RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 MAST1Q9Y2H9 1570 aa23.78■■□□□ 1.4
EXOSC4-203ENST00000527954 NCKAP5LQ9HCH0 1330 aa23.78■■□□□ 1.4
EXOSC4-203ENST00000527954 FBXO31Q5XUX0 539 aaPredicted RBP23.77■■□□□ 1.4
EXOSC4-203ENST00000527954 KDM5DQ9BY66 1539 aa23.77■■□□□ 1.4
EXOSC4-203ENST00000527954 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
EXOSC4-203ENST00000527954 ZNF142P52746 1687 aaPredicted RBP23.73■■□□□ 1.39
EXOSC4-203ENST00000527954 FAM135AQ9P2D6 1515 aa23.73■■□□□ 1.39
EXOSC4-203ENST00000527954 TNRQ92752 1358 aa23.72■■□□□ 1.39
EXOSC4-203ENST00000527954 PZPP20742 1482 aa23.72■■□□□ 1.39
EXOSC4-203ENST00000527954 A2ML1A8K2U0 1454 aa23.7■■□□□ 1.38
EXOSC4-203ENST00000527954 PTPN23Q9H3S7 1636 aa23.7■■□□□ 1.38
EXOSC4-203ENST00000527954 PLA2R1Q13018 1463 aa23.69■■□□□ 1.38
EXOSC4-203ENST00000527954 ABCC5O15440 1437 aa23.69■■□□□ 1.38
EXOSC4-203ENST00000527954 PKD2Q13563 968 aa23.69■■□□□ 1.38
EXOSC4-203ENST00000527954 FGD6Q6ZV73 1430 aa23.67■■□□□ 1.38
EXOSC4-203ENST00000527954 RNF17Q9BXT8 1623 aaKnown RBP23.67■■□□□ 1.38
EXOSC4-203ENST00000527954 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
EXOSC4-203ENST00000527954 TCOF1Q13428 1488 aaKnown RBP23.66■■□□□ 1.38
EXOSC4-203ENST00000527954 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
EXOSC4-203ENST00000527954 LTBP4Q8N2S1 1624 aa23.66■■□□□ 1.38
EXOSC4-203ENST00000527954 DUOX2Q9NRD8 1548 aa23.65■■□□□ 1.38
EXOSC4-203ENST00000527954 EIF2AK4Q9P2K8 1649 aaKnown RBP23.65■■□□□ 1.38
EXOSC4-203ENST00000527954 DAPK1P53355 1430 aa23.64■■□□□ 1.37
EXOSC4-203ENST00000527954 KIF15Q9NS87 1388 aa23.64■■□□□ 1.37
EXOSC4-203ENST00000527954 ABCC3O15438 1527 aa23.64■■□□□ 1.37
EXOSC4-203ENST00000527954 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
EXOSC4-203ENST00000527954 ZNF335Q9H4Z2 1342 aaPredicted RBP23.61■■□□□ 1.37
EXOSC4-203ENST00000527954 CROCC2H7BZ55 1655 aa23.61■■□□□ 1.37
EXOSC4-203ENST00000527954 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
EXOSC4-203ENST00000527954 MROH1Q8NDA8 1641 aa23.61■■□□□ 1.37
EXOSC4-203ENST00000527954 ZC3H13Q5T200 1668 aaKnown RBP23.59■■□□□ 1.37
EXOSC4-203ENST00000527954 NLRP1Q9C000 1473 aa23.58■■□□□ 1.37
EXOSC4-203ENST00000527954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.36
EXOSC4-203ENST00000527954 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
EXOSC4-203ENST00000527954 ERBINQ96RT1 1412 aa23.57■■□□□ 1.36
EXOSC4-203ENST00000527954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.56■■□□□ 1.36
EXOSC4-203ENST00000527954 UGGT1Q9NYU2 1555 aa23.55■■□□□ 1.36
EXOSC4-203ENST00000527954 ANKRD30AQ9BXX3 1397 aa23.54■■□□□ 1.36
EXOSC4-203ENST00000527954 CEP152O94986 1710 aa23.54■■□□□ 1.36
EXOSC4-203ENST00000527954 SPATA31D1Q6ZQQ2 1576 aa23.54■■□□□ 1.36
EXOSC4-203ENST00000527954 FAM50AQ14320 339 aaKnown RBP23.54■■□□□ 1.36
EXOSC4-203ENST00000527954 ANKLE2Q86XL3 938 aa23.54■■□□□ 1.36
EXOSC4-203ENST00000527954 ERVK-7P63135 1459 aa23.54■■□□□ 1.36
EXOSC4-203ENST00000527954 IQSEC2Q5JU85 1478 aa23.52■■□□□ 1.36
EXOSC4-203ENST00000527954 PRDM15P57071 1507 aaPredicted RBP23.51■■□□□ 1.35
EXOSC4-203ENST00000527954 NEURL4Q96JN8 1562 aa23.51■■□□□ 1.35
EXOSC4-203ENST00000527954 POLR1AO95602 1720 aaPredicted RBP23.49■■□□□ 1.35
EXOSC4-203ENST00000527954 KANK1Q14678 1352 aa23.47■■□□□ 1.35
EXOSC4-203ENST00000527954 ARHGAP31Q2M1Z3 1444 aa23.47■■□□□ 1.35
EXOSC4-203ENST00000527954 DEPDC5O75140 1603 aa23.45■■□□□ 1.34
EXOSC4-203ENST00000527954 NPHP4O75161 1426 aaPredicted RBP23.44■■□□□ 1.34
EXOSC4-203ENST00000527954 ADGRL2O95490 1459 aa23.43■■□□□ 1.34
EXOSC4-203ENST00000527954 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
EXOSC4-203ENST00000527954 MED14O60244 1454 aa23.43■■□□□ 1.34
EXOSC4-203ENST00000527954 UBAP1LF5GYI3 381 aa23.42■■□□□ 1.34
EXOSC4-203ENST00000527954 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
EXOSC4-203ENST00000527954 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.33
EXOSC4-203ENST00000527954 LMTK2Q8IWU2 1503 aa23.38■■□□□ 1.33
EXOSC4-203ENST00000527954 UBR1Q8IWV7 1749 aa23.38■■□□□ 1.33
EXOSC4-203ENST00000527954 ANKRD50Q9ULJ7 1429 aa23.37■■□□□ 1.33
EXOSC4-203ENST00000527954 CPS1P31327 1500 aa23.36■■□□□ 1.33
EXOSC4-203ENST00000527954 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
EXOSC4-203ENST00000527954 LTKP29376 864 aa23.34■■□□□ 1.33
EXOSC4-203ENST00000527954 TXNDC2Q86VQ3 553 aa23.34■■□□□ 1.33
EXOSC4-203ENST00000527954 STAG3Q9UJ98 1225 aa23.33■■□□□ 1.33
EXOSC4-203ENST00000527954 ARHGAP23Q9P227 1491 aa23.32■■□□□ 1.32
EXOSC4-203ENST00000527954 IDI1Q13907 227 aa23.32■■□□□ 1.32
EXOSC4-203ENST00000527954 PIK3C2BO00750 1634 aa23.32■■□□□ 1.32
EXOSC4-203ENST00000527954 SCAF11Q99590 1463 aaKnown RBP23.31■■□□□ 1.32
EXOSC4-203ENST00000527954 SLIT1O75093 1534 aa23.31■■□□□ 1.32
EXOSC4-203ENST00000527954 EFCAB6Q5THR3 1501 aa23.31■■□□□ 1.32
EXOSC4-203ENST00000527954 ITGAEP38570 1179 aa23.29■■□□□ 1.32
EXOSC4-203ENST00000527954 EID1Q9Y6B2 187 aa23.29■■□□□ 1.32
EXOSC4-203ENST00000527954 NOS1P29475 1434 aa23.28■■□□□ 1.32
EXOSC4-203ENST00000527954 TMEM2Q9UHN6 1383 aa23.27■■□□□ 1.32
EXOSC4-203ENST00000527954 SYNMO15061 1565 aa23.27■■□□□ 1.32
EXOSC4-203ENST00000527954 TOM1O60784 492 aa23.26■■□□□ 1.31
EXOSC4-203ENST00000527954 PIP4K2BP78356 416 aa23.26■■□□□ 1.31
EXOSC4-203ENST00000527954 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
EXOSC4-203ENST00000527954 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
EXOSC4-203ENST00000527954 DISP3Q9P2K9 1392 aa23.26■■□□□ 1.31
EXOSC4-203ENST00000527954 SLC52A1Q9NWF4 448 aa23.23■■□□□ 1.31
EXOSC4-203ENST00000527954 STRCP1A6NGW2 1772 aa23.22■■□□□ 1.31
EXOSC4-203ENST00000527954 RPRD2Q5VT52 1461 aaKnown RBP23.22■■□□□ 1.31
EXOSC4-203ENST00000527954 LRRC7Q96NW7 1537 aa23.22■■□□□ 1.31
EXOSC4-203ENST00000527954 KDM5AP29375 1690 aaKnown RBP23.2■■□□□ 1.3
EXOSC4-203ENST00000527954 UNC13BO14795 1591 aa23.2■■□□□ 1.3
EXOSC4-203ENST00000527954 TET3O43151 1660 aa23.19■■□□□ 1.3
EXOSC4-203ENST00000527954 ADGRB3O60242 1522 aa23.19■■□□□ 1.3
EXOSC4-203ENST00000527954 HSPA1LP34931 641 aa23.17■■□□□ 1.3
EXOSC4-203ENST00000527954 NUP155O75694 1391 aa23.15■■□□□ 1.3
EXOSC4-203ENST00000527954 SLC26A8Q96RN1 970 aa23.15■■□□□ 1.3
EXOSC4-203ENST00000527954 GCC2Q8IWJ2 1684 aa23.14■■□□□ 1.29
EXOSC4-203ENST00000527954 ALKQ9UM73 1620 aa23.14■■□□□ 1.29
EXOSC4-203ENST00000527954 ILDR2Q71H61 639 aa23.12■■□□□ 1.29
EXOSC4-203ENST00000527954 BCANQ96GW7 911 aa23.12■■□□□ 1.29
EXOSC4-203ENST00000527954 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
EXOSC4-203ENST00000527954 CHGAP10645 457 aaKnown RBP23.11■■□□□ 1.29
EXOSC4-203ENST00000527954 E9PCH4 1651 aa23.11■■□□□ 1.29
EXOSC4-203ENST00000527954 IQGAP3Q86VI3 1631 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms