RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 KDM5CP41229 1560 aa11.23□□□□□ -0.61
PTP4A2-210ENST00000528253 HECW2Q9P2P5 1572 aa11.23□□□□□ -0.61
PTP4A2-210ENST00000528253 NCOA2Q15596 1464 aa11.22□□□□□ -0.61
PTP4A2-210ENST00000528253 TRAPPC8Q9Y2L5 1435 aa11.22□□□□□ -0.61
PTP4A2-210ENST00000528253 ADAMTSL3P82987 1691 aa11.21□□□□□ -0.61
PTP4A2-210ENST00000528253 ARHGEF12Q9NZN5 1544 aa11.21□□□□□ -0.61
PTP4A2-210ENST00000528253 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
PTP4A2-210ENST00000528253 PRKAR2AP13861 404 aaKnown RBP11.21□□□□□ -0.61
PTP4A2-210ENST00000528253 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.61
PTP4A2-210ENST00000528253 SYCP2Q9BX26 1530 aa11.2□□□□□ -0.62
PTP4A2-210ENST00000528253 MLH3Q9UHC1 1453 aa11.2□□□□□ -0.62
PTP4A2-210ENST00000528253 C9orf84Q5VXU9 1444 aa11.2□□□□□ -0.62
PTP4A2-210ENST00000528253 SPAG9O60271 1321 aaKnown RBP11.2□□□□□ -0.62
PTP4A2-210ENST00000528253 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
PTP4A2-210ENST00000528253 ZNF644Q9H582 1327 aaPredicted RBP11.18□□□□□ -0.62
PTP4A2-210ENST00000528253 MLECQ14165 292 aa11.18□□□□□ -0.62
PTP4A2-210ENST00000528253 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
PTP4A2-210ENST00000528253 SIGLEC1Q9BZZ2 1709 aa11.18□□□□□ -0.62
PTP4A2-210ENST00000528253 ABCA6Q8N139 1617 aa11.17□□□□□ -0.62
PTP4A2-210ENST00000528253 MADDQ8WXG6 1647 aa11.17□□□□□ -0.62
PTP4A2-210ENST00000528253 DIP2CQ9Y2E4 1556 aa11.17□□□□□ -0.62
PTP4A2-210ENST00000528253 FER1L4A9Z1Z3 1794 aa11.17□□□□□ -0.62
PTP4A2-210ENST00000528253 RIMS1Q86UR5 1692 aaKnown RBP11.17□□□□□ -0.62
PTP4A2-210ENST00000528253 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
PTP4A2-210ENST00000528253 REREQ9P2R6 1566 aa11.16□□□□□ -0.62
PTP4A2-210ENST00000528253 PTPRMP28827 1452 aa11.15□□□□□ -0.62
PTP4A2-210ENST00000528253 CAMSAP2Q08AD1 1489 aa11.15□□□□□ -0.62
PTP4A2-210ENST00000528253 ATP7AQ04656 1500 aa11.14□□□□□ -0.63
PTP4A2-210ENST00000528253 TSPY4P0CV99 314 aa11.14□□□□□ -0.63
PTP4A2-210ENST00000528253 TSPY10P0CW01 314 aa11.14□□□□□ -0.63
PTP4A2-210ENST00000528253 ESF1Q9H501 851 aaKnown RBP11.14□□□□□ -0.63
PTP4A2-210ENST00000528253 ADGBQ8N7X0 1667 aa11.14□□□□□ -0.63
PTP4A2-210ENST00000528253 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
PTP4A2-210ENST00000528253 MYOM3Q5VTT5 1437 aa11.13□□□□□ -0.63
PTP4A2-210ENST00000528253 POTEIP0CG38 1075 aa11.13□□□□□ -0.63
PTP4A2-210ENST00000528253 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
PTP4A2-210ENST00000528253 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
PTP4A2-210ENST00000528253 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
PTP4A2-210ENST00000528253 MIA2Q96PC5 1412 aa11.12□□□□□ -0.63
PTP4A2-210ENST00000528253 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
PTP4A2-210ENST00000528253 RTEL1-TNFRSF6BF6WH68 1400 aa11.11□□□□□ -0.63
PTP4A2-210ENST00000528253 AGLP35573 1532 aa11.11□□□□□ -0.63
PTP4A2-210ENST00000528253 IFNLR1Q8IU57 520 aaPredicted RBP11.11□□□□□ -0.63
PTP4A2-210ENST00000528253 ARHGEF5Q12774 1597 aa11.11□□□□□ -0.63
PTP4A2-210ENST00000528253 A2MP01023 1474 aa11.1□□□□□ -0.63
PTP4A2-210ENST00000528253 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
PTP4A2-210ENST00000528253 POTEMA6NI47 508 aa11.07□□□□□ -0.64
PTP4A2-210ENST00000528253 GGT6Q6P531 493 aa11.07□□□□□ -0.64
PTP4A2-210ENST00000528253 DHX29Q7Z478 1369 aaKnown RBP11.06□□□□□ -0.64
PTP4A2-210ENST00000528253 PLXNC1O60486 1568 aa11.06□□□□□ -0.64
PTP4A2-210ENST00000528253 CEBPAP49715 358 aaPredicted RBP11.05□□□□□ -0.64
PTP4A2-210ENST00000528253 FGD6Q6ZV73 1430 aa11.05□□□□□ -0.64
PTP4A2-210ENST00000528253 CNTLNQ9NXG0 1405 aa11.05□□□□□ -0.64
PTP4A2-210ENST00000528253 C3P01024 1663 aa11.04□□□□□ -0.64
PTP4A2-210ENST00000528253 MAST1Q9Y2H9 1570 aa11.04□□□□□ -0.64
PTP4A2-210ENST00000528253 KIF3BO15066 747 aa11.04□□□□□ -0.64
PTP4A2-210ENST00000528253 MROH2AA6NES4 1674 aa11.04□□□□□ -0.64
PTP4A2-210ENST00000528253 CROCC2H7BZ55 1655 aa11.04□□□□□ -0.64
PTP4A2-210ENST00000528253 CLTCQ00610 1675 aaKnown RBP11.04□□□□□ -0.64
PTP4A2-210ENST00000528253 FAM50AQ14320 339 aaKnown RBP11.03□□□□□ -0.64
PTP4A2-210ENST00000528253 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
PTP4A2-210ENST00000528253 PREX1Q8TCU6 1659 aa11.02□□□□□ -0.64
PTP4A2-210ENST00000528253 TCOF1Q13428 1488 aaKnown RBP11.02□□□□□ -0.65
PTP4A2-210ENST00000528253 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.65
PTP4A2-210ENST00000528253 DNMT1P26358 1616 aaKnown RBP11.02□□□□□ -0.65
PTP4A2-210ENST00000528253 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
PTP4A2-210ENST00000528253 ABCC5O15440 1437 aa11.01□□□□□ -0.65
PTP4A2-210ENST00000528253 POTEGQ6S5H5 508 aa11□□□□□ -0.65
PTP4A2-210ENST00000528253 RRP7BPQ9NSQ0 103 aa11□□□□□ -0.65
PTP4A2-210ENST00000528253 CHIC2Q9UKJ5 165 aa11□□□□□ -0.65
PTP4A2-210ENST00000528253 ZMYM3Q14202 1370 aa11□□□□□ -0.65
PTP4A2-210ENST00000528253 DAPK1P53355 1430 aa11□□□□□ -0.65
PTP4A2-210ENST00000528253 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
PTP4A2-210ENST00000528253 CFAP65Q6ZU64 1925 aaKnown RBP10.99□□□□□ -0.65
PTP4A2-210ENST00000528253 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
PTP4A2-210ENST00000528253 WASHC2CQ9Y4E1 1318 aa10.99□□□□□ -0.65
PTP4A2-210ENST00000528253 LMTK3Q96Q04 1460 aa10.99□□□□□ -0.65
PTP4A2-210ENST00000528253 DUOX2Q9NRD8 1548 aa10.99□□□□□ -0.65
PTP4A2-210ENST00000528253 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
PTP4A2-210ENST00000528253 ANKRD30AQ9BXX3 1397 aa10.98□□□□□ -0.65
PTP4A2-210ENST00000528253 EIF2AK4Q9P2K8 1649 aaKnown RBP10.98□□□□□ -0.65
PTP4A2-210ENST00000528253 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
PTP4A2-210ENST00000528253 KIF15Q9NS87 1388 aa10.97□□□□□ -0.65
PTP4A2-210ENST00000528253 UHRF1BP1Q6BDS2 1440 aa10.97□□□□□ -0.65
PTP4A2-210ENST00000528253 HSPA2P54652 639 aa10.96□□□□□ -0.65
PTP4A2-210ENST00000528253 RNF17Q9BXT8 1623 aaKnown RBP10.95□□□□□ -0.66
PTP4A2-210ENST00000528253 FAM135AQ9P2D6 1515 aa10.95□□□□□ -0.66
PTP4A2-210ENST00000528253 NPATQ14207 1427 aa10.95□□□□□ -0.66
PTP4A2-210ENST00000528253 MIER1Q8N108 512 aa10.95□□□□□ -0.66
PTP4A2-210ENST00000528253 KDM5DQ9BY66 1539 aa10.94□□□□□ -0.66
PTP4A2-210ENST00000528253 ZC3H13Q5T200 1668 aaKnown RBP10.94□□□□□ -0.66
PTP4A2-210ENST00000528253 NCOA1Q15788 1441 aa10.93□□□□□ -0.66
PTP4A2-210ENST00000528253 ERBINQ96RT1 1412 aa10.93□□□□□ -0.66
PTP4A2-210ENST00000528253 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
PTP4A2-210ENST00000528253 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
PTP4A2-210ENST00000528253 CEP152O94986 1710 aa10.92□□□□□ -0.66
PTP4A2-210ENST00000528253 ITGAEP38570 1179 aa10.92□□□□□ -0.66
PTP4A2-210ENST00000528253 ADGRL2O95490 1459 aa10.92□□□□□ -0.66
PTP4A2-210ENST00000528253 KANK1Q14678 1352 aa10.91□□□□□ -0.66
PTP4A2-210ENST00000528253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms