RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PKD2Q13563 968 aa22.17■■□□□ 1.14
CAPN1-212ENST00000527887 KDM5DQ9BY66 1539 aa22.16■■□□□ 1.14
CAPN1-212ENST00000527887 PLA2R1Q13018 1463 aa22.14■■□□□ 1.13
CAPN1-212ENST00000527887 CAMSAP1Q5T5Y3 1602 aa22.13■■□□□ 1.13
CAPN1-212ENST00000527887 PZPP20742 1482 aa22.13■■□□□ 1.13
CAPN1-212ENST00000527887 TNRQ92752 1358 aa22.11■■□□□ 1.13
CAPN1-212ENST00000527887 A2ML1A8K2U0 1454 aa22.1■■□□□ 1.13
CAPN1-212ENST00000527887 FBXO31Q5XUX0 539 aaPredicted RBP22.1■■□□□ 1.13
CAPN1-212ENST00000527887 CEP170BQ9Y4F5 1589 aaPredicted RBP22.1■■□□□ 1.13
CAPN1-212ENST00000527887 MYO3AQ8NEV4 1616 aa22.09■■□□□ 1.13
CAPN1-212ENST00000527887 SHANK2Q9UPX8 1470 aa22.09■■□□□ 1.13
CAPN1-212ENST00000527887 ZNF142P52746 1687 aaPredicted RBP22.09■■□□□ 1.13
CAPN1-212ENST00000527887 NCKAP5LQ9HCH0 1330 aa22.08■■□□□ 1.13
CAPN1-212ENST00000527887 ABCC5O15440 1437 aa22.08■■□□□ 1.13
CAPN1-212ENST00000527887 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.13
CAPN1-212ENST00000527887 DUOX2Q9NRD8 1548 aa22.08■■□□□ 1.13
CAPN1-212ENST00000527887 TCOF1Q13428 1488 aaKnown RBP22.07■■□□□ 1.12
CAPN1-212ENST00000527887 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
CAPN1-212ENST00000527887 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
CAPN1-212ENST00000527887 RNF17Q9BXT8 1623 aaKnown RBP22.06■■□□□ 1.12
CAPN1-212ENST00000527887 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
CAPN1-212ENST00000527887 THEMISQ8N1K5 641 aaPredicted RBP22.05■■□□□ 1.12
CAPN1-212ENST00000527887 NLRP1Q9C000 1473 aa22.04■■□□□ 1.12
CAPN1-212ENST00000527887 DAPK1P53355 1430 aa22.04■■□□□ 1.12
CAPN1-212ENST00000527887 RRP7BPQ9NSQ0 103 aa22.03■■□□□ 1.12
CAPN1-212ENST00000527887 ERBINQ96RT1 1412 aa22.03■■□□□ 1.12
CAPN1-212ENST00000527887 ABCC3O15438 1527 aa22.01■■□□□ 1.11
CAPN1-212ENST00000527887 DNMT1P26358 1616 aaKnown RBP22.01■■□□□ 1.11
CAPN1-212ENST00000527887 IQSEC2Q5JU85 1478 aa22.01■■□□□ 1.11
CAPN1-212ENST00000527887 ANKRD30AQ9BXX3 1397 aa22■■□□□ 1.11
CAPN1-212ENST00000527887 ZC3H13Q5T200 1668 aaKnown RBP22■■□□□ 1.11
CAPN1-212ENST00000527887 LTBP4Q8N2S1 1624 aa21.99■■□□□ 1.11
CAPN1-212ENST00000527887 ANKLE2Q86XL3 938 aa21.99■■□□□ 1.11
CAPN1-212ENST00000527887 ARHGAP31Q2M1Z3 1444 aa21.96■■□□□ 1.11
CAPN1-212ENST00000527887 KANK1Q14678 1352 aa21.95■■□□□ 1.1
CAPN1-212ENST00000527887 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
CAPN1-212ENST00000527887 MROH1Q8NDA8 1641 aa21.95■■□□□ 1.1
CAPN1-212ENST00000527887 CHIC2Q9UKJ5 165 aa21.94■■□□□ 1.1
CAPN1-212ENST00000527887 ZNF335Q9H4Z2 1342 aaPredicted RBP21.94■■□□□ 1.1
CAPN1-212ENST00000527887 UGGT1Q9NYU2 1555 aa21.94■■□□□ 1.1
CAPN1-212ENST00000527887 CROCC2H7BZ55 1655 aa21.94■■□□□ 1.1
CAPN1-212ENST00000527887 ERVK-7P63135 1459 aa21.93■■□□□ 1.1
CAPN1-212ENST00000527887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.93■■□□□ 1.1
CAPN1-212ENST00000527887 PRDM15P57071 1507 aaPredicted RBP21.92■■□□□ 1.1
CAPN1-212ENST00000527887 FAM50AQ14320 339 aaKnown RBP21.91■■□□□ 1.1
CAPN1-212ENST00000527887 ADGRL2O95490 1459 aa21.9■■□□□ 1.1
CAPN1-212ENST00000527887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.9■■□□□ 1.1
CAPN1-212ENST00000527887 MED14O60244 1454 aa21.88■■□□□ 1.09
CAPN1-212ENST00000527887 DEPDC5O75140 1603 aa21.85■■□□□ 1.09
CAPN1-212ENST00000527887 LMTK2Q8IWU2 1503 aa21.85■■□□□ 1.09
CAPN1-212ENST00000527887 NEURL4Q96JN8 1562 aa21.84■■□□□ 1.09
CAPN1-212ENST00000527887 NPHP4O75161 1426 aaPredicted RBP21.84■■□□□ 1.09
CAPN1-212ENST00000527887 CEP152O94986 1710 aa21.82■■□□□ 1.08
CAPN1-212ENST00000527887 POLR1AO95602 1720 aaPredicted RBP21.82■■□□□ 1.08
CAPN1-212ENST00000527887 ANKRD50Q9ULJ7 1429 aa21.81■■□□□ 1.08
CAPN1-212ENST00000527887 CPS1P31327 1500 aa21.81■■□□□ 1.08
CAPN1-212ENST00000527887 VWDEQ8N2E2 1590 aa21.81■■□□□ 1.08
CAPN1-212ENST00000527887 UBAP1LF5GYI3 381 aa21.8■■□□□ 1.08
CAPN1-212ENST00000527887 EID1Q9Y6B2 187 aa21.78■■□□□ 1.08
CAPN1-212ENST00000527887 ROCK1Q13464 1354 aa21.77■■□□□ 1.08
CAPN1-212ENST00000527887 SLC52A1Q9NWF4 448 aa21.77■■□□□ 1.08
CAPN1-212ENST00000527887 STAG3Q9UJ98 1225 aa21.77■■□□□ 1.08
CAPN1-212ENST00000527887 TXNDC2Q86VQ3 553 aa21.76■■□□□ 1.07
CAPN1-212ENST00000527887 ARHGAP23Q9P227 1491 aa21.76■■□□□ 1.07
CAPN1-212ENST00000527887 SLIT1O75093 1534 aa21.75■■□□□ 1.07
CAPN1-212ENST00000527887 IDI1Q13907 227 aa21.75■■□□□ 1.07
CAPN1-212ENST00000527887 SCAF11Q99590 1463 aaKnown RBP21.75■■□□□ 1.07
CAPN1-212ENST00000527887 TOM1O60784 492 aa21.74■■□□□ 1.07
CAPN1-212ENST00000527887 NOS1P29475 1434 aa21.73■■□□□ 1.07
CAPN1-212ENST00000527887 RPRD2Q5VT52 1461 aaKnown RBP21.73■■□□□ 1.07
CAPN1-212ENST00000527887 UBR1Q8IWV7 1749 aa21.73■■□□□ 1.07
CAPN1-212ENST00000527887 LTKP29376 864 aa21.73■■□□□ 1.07
CAPN1-212ENST00000527887 TMEM2Q9UHN6 1383 aa21.73■■□□□ 1.07
CAPN1-212ENST00000527887 EFCAB6Q5THR3 1501 aa21.72■■□□□ 1.07
CAPN1-212ENST00000527887 IQGAP1P46940 1657 aa21.71■■□□□ 1.07
CAPN1-212ENST00000527887 CFAP65Q6ZU64 1925 aaKnown RBP21.69■■□□□ 1.06
CAPN1-212ENST00000527887 KDM5AP29375 1690 aaKnown RBP21.68■■□□□ 1.06
CAPN1-212ENST00000527887 PIK3C2BO00750 1634 aa21.66■■□□□ 1.06
CAPN1-212ENST00000527887 HDGFP51858 240 aaKnown RBP21.64■■□□□ 1.05
CAPN1-212ENST00000527887 SYNMO15061 1565 aa21.63■■□□□ 1.05
CAPN1-212ENST00000527887 PPARGC1BQ86YN6 1023 aaKnown RBP21.63■■□□□ 1.05
CAPN1-212ENST00000527887 ITGAEP38570 1179 aa21.62■■□□□ 1.05
CAPN1-212ENST00000527887 UNC13BO14795 1591 aa21.61■■□□□ 1.05
CAPN1-212ENST00000527887 LRRC7Q96NW7 1537 aa21.6■■□□□ 1.05
CAPN1-212ENST00000527887 TET3O43151 1660 aa21.6■■□□□ 1.05
CAPN1-212ENST00000527887 NUP155O75694 1391 aa21.6■■□□□ 1.05
CAPN1-212ENST00000527887 DISP3Q9P2K9 1392 aa21.6■■□□□ 1.05
CAPN1-212ENST00000527887 ADGRB3O60242 1522 aa21.6■■□□□ 1.05
CAPN1-212ENST00000527887 PIP4K2BP78356 416 aa21.59■■□□□ 1.05
CAPN1-212ENST00000527887 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
CAPN1-212ENST00000527887 RRBP1Q9P2E9 1410 aaKnown RBP21.57■■□□□ 1.04
CAPN1-212ENST00000527887 KCNA6P17658 529 aa21.56■■□□□ 1.04
CAPN1-212ENST00000527887 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.56■■□□□ 1.04
CAPN1-212ENST00000527887 GCC2Q8IWJ2 1684 aa21.53■■□□□ 1.04
CAPN1-212ENST00000527887 HSPA1LP34931 641 aa21.53■■□□□ 1.04
CAPN1-212ENST00000527887 SLC26A8Q96RN1 970 aa21.53■■□□□ 1.04
CAPN1-212ENST00000527887 IQGAP3Q86VI3 1631 aa21.53■■□□□ 1.04
CAPN1-212ENST00000527887 BCANQ96GW7 911 aa21.52■■□□□ 1.04
CAPN1-212ENST00000527887 ZFYVE9O95405 1425 aa21.52■■□□□ 1.04
CAPN1-212ENST00000527887 PLEKHG1Q9ULL1 1385 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms