RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
CAPN1-213ENST00000527897 CHIC2Q9UKJ5 165 aa24.04■■□□□ 1.44
CAPN1-213ENST00000527897 KDM5DQ9BY66 1539 aa24.03■■□□□ 1.44
CAPN1-213ENST00000527897 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
CAPN1-213ENST00000527897 KIF15Q9NS87 1388 aa24.02■■□□□ 1.44
CAPN1-213ENST00000527897 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
CAPN1-213ENST00000527897 DUOX2Q9NRD8 1548 aa24■■□□□ 1.43
CAPN1-213ENST00000527897 EIF2AK4Q9P2K8 1649 aaKnown RBP23.99■■□□□ 1.43
CAPN1-213ENST00000527897 MYO3AQ8NEV4 1616 aa23.98■■□□□ 1.43
CAPN1-213ENST00000527897 RNF17Q9BXT8 1623 aaKnown RBP23.98■■□□□ 1.43
CAPN1-213ENST00000527897 STRCQ7RTU9 1775 aa23.97■■□□□ 1.43
CAPN1-213ENST00000527897 FBXO31Q5XUX0 539 aaPredicted RBP23.96■■□□□ 1.43
CAPN1-213ENST00000527897 FAM135AQ9P2D6 1515 aa23.95■■□□□ 1.43
CAPN1-213ENST00000527897 ILDR1Q86SU0 546 aaPredicted RBP23.95■■□□□ 1.42
CAPN1-213ENST00000527897 ANKRD30AQ9BXX3 1397 aa23.94■■□□□ 1.42
CAPN1-213ENST00000527897 PZPP20742 1482 aa23.93■■□□□ 1.42
CAPN1-213ENST00000527897 CAMSAP1Q5T5Y3 1602 aa23.92■■□□□ 1.42
CAPN1-213ENST00000527897 CEP170BQ9Y4F5 1589 aaPredicted RBP23.91■■□□□ 1.42
CAPN1-213ENST00000527897 ABCC3O15438 1527 aa23.91■■□□□ 1.42
CAPN1-213ENST00000527897 CEP152O94986 1710 aa23.91■■□□□ 1.42
CAPN1-213ENST00000527897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.91■■□□□ 1.422e-6■■■□□ 14.7
CAPN1-213ENST00000527897 DMRT2Q9Y5R5 561 aa23.91■■□□□ 1.42
CAPN1-213ENST00000527897 ERBINQ96RT1 1412 aa23.91■■□□□ 1.42
CAPN1-213ENST00000527897 TNRQ92752 1358 aa23.91■■□□□ 1.42
CAPN1-213ENST00000527897 ZNF142P52746 1687 aaPredicted RBP23.9■■□□□ 1.42
CAPN1-213ENST00000527897 ZC3H13Q5T200 1668 aaKnown RBP23.9■■□□□ 1.42
CAPN1-213ENST00000527897 MROH1Q8NDA8 1641 aa23.9■■□□□ 1.42
CAPN1-213ENST00000527897 NCOA1Q15788 1441 aa23.88■■□□□ 1.41
CAPN1-213ENST00000527897 CFAP65Q6ZU64 1925 aaKnown RBP23.87■■□□□ 1.41
CAPN1-213ENST00000527897 NCKAP5LQ9HCH0 1330 aa23.85■■□□□ 1.41
CAPN1-213ENST00000527897 A2ML1A8K2U0 1454 aa23.85■■□□□ 1.41
CAPN1-213ENST00000527897 ITGAEP38570 1179 aa23.84■■□□□ 1.41
CAPN1-213ENST00000527897 ADGRL2O95490 1459 aa23.83■■□□□ 1.41
CAPN1-213ENST00000527897 PRDM15P57071 1507 aaPredicted RBP23.83■■□□□ 1.41
CAPN1-213ENST00000527897 KANK1Q14678 1352 aa23.82■■□□□ 1.4
CAPN1-213ENST00000527897 PTPRTO14522 1441 aa23.8■■□□□ 1.4
CAPN1-213ENST00000527897 DEPDC5O75140 1603 aa23.8■■□□□ 1.4
CAPN1-213ENST00000527897 ERVK-7P63135 1459 aa23.78■■□□□ 1.4
CAPN1-213ENST00000527897 PLA2R1Q13018 1463 aa23.78■■□□□ 1.4
CAPN1-213ENST00000527897 CERKQ8TCT0 537 aa23.77■■□□□ 1.4
CAPN1-213ENST00000527897 FBXO41Q8TF61 875 aa23.77■■□□□ 1.4
CAPN1-213ENST00000527897 ANKRD50Q9ULJ7 1429 aa23.76■■□□□ 1.39
CAPN1-213ENST00000527897 NLRP1Q9C000 1473 aa23.76■■□□□ 1.39
CAPN1-213ENST00000527897 SPATA31D1Q6ZQQ2 1576 aa23.76■■□□□ 1.39
CAPN1-213ENST00000527897 PKD2Q13563 968 aa23.75■■□□□ 1.39
CAPN1-213ENST00000527897 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
CAPN1-213ENST00000527897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.39
CAPN1-213ENST00000527897 THEMISQ8N1K5 641 aaPredicted RBP23.72■■□□□ 1.39
CAPN1-213ENST00000527897 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
CAPN1-213ENST00000527897 POLR1AO95602 1720 aaPredicted RBP23.7■■□□□ 1.38
CAPN1-213ENST00000527897 VWDEQ8N2E2 1590 aa23.68■■□□□ 1.38
CAPN1-213ENST00000527897 ROCK1Q13464 1354 aa23.67■■□□□ 1.38
CAPN1-213ENST00000527897 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
CAPN1-213ENST00000527897 LMTK2Q8IWU2 1503 aa23.67■■□□□ 1.38
CAPN1-213ENST00000527897 EFCAB6Q5THR3 1501 aa23.64■■□□□ 1.38
CAPN1-213ENST00000527897 ZNF335Q9H4Z2 1342 aaPredicted RBP23.64■■□□□ 1.38
CAPN1-213ENST00000527897 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
CAPN1-213ENST00000527897 NEURL4Q96JN8 1562 aa23.62■■□□□ 1.37
CAPN1-213ENST00000527897 RRBP1Q9P2E9 1410 aaKnown RBP23.62■■□□□ 1.37
CAPN1-213ENST00000527897 STAG3Q9UJ98 1225 aa23.62■■□□□ 1.37
CAPN1-213ENST00000527897 LTBP4Q8N2S1 1624 aa23.62■■□□□ 1.37
CAPN1-213ENST00000527897 UNC13BO14795 1591 aa23.61■■□□□ 1.37
CAPN1-213ENST00000527897 PIK3C2BO00750 1634 aa23.59■■□□□ 1.37
CAPN1-213ENST00000527897 TET3O43151 1660 aa23.58■■□□□ 1.37
CAPN1-213ENST00000527897 NPHP4O75161 1426 aaPredicted RBP23.57■■□□□ 1.36
CAPN1-213ENST00000527897 SYNMO15061 1565 aa23.57■■□□□ 1.36
CAPN1-213ENST00000527897 IDI1Q13907 227 aa23.56■■□□□ 1.36
CAPN1-213ENST00000527897 GCC2Q8IWJ2 1684 aa23.55■■□□□ 1.36
CAPN1-213ENST00000527897 IQGAP1P46940 1657 aa23.54■■□□□ 1.36
CAPN1-213ENST00000527897 NUP155O75694 1391 aa23.54■■□□□ 1.36
CAPN1-213ENST00000527897 NOS1P29475 1434 aa23.53■■□□□ 1.36
CAPN1-213ENST00000527897 MED14O60244 1454 aa23.52■■□□□ 1.36
CAPN1-213ENST00000527897 RPRD2Q5VT52 1461 aaKnown RBP23.52■■□□□ 1.36
CAPN1-213ENST00000527897 TXNDC2Q86VQ3 553 aa23.52■■□□□ 1.36
CAPN1-213ENST00000527897 IQGAP3Q86VI3 1631 aa23.51■■□□□ 1.35
CAPN1-213ENST00000527897 EID1Q9Y6B2 187 aa23.51■■□□□ 1.35
CAPN1-213ENST00000527897 SCAF11Q99590 1463 aaKnown RBP23.5■■□□□ 1.35
CAPN1-213ENST00000527897 LTKP29376 864 aa23.5■■□□□ 1.35
CAPN1-213ENST00000527897 E9PCH4 1651 aa23.5■■□□□ 1.35
CAPN1-213ENST00000527897 SLC52A1Q9NWF4 448 aa23.49■■□□□ 1.35
CAPN1-213ENST00000527897 SLIT1O75093 1534 aa23.49■■□□□ 1.35
CAPN1-213ENST00000527897 ARHGAP23Q9P227 1491 aa23.48■■□□□ 1.35
CAPN1-213ENST00000527897 TMEM2Q9UHN6 1383 aa23.47■■□□□ 1.35
CAPN1-213ENST00000527897 ADGRB3O60242 1522 aa23.47■■□□□ 1.35
CAPN1-213ENST00000527897 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
CAPN1-213ENST00000527897 KDM5AP29375 1690 aaKnown RBP23.46■■□□□ 1.35
CAPN1-213ENST00000527897 IQSEC2Q5JU85 1478 aa23.45■■□□□ 1.34
CAPN1-213ENST00000527897 NAIPQ13075 1403 aa23.44■■□□□ 1.34
CAPN1-213ENST00000527897 MYO5BQ9ULV0 1848 aa23.43■■□□□ 1.34
CAPN1-213ENST00000527897 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-213ENST00000527897 CPS1P31327 1500 aa23.42■■□□□ 1.34
CAPN1-213ENST00000527897 UBAP1LF5GYI3 381 aa23.41■■□□□ 1.34
CAPN1-213ENST00000527897 BCANQ96GW7 911 aa23.41■■□□□ 1.34
CAPN1-213ENST00000527897 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
CAPN1-213ENST00000527897 HFM1A2PYH4 1435 aa23.38■■□□□ 1.33
CAPN1-213ENST00000527897 STRCP1A6NGW2 1772 aa23.37■■□□□ 1.33
CAPN1-213ENST00000527897 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
CAPN1-213ENST00000527897 TMEM131LA2VDJ0 1609 aa23.36■■□□□ 1.33
CAPN1-213ENST00000527897 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
CAPN1-213ENST00000527897 SCAF1Q9H7N4 1312 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms