RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CAMSAP1Q5T5Y3 1602 aa14.89□□□□□ -0.03
CHD7-208ENST00000528280 PLXNC1O60486 1568 aa14.89□□□□□ -0.03
CHD7-208ENST00000528280 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
CHD7-208ENST00000528280 NPATQ14207 1427 aa14.88□□□□□ -0.03
CHD7-208ENST00000528280 HSPA1LP34931 641 aa14.87□□□□□ -0.03
CHD7-208ENST00000528280 WASHC2CQ9Y4E1 1318 aa14.86□□□□□ -0.03
CHD7-208ENST00000528280 MROH2AA6NES4 1674 aa14.85□□□□□ -0.03
CHD7-208ENST00000528280 NCKAP5LQ9HCH0 1330 aa14.84□□□□□ -0.03
CHD7-208ENST00000528280 MAST1Q9Y2H9 1570 aa14.82□□□□□ -0.04
CHD7-208ENST00000528280 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
CHD7-208ENST00000528280 FGD6Q6ZV73 1430 aa14.81□□□□□ -0.04
CHD7-208ENST00000528280 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
CHD7-208ENST00000528280 CLTCQ00610 1675 aaKnown RBP14.79□□□□□ -0.04
CHD7-208ENST00000528280 PTPRKQ15262 1439 aa14.79□□□□□ -0.04
CHD7-208ENST00000528280 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
CHD7-208ENST00000528280 RRP7BPQ9NSQ0 103 aa14.79□□□□□ -0.04
CHD7-208ENST00000528280 ZNF142P52746 1687 aaPredicted RBP14.78□□□□□ -0.04
CHD7-208ENST00000528280 TCOF1Q13428 1488 aaKnown RBP14.78□□□□□ -0.04
CHD7-208ENST00000528280 ABCC5O15440 1437 aa14.78□□□□□ -0.04
CHD7-208ENST00000528280 PKD2Q13563 968 aa14.78□□□□□ -0.04
CHD7-208ENST00000528280 PLA2R1Q13018 1463 aa14.77□□□□□ -0.04
CHD7-208ENST00000528280 SHANK2Q9UPX8 1470 aa14.77□□□□□ -0.04
CHD7-208ENST00000528280 ANKRD30AQ9BXX3 1397 aa14.77□□□□□ -0.04
CHD7-208ENST00000528280 TOM1O60784 492 aa14.77□□□□□ -0.05
CHD7-208ENST00000528280 PIP4K2BP78356 416 aa14.77□□□□□ -0.05
CHD7-208ENST00000528280 FAM50AQ14320 339 aaKnown RBP14.77□□□□□ -0.05
CHD7-208ENST00000528280 DUOX2Q9NRD8 1548 aa14.76□□□□□ -0.05
CHD7-208ENST00000528280 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
CHD7-208ENST00000528280 KDM5DQ9BY66 1539 aa14.76□□□□□ -0.05
CHD7-208ENST00000528280 DAPK1P53355 1430 aa14.75□□□□□ -0.05
CHD7-208ENST00000528280 KIF15Q9NS87 1388 aa14.75□□□□□ -0.05
CHD7-208ENST00000528280 FBXO31Q5XUX0 539 aaPredicted RBP14.74□□□□□ -0.05
CHD7-208ENST00000528280 CHIC2Q9UKJ5 165 aa14.74□□□□□ -0.05
CHD7-208ENST00000528280 THEMISQ8N1K5 641 aaPredicted RBP14.73□□□□□ -0.05
CHD7-208ENST00000528280 PZPP20742 1482 aa14.73□□□□□ -0.05
CHD7-208ENST00000528280 ERBINQ96RT1 1412 aa14.73□□□□□ -0.05
CHD7-208ENST00000528280 MYO3AQ8NEV4 1616 aa14.73□□□□□ -0.05
CHD7-208ENST00000528280 EIF2AK4Q9P2K8 1649 aaKnown RBP14.73□□□□□ -0.05
CHD7-208ENST00000528280 KANK1Q14678 1352 aa14.73□□□□□ -0.05
CHD7-208ENST00000528280 TNRQ92752 1358 aa14.73□□□□□ -0.05
CHD7-208ENST00000528280 DNMT1P26358 1616 aaKnown RBP14.71□□□□□ -0.05
CHD7-208ENST00000528280 CPS1P31327 1500 aa14.71□□□□□ -0.06
CHD7-208ENST00000528280 CEP170BQ9Y4F5 1589 aaPredicted RBP14.7□□□□□ -0.06
CHD7-208ENST00000528280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.064e-7■■■□□ 15
CHD7-208ENST00000528280 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
CHD7-208ENST00000528280 A2ML1A8K2U0 1454 aa14.69□□□□□ -0.06
CHD7-208ENST00000528280 ALKQ9UM73 1620 aa14.69□□□□□ -0.06
CHD7-208ENST00000528280 ANKLE2Q86XL3 938 aa14.68□□□□□ -0.06
CHD7-208ENST00000528280 POLR1AO95602 1720 aaPredicted RBP14.68□□□□□ -0.06
CHD7-208ENST00000528280 NLRP1Q9C000 1473 aa14.68□□□□□ -0.06
CHD7-208ENST00000528280 CROCC2H7BZ55 1655 aa14.68□□□□□ -0.06
CHD7-208ENST00000528280 RGS17Q9UGC6 210 aaPredicted RBP14.67□□□□□ -0.06
CHD7-208ENST00000528280 ZC3H13Q5T200 1668 aaKnown RBP14.67□□□□□ -0.06
CHD7-208ENST00000528280 ABCC3O15438 1527 aa14.66□□□□□ -0.06
CHD7-208ENST00000528280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHD7-208ENST00000528280 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
CHD7-208ENST00000528280 ADGRL2O95490 1459 aa14.65□□□□□ -0.06
CHD7-208ENST00000528280 ROCK1Q13464 1354 aa14.62□□□□□ -0.07
CHD7-208ENST00000528280 PPARGC1BQ86YN6 1023 aaKnown RBP14.62□□□□□ -0.07
CHD7-208ENST00000528280 ANKRD50Q9ULJ7 1429 aa14.62□□□□□ -0.07
CHD7-208ENST00000528280 NEURL4Q96JN8 1562 aa14.61□□□□□ -0.07
CHD7-208ENST00000528280 PRDM15P57071 1507 aaPredicted RBP14.61□□□□□ -0.07
CHD7-208ENST00000528280 MROH1Q8NDA8 1641 aa14.6□□□□□ -0.07
CHD7-208ENST00000528280 ERVK-7P63135 1459 aa14.6□□□□□ -0.07
CHD7-208ENST00000528280 VWDEQ8N2E2 1590 aa14.6□□□□□ -0.07
CHD7-208ENST00000528280 UGGT1Q9NYU2 1555 aa14.6□□□□□ -0.07
CHD7-208ENST00000528280 SLC52A1Q9NWF4 448 aa14.59□□□□□ -0.07
CHD7-208ENST00000528280 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
CHD7-208ENST00000528280 LMTK2Q8IWU2 1503 aa14.58□□□□□ -0.08
CHD7-208ENST00000528280 ITGAEP38570 1179 aa14.58□□□□□ -0.08
CHD7-208ENST00000528280 EID1Q9Y6B2 187 aa14.58□□□□□ -0.08
CHD7-208ENST00000528280 DEPDC5O75140 1603 aa14.58□□□□□ -0.08
CHD7-208ENST00000528280 CEP152O94986 1710 aa14.56□□□□□ -0.08
CHD7-208ENST00000528280 STRCP1A6NGW2 1772 aa14.56□□□□□ -0.08
CHD7-208ENST00000528280 CFAP65Q6ZU64 1925 aaKnown RBP14.55□□□□□ -0.08
CHD7-208ENST00000528280 HDGFP51858 240 aaKnown RBP14.55□□□□□ -0.08
CHD7-208ENST00000528280 IDI1Q13907 227 aa14.54□□□□□ -0.08
CHD7-208ENST00000528280 POTEAQ6S8J7 498 aa14.54□□□□□ -0.08
CHD7-208ENST00000528280 TXNDC2Q86VQ3 553 aa14.54□□□□□ -0.08
CHD7-208ENST00000528280 SENP3Q9H4L4 574 aaPredicted RBP14.54□□□□□ -0.08
CHD7-208ENST00000528280 MED14O60244 1454 aa14.53□□□□□ -0.08
CHD7-208ENST00000528280 RPRD2Q5VT52 1461 aaKnown RBP14.53□□□□□ -0.08
CHD7-208ENST00000528280 NPHP4O75161 1426 aaPredicted RBP14.52□□□□□ -0.08
CHD7-208ENST00000528280 RRBP1Q9P2E9 1410 aaKnown RBP14.51□□□□□ -0.09
CHD7-208ENST00000528280 SETD1AO15047 1707 aaKnown RBP14.51□□□□□ -0.09
CHD7-208ENST00000528280 NUP155O75694 1391 aa14.5□□□□□ -0.09
CHD7-208ENST00000528280 LRRC7Q96NW7 1537 aa14.5□□□□□ -0.09
CHD7-208ENST00000528280 NOS1P29475 1434 aa14.49□□□□□ -0.09
CHD7-208ENST00000528280 TMEM2Q9UHN6 1383 aa14.48□□□□□ -0.09
CHD7-208ENST00000528280 EFCAB6Q5THR3 1501 aa14.48□□□□□ -0.09
CHD7-208ENST00000528280 IQGAP1P46940 1657 aa14.48□□□□□ -0.09
CHD7-208ENST00000528280 SYNMO15061 1565 aa14.47□□□□□ -0.09
CHD7-208ENST00000528280 SLIT1O75093 1534 aa14.47□□□□□ -0.09
CHD7-208ENST00000528280 UBR1Q8IWV7 1749 aa14.47□□□□□ -0.09
CHD7-208ENST00000528280 SCAF11Q99590 1463 aaKnown RBP14.47□□□□□ -0.09
CHD7-208ENST00000528280 LTKP29376 864 aa14.47□□□□□ -0.09
CHD7-208ENST00000528280 XIRP1Q702N8 1843 aaKnown RBP14.47□□□□□ -0.09
CHD7-208ENST00000528280 ARHGAP23Q9P227 1491 aa14.46□□□□□ -0.09
CHD7-208ENST00000528280 KDM5AP29375 1690 aaKnown RBP14.46□□□□□ -0.1
CHD7-208ENST00000528280 UNC13BO14795 1591 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms