RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 PLA2R1Q13018 1463 aa40.91■■■■■ 4.14
TRIM3-206ENST00000528227 LTBP4Q8N2S1 1624 aa40.9■■■■■ 4.14
TRIM3-206ENST00000528227 MAST1Q9Y2H9 1570 aa40.88■■■■■ 4.13
TRIM3-206ENST00000528227 NCKAP5LQ9HCH0 1330 aa40.88■■■■■ 4.13
TRIM3-206ENST00000528227 MYOM3Q5VTT5 1437 aa40.87■■■■■ 4.13
TRIM3-206ENST00000528227 MIA2Q96PC5 1412 aa40.86■■■■■ 4.13
TRIM3-206ENST00000528227 A2ML1A8K2U0 1454 aa40.83■■■■■ 4.13
TRIM3-206ENST00000528227 PZPP20742 1482 aa40.83■■■■■ 4.13
TRIM3-206ENST00000528227 TCOF1Q13428 1488 aaKnown RBP40.83■■■■■ 4.13
TRIM3-206ENST00000528227 WASHC2CQ9Y4E1 1318 aa40.82■■■■■ 4.13
TRIM3-206ENST00000528227 PKD2Q13563 968 aa40.81■■■■■ 4.12
TRIM3-206ENST00000528227 DNMT1P26358 1616 aaKnown RBP40.8■■■■■ 4.12
TRIM3-206ENST00000528227 FBXO31Q5XUX0 539 aaPredicted RBP40.79■■■■■ 4.12
TRIM3-206ENST00000528227 TNRQ92752 1358 aa40.77■■■■■ 4.12
TRIM3-206ENST00000528227 RNF17Q9BXT8 1623 aaKnown RBP40.76■■■■■ 4.12
TRIM3-206ENST00000528227 IQSEC2Q5JU85 1478 aa40.74■■■■■ 4.11
TRIM3-206ENST00000528227 EIF2AK4Q9P2K8 1649 aaKnown RBP40.71■■■■■ 4.11
TRIM3-206ENST00000528227 ZNF335Q9H4Z2 1342 aaPredicted RBP40.67■■■■■ 4.1
TRIM3-206ENST00000528227 ZC3H13Q5T200 1668 aaKnown RBP40.66■■■■■ 4.1
TRIM3-206ENST00000528227 APLP2Q06481 763 aa40.65■■■■■ 4.1
TRIM3-206ENST00000528227 ABCC3O15438 1527 aa40.65■■■■■ 4.1
TRIM3-206ENST00000528227 MROH1Q8NDA8 1641 aa40.62■■■■■ 4.09
TRIM3-206ENST00000528227 DUOX2Q9NRD8 1548 aa40.62■■■■■ 4.09
TRIM3-206ENST00000528227 POLR1AO95602 1720 aaPredicted RBP40.62■■■■■ 4.09
TRIM3-206ENST00000528227 PTPN23Q9H3S7 1636 aa40.61■■■■■ 4.09
TRIM3-206ENST00000528227 NLRP1Q9C000 1473 aa40.61■■■■■ 4.09
TRIM3-206ENST00000528227 CROCC2H7BZ55 1655 aa40.6■■■■■ 4.09
TRIM3-206ENST00000528227 SHANK2Q9UPX8 1470 aa40.58■■■■■ 4.09
TRIM3-206ENST00000528227 NEURL4Q96JN8 1562 aa40.57■■■■■ 4.09
TRIM3-206ENST00000528227 ABCC5O15440 1437 aa40.57■■■■■ 4.08
TRIM3-206ENST00000528227 SPATA31D1Q6ZQQ2 1576 aa40.54■■■■■ 4.08
TRIM3-206ENST00000528227 UGGT1Q9NYU2 1555 aa40.53■■■■■ 4.08
TRIM3-206ENST00000528227 KIF15Q9NS87 1388 aa40.52■■■■■ 4.08
TRIM3-206ENST00000528227 CEP152O94986 1710 aa40.52■■■■■ 4.08
TRIM3-206ENST00000528227 FGD6Q6ZV73 1430 aa40.51■■■■■ 4.08
TRIM3-206ENST00000528227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.51■■■■■ 4.08
TRIM3-206ENST00000528227 THEMISQ8N1K5 641 aaPredicted RBP40.5■■■■■ 4.07
TRIM3-206ENST00000528227 ERVK-7P63135 1459 aa40.49■■■■■ 4.07
TRIM3-206ENST00000528227 DAPK1P53355 1430 aa40.49■■■■■ 4.07
TRIM3-206ENST00000528227 ERBINQ96RT1 1412 aa40.47■■■■■ 4.07
TRIM3-206ENST00000528227 ANKLE2Q86XL3 938 aa40.46■■■■■ 4.07
TRIM3-206ENST00000528227 PRDM15P57071 1507 aaPredicted RBP40.45■■■■■ 4.07
TRIM3-206ENST00000528227 RRP7BPQ9NSQ0 103 aa40.44■■■■■ 4.06
TRIM3-206ENST00000528227 DEPDC5O75140 1603 aa40.42■■■■■ 4.06
TRIM3-206ENST00000528227 MED14O60244 1454 aa40.39■■■■■ 4.06
TRIM3-206ENST00000528227 NPHP4O75161 1426 aaPredicted RBP40.36■■■■■ 4.05
TRIM3-206ENST00000528227 UBAP1LF5GYI3 381 aa40.36■■■■■ 4.05
TRIM3-206ENST00000528227 CPS1P31327 1500 aa40.35■■■■■ 4.05
TRIM3-206ENST00000528227 ARHGAP31Q2M1Z3 1444 aa40.34■■■■■ 4.05
TRIM3-206ENST00000528227 CFAP65Q6ZU64 1925 aaKnown RBP40.34■■■■■ 4.05
TRIM3-206ENST00000528227 VWDEQ8N2E2 1590 aa40.32■■■■■ 4.05
TRIM3-206ENST00000528227 ANKRD30AQ9BXX3 1397 aa40.31■■■■■ 4.04
TRIM3-206ENST00000528227 IQGAP1P46940 1657 aa40.31■■■■■ 4.04
TRIM3-206ENST00000528227 UBR1Q8IWV7 1749 aa40.3■■■■■ 4.04
TRIM3-206ENST00000528227 CHIC2Q9UKJ5 165 aa40.29■■■■■ 4.04
TRIM3-206ENST00000528227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.27■■■■■ 4.04
TRIM3-206ENST00000528227 DISP3Q9P2K9 1392 aa40.26■■■■■ 4.04
TRIM3-206ENST00000528227 KANK1Q14678 1352 aa40.23■■■■■ 4.03
TRIM3-206ENST00000528227 ADGRL2O95490 1459 aa40.2■■■■■ 4.03
TRIM3-206ENST00000528227 LMTK2Q8IWU2 1503 aa40.2■■■■■ 4.03
TRIM3-206ENST00000528227 SLIT1O75093 1534 aa40.16■■■■■ 4.02
TRIM3-206ENST00000528227 ARHGAP23Q9P227 1491 aa40.15■■■■■ 4.02
TRIM3-206ENST00000528227 SCAF11Q99590 1463 aaKnown RBP40.14■■■■■ 4.02
TRIM3-206ENST00000528227 FAM50AQ14320 339 aaKnown RBP40.14■■■■■ 4.02
TRIM3-206ENST00000528227 PIK3C2BO00750 1634 aa40.13■■■■■ 4.01
TRIM3-206ENST00000528227 STRCP1A6NGW2 1772 aa40.11■■■■■ 4.01
TRIM3-206ENST00000528227 TOM1O60784 492 aa40.09■■■■■ 4.01
TRIM3-206ENST00000528227 LTKP29376 864 aa40.08■■■■■ 4.01
TRIM3-206ENST00000528227 EFCAB6Q5THR3 1501 aa40.06■■■■■ 4
TRIM3-206ENST00000528227 TXNDC2Q86VQ3 553 aa40.06■■■■■ 4
TRIM3-206ENST00000528227 ILDR2Q71H61 639 aa40.05■■■■■ 4
TRIM3-206ENST00000528227 KDM5AP29375 1690 aaKnown RBP40.04■■■■■ 4
TRIM3-206ENST00000528227 SYNMO15061 1565 aa40.03■■■■■ 4
TRIM3-206ENST00000528227 PIP4K2BP78356 416 aa40.03■■■■■ 4
TRIM3-206ENST00000528227 LRRC7Q96NW7 1537 aa40.02■■■■■ 4
TRIM3-206ENST00000528227 ANKRD50Q9ULJ7 1429 aa40.02■■■■■ 4
TRIM3-206ENST00000528227 SCAF1Q9H7N4 1312 aaKnown RBP40.02■■■■■ 4
TRIM3-206ENST00000528227 NOS1P29475 1434 aa40■■■■□ 3.99
TRIM3-206ENST00000528227 TMEM2Q9UHN6 1383 aa40■■■■□ 3.99
TRIM3-206ENST00000528227 ALKQ9UM73 1620 aa40■■■■□ 3.99
TRIM3-206ENST00000528227 IDI1Q13907 227 aa39.99■■■■□ 3.99
TRIM3-206ENST00000528227 EID1Q9Y6B2 187 aa39.99■■■■□ 3.99
TRIM3-206ENST00000528227 STAG3Q9UJ98 1225 aa39.98■■■■□ 3.99
TRIM3-206ENST00000528227 HSPA1LP34931 641 aa39.95■■■■□ 3.99
TRIM3-206ENST00000528227 RPRD2Q5VT52 1461 aaKnown RBP39.91■■■■□ 3.98
TRIM3-206ENST00000528227 ADGRB3O60242 1522 aa39.9■■■■□ 3.98
TRIM3-206ENST00000528227 TET3O43151 1660 aa39.88■■■■□ 3.97
TRIM3-206ENST00000528227 SLC52A1Q9NWF4 448 aa39.86■■■■□ 3.97
TRIM3-206ENST00000528227 UNC13BO14795 1591 aa39.85■■■■□ 3.97
TRIM3-206ENST00000528227 ROCK1Q13464 1354 aa39.83■■■■□ 3.97
TRIM3-206ENST00000528227 GCC2Q8IWJ2 1684 aa39.81■■■■□ 3.96
TRIM3-206ENST00000528227 XIRP1Q702N8 1843 aaKnown RBP39.79■■■■□ 3.96
TRIM3-206ENST00000528227 SOCS7O14512 581 aa39.78■■■■□ 3.96
TRIM3-206ENST00000528227 MED1Q15648 1581 aaPredicted RBP39.73■■■■□ 3.95
TRIM3-206ENST00000528227 MYO5BQ9ULV0 1848 aa39.7■■■■□ 3.95
TRIM3-206ENST00000528227 SLC26A8Q96RN1 970 aa39.7■■■■□ 3.95
TRIM3-206ENST00000528227 E9PCH4 1651 aa39.7■■■■□ 3.95
TRIM3-206ENST00000528227 IQGAP3Q86VI3 1631 aa39.69■■■■□ 3.94
TRIM3-206ENST00000528227 ZFYVE9O95405 1425 aa39.68■■■■□ 3.94
TRIM3-206ENST00000528227 KCNA6P17658 529 aa39.68■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms