23.61■■□□□ 1.37
PUF60-212ENST00000528320 A2ML1A8K2U0 1454 aa23.59■■□□□ 1.37
PUF60-212ENST00000528320 FBXO31Q5XUX0 539 aaPredicted RBP23.57■■□□□ 1.36
PUF60-212ENST00000528320 UBAP1LF5GYI3 381 aa23.56■■□□□ 1.36
PUF60-212ENST00000528320 MAST1Q9Y2H9 1570 aa23.56■■□□□ 1.36
PUF60-212ENST00000528320 TSPY4P0CV99 314 aa23.55■■□□□ 1.36
PUF60-212ENST00000528320 TSPY10P0CW01 314 aa23.55■■□□□ 1.36
PUF60-212ENST00000528320 WASHC2CQ9Y4E1 1318 aa23.55■■□□□ 1.36
PUF60-212ENST00000528320 TNRQ92752 1358 aa23.54■■□□□ 1.36
PUF60-212ENST00000528320 SOCS7O14512 581 aa23.54■■□□□ 1.36
PUF60-212ENST00000528320 DNMT1P26358 1616 aaKnown RBP23.54■■□□□ 1.36
PUF60-212ENST00000528320 FAM135AQ9P2D6 1515 aa23.54■■□□□ 1.36
PUF60-212ENST00000528320 FGD6Q6ZV73 1430 aa23.53■■□□□ 1.36
PUF60-212ENST00000528320 PZPP20742 1482 aa23.52■■□□□ 1.36
PUF60-212ENST00000528320 KDM5DQ9BY66 1539 aa23.51■■□□□ 1.35
PUF60-212ENST00000528320 ABCC5O15440 1437 aa23.5■■□□□ 1.35
PUF60-212ENST00000528320 SPATA31D1Q6ZQQ2 1576 aa23.49■■□□□ 1.35
PUF60-212ENST00000528320 PTPN23Q9H3S7 1636 aa23.48■■□□□ 1.35
PUF60-212ENST00000528320 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
PUF60-212ENST00000528320 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
PUF60-212ENST00000528320 SHANK2Q9UPX8 1470 aa23.46■■□□□ 1.35
PUF60-212ENST00000528320 NLRP1Q9C000 1473 aa23.43■■□□□ 1.34
PUF60-212ENST00000528320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.42■■□□□ 1.349e-7■■□□□ 13.7
PUF60-212ENST00000528320 DAPK1P53355 1430 aa23.42■■□□□ 1.34
PUF60-212ENST00000528320 NEURL4Q96JN8 1562 aa23.41■■□□□ 1.34
PUF60-212ENST00000528320 CPS1P31327 1500 aa23.4■■□□□ 1.34
PUF60-212ENST00000528320 POLR1AO95602 1720 aaPredicted RBP23.4■■□□□ 1.34
PUF60-212ENST00000528320 TOM1O60784 492 aa23.39■■□□□ 1.33
PUF60-212ENST00000528320 UGGT1Q9NYU2 1555 aa23.38■■□□□ 1.33
PUF60-212ENST00000528320 CROCC2H7BZ55 1655 aa23.37■■□□□ 1.33
PUF60-212ENST00000528320 DUOX2Q9NRD8 1548 aa23.37■■□□□ 1.33
PUF60-212ENST00000528320 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
PUF60-212ENST00000528320 MED14O60244 1454 aa23.36■■□□□ 1.33
PUF60-212ENST00000528320 EIF2AK4Q9P2K8 1649 aaKnown RBP23.35■■□□□ 1.33
PUF60-212ENST00000528320 NPHP4O75161 1426 aaPredicted RBP23.34■■□□□ 1.33
PUF60-212ENST00000528320 KIF15Q9NS87 1388 aa23.34■■□□□ 1.33
PUF60-212ENST00000528320 ABCC3O15438 1527 aa23.33■■□□□ 1.33
PUF60-212ENST00000528320 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
PUF60-212ENST00000528320 PIP4K2BP78356 416 aa23.33■■□□□ 1.33
PUF60-212ENST00000528320 DEPDC5O75140 1603 aa23.33■■□□□ 1.32
PUF60-212ENST00000528320 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.32
PUF60-212ENST00000528320 HSPA1LP34931 641 aa23.32■■□□□ 1.32
PUF60-212ENST00000528320 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
PUF60-212ENST00000528320 ADGRL2O95490 1459 aa23.31■■□□□ 1.32
PUF60-212ENST00000528320 ERBINQ96RT1 1412 aa23.31■■□□□ 1.32
PUF60-212ENST00000528320 RRP7BPQ9NSQ0 103 aa23.3■■□□□ 1.32
PUF60-212ENST00000528320 ZC3H13Q5T200 1668 aaKnown RBP23.29■■□□□ 1.32
PUF60-212ENST00000528320 ERVK-7P63135 1459 aa23.28■■□□□ 1.32
PUF60-212ENST00000528320 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
PUF60-212ENST00000528320 CHIC2Q9UKJ5 165 aa23.25■■□□□ 1.31
PUF60-212ENST00000528320 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
PUF60-212ENST00000528320 IQGAP1P46940 1657 aa23.24■■□□□ 1.31
PUF60-212ENST00000528320 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
PUF60-212ENST00000528320 ARHGAP31Q2M1Z3 1444 aa23.21■■□□□ 1.31
PUF60-212ENST00000528320 CFAP65Q6ZU64 1925 aaKnown RBP23.2■■□□□ 1.3
PUF60-212ENST00000528320 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
PUF60-212ENST00000528320 TXNDC2Q86VQ3 553 aa23.18■■□□□ 1.3
PUF60-212ENST00000528320 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
PUF60-212ENST00000528320 ROCK1Q13464 1354 aa23.17■■□□□ 1.3
PUF60-212ENST00000528320 CEP152O94986 1710 aa23.17■■□□□ 1.3
PUF60-212ENST00000528320 LTKP29376 864 aa23.17■■□□□ 1.3
PUF60-212ENST00000528320 ALKQ9UM73 1620 aa23.17■■□□□ 1.3
PUF60-212ENST00000528320 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
PUF60-212ENST00000528320 UBR1Q8IWV7 1749 aa23.16■■□□□ 1.3
PUF60-212ENST00000528320 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
PUF60-212ENST00000528320 ARHGAP23Q9P227 1491 aa23.15■■□□□ 1.3
PUF60-212ENST00000528320 ANKRD50Q9ULJ7 1429 aa23.15■■□□□ 1.3
PUF60-212ENST00000528320 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.3
PUF60-212ENST00000528320 STRCP1A6NGW2 1772 aa23.14■■□□□ 1.3
PUF60-212ENST00000528320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.297e-7■□□□□ 9.1
PUF60-212ENST00000528320 EID1Q9Y6B2 187 aa23.14■■□□□ 1.29
PUF60-212ENST00000528320 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
PUF60-212ENST00000528320 SLIT1O75093 1534 aa23.13■■□□□ 1.29
PUF60-212ENST00000528320 KANK1Q14678 1352 aa23.12■■□□□ 1.29
PUF60-212ENST00000528320 SYNMO15061 1565 aa23.1■■□□□ 1.29
PUF60-212ENST00000528320 STAG3Q9UJ98 1225 aa23.08■■□□□ 1.29
PUF60-212ENST00000528320 TMEM2Q9UHN6 1383 aa23.08■■□□□ 1.29
PUF60-212ENST00000528320 IDI1Q13907 227 aa23.06■■□□□ 1.28
PUF60-212ENST00000528320 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
PUF60-212ENST00000528320 NOS1P29475 1434 aa23.03■■□□□ 1.28
PUF60-212ENST00000528320 PIK3C2BO00750 1634 aa23.03■■□□□ 1.28
PUF60-212ENST00000528320 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
PUF60-212ENST00000528320 TRIM26Q12899 539 aaPredicted RBP23.01■■□□□ 1.27
PUF60-212ENST00000528320 EFCAB6Q5THR3 1501 aa23.01■■□□□ 1.27
PUF60-212ENST00000528320 UNC13BO14795 1591 aa23■■□□□ 1.27
PUF60-212ENST00000528320 KDM5AP29375 1690 aaKnown RBP23■■□□□ 1.27
PUF60-212ENST00000528320 KCNA6P17658 529 aa22.99■■□□□ 1.27
PUF60-212ENST00000528320 SLC52A1Q9NWF4 448 aa22.99■■□□□ 1.27
PUF60-212ENST00000528320 RPRD2Q5VT52 1461 aaKnown RBP22.98■■□□□ 1.27
PUF60-212ENST00000528320 ITGAEP38570 1179 aa22.96■■□□□ 1.27
PUF60-212ENST00000528320 FAM135BQ49AJ0 1406 aa22.96■■□□□ 1.27
PUF60-212ENST00000528320 XIRP1Q702N8 1843 aaKnown RBP22.96■■□□□ 1.27
PUF60-212ENST00000528320 SLC26A8Q96RN1 970 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms