RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TSPY4P0CV99 314 aa27.73■■■□□ 2.03
CKLF-CMTM1-202ENST00000527845 TSPY10P0CW01 314 aa27.73■■■□□ 2.03
CKLF-CMTM1-202ENST00000527845 TCOF1Q13428 1488 aaKnown RBP27.72■■■□□ 2.03
CKLF-CMTM1-202ENST00000527845 KIF3BO15066 747 aa27.72■■■□□ 2.03
CKLF-CMTM1-202ENST00000527845 MAST1Q9Y2H9 1570 aa27.72■■■□□ 2.03
CKLF-CMTM1-202ENST00000527845 PZPP20742 1482 aa27.71■■■□□ 2.03
CKLF-CMTM1-202ENST00000527845 MIA2Q96PC5 1412 aa27.67■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 DNMT1P26358 1616 aaKnown RBP27.67■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 NCKAP5LQ9HCH0 1330 aa27.67■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 EIF2AK4Q9P2K8 1649 aaKnown RBP27.66■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 TNRQ92752 1358 aa27.65■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 RNF17Q9BXT8 1623 aaKnown RBP27.65■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 ZC3H13Q5T200 1668 aaKnown RBP27.65■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 WASHC2CQ9Y4E1 1318 aa27.65■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 MYOM3Q5VTT5 1437 aa27.64■■■□□ 2.02
CKLF-CMTM1-202ENST00000527845 POLR1AO95602 1720 aaPredicted RBP27.63■■■□□ 2.01
CKLF-CMTM1-202ENST00000527845 NLRP1Q9C000 1473 aa27.59■■■□□ 2.01
CKLF-CMTM1-202ENST00000527845 KANK4Q5T7N3 995 aaPredicted RBP27.56■■■□□ 2
CKLF-CMTM1-202ENST00000527845 ZNF335Q9H4Z2 1342 aaPredicted RBP27.56■■■□□ 2
CKLF-CMTM1-202ENST00000527845 ABCC3O15438 1527 aa27.54■■■□□ 2
CKLF-CMTM1-202ENST00000527845 FBXO31Q5XUX0 539 aaPredicted RBP27.54■■■□□ 2
CKLF-CMTM1-202ENST00000527845 DUOX2Q9NRD8 1548 aa27.53■■■□□ 2
CKLF-CMTM1-202ENST00000527845 APLP2Q06481 763 aa27.52■■■□□ 2
CKLF-CMTM1-202ENST00000527845 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
CKLF-CMTM1-202ENST00000527845 NEURL4Q96JN8 1562 aa27.52■■■□□ 2
CKLF-CMTM1-202ENST00000527845 UGGT1Q9NYU2 1555 aa27.52■■■□□ 2
CKLF-CMTM1-202ENST00000527845 SHANK2Q9UPX8 1470 aa27.51■■■□□ 2
CKLF-CMTM1-202ENST00000527845 THEMISQ8N1K5 641 aaPredicted RBP27.5■■□□□ 1.99
CKLF-CMTM1-202ENST00000527845 SPATA31D1Q6ZQQ2 1576 aa27.5■■□□□ 1.99
CKLF-CMTM1-202ENST00000527845 DEPDC5O75140 1603 aa27.49■■□□□ 1.99
CKLF-CMTM1-202ENST00000527845 MROH1Q8NDA8 1641 aa27.49■■□□□ 1.99
CKLF-CMTM1-202ENST00000527845 PTPN23Q9H3S7 1636 aa27.48■■□□□ 1.99
CKLF-CMTM1-202ENST00000527845 CPS1P31327 1500 aa27.46■■□□□ 1.99
CKLF-CMTM1-202ENST00000527845 ANKLE2Q86XL3 938 aa27.46■■□□□ 1.99
CKLF-CMTM1-202ENST00000527845 CEP152O94986 1710 aa27.45■■□□□ 1.99
CKLF-CMTM1-202ENST00000527845 ERBINQ96RT1 1412 aa27.44■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.44■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 ERVK-7P63135 1459 aa27.44■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 PRDM15P57071 1507 aaPredicted RBP27.43■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 MED14O60244 1454 aa27.43■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 DISP3Q9P2K9 1392 aa27.42■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 KIF15Q9NS87 1388 aa27.41■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 UBAP1LF5GYI3 381 aa27.41■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 ABCC5O15440 1437 aa27.4■■□□□ 1.98
CKLF-CMTM1-202ENST00000527845 NPHP4O75161 1426 aaPredicted RBP27.39■■□□□ 1.97
CKLF-CMTM1-202ENST00000527845 IQGAP1P46940 1657 aa27.38■■□□□ 1.97
CKLF-CMTM1-202ENST00000527845 DAPK1P53355 1430 aa27.38■■□□□ 1.97
CKLF-CMTM1-202ENST00000527845 FGD6Q6ZV73 1430 aa27.38■■□□□ 1.97
CKLF-CMTM1-202ENST00000527845 ARHGAP31Q2M1Z3 1444 aa27.36■■□□□ 1.97
CKLF-CMTM1-202ENST00000527845 VWDEQ8N2E2 1590 aa27.35■■□□□ 1.97
CKLF-CMTM1-202ENST00000527845 UBR1Q8IWV7 1749 aa27.34■■□□□ 1.97
CKLF-CMTM1-202ENST00000527845 KANK1Q14678 1352 aa27.31■■□□□ 1.96
CKLF-CMTM1-202ENST00000527845 CFAP65Q6ZU64 1925 aaKnown RBP27.3■■□□□ 1.96
CKLF-CMTM1-202ENST00000527845 ANKRD30AQ9BXX3 1397 aa27.3■■□□□ 1.96
CKLF-CMTM1-202ENST00000527845 RRP7BPQ9NSQ0 103 aa27.29■■□□□ 1.96
CKLF-CMTM1-202ENST00000527845 TOM1O60784 492 aa27.28■■□□□ 1.96
CKLF-CMTM1-202ENST00000527845 SYNMO15061 1565 aa27.26■■□□□ 1.96
CKLF-CMTM1-202ENST00000527845 SCAF11Q99590 1463 aaKnown RBP27.25■■□□□ 1.95
CKLF-CMTM1-202ENST00000527845 SLIT1O75093 1534 aa27.25■■□□□ 1.95
CKLF-CMTM1-202ENST00000527845 LMTK2Q8IWU2 1503 aa27.25■■□□□ 1.95
CKLF-CMTM1-202ENST00000527845 KDM5AP29375 1690 aaKnown RBP27.24■■□□□ 1.95
CKLF-CMTM1-202ENST00000527845 ARHGAP23Q9P227 1491 aa27.23■■□□□ 1.95
CKLF-CMTM1-202ENST00000527845 ADGRL2O95490 1459 aa27.22■■□□□ 1.95
CKLF-CMTM1-202ENST00000527845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.2■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 PIK3C2BO00750 1634 aa27.19■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 STRCP1A6NGW2 1772 aa27.17■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 ILDR2Q71H61 639 aa27.17■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 CHIC2Q9UKJ5 165 aa27.16■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 EFCAB6Q5THR3 1501 aa27.16■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 EID1Q9Y6B2 187 aa27.15■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 LRRC7Q96NW7 1537 aa27.15■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 PIP4K2BP78356 416 aa27.14■■□□□ 1.94
CKLF-CMTM1-202ENST00000527845 SOCS7O14512 581 aa27.13■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 TXNDC2Q86VQ3 553 aa27.13■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 TMEM2Q9UHN6 1383 aa27.11■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 STAG3Q9UJ98 1225 aa27.11■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 ALKQ9UM73 1620 aa27.09■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 RPRD2Q5VT52 1461 aaKnown RBP27.09■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 LTKP29376 864 aa27.09■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 HSPA1LP34931 641 aa27.09■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 FAM50AQ14320 339 aaKnown RBP27.09■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 NOS1P29475 1434 aa27.08■■□□□ 1.93
CKLF-CMTM1-202ENST00000527845 ANKRD50Q9ULJ7 1429 aa27.07■■□□□ 1.92
CKLF-CMTM1-202ENST00000527845 ADGRB3O60242 1522 aa27.07■■□□□ 1.92
CKLF-CMTM1-202ENST00000527845 MED1Q15648 1581 aaPredicted RBP27.04■■□□□ 1.92
CKLF-CMTM1-202ENST00000527845 TET3O43151 1660 aa27.04■■□□□ 1.92
CKLF-CMTM1-202ENST00000527845 IDI1Q13907 227 aa27.03■■□□□ 1.92
CKLF-CMTM1-202ENST00000527845 SLC52A1Q9NWF4 448 aa27.03■■□□□ 1.92
CKLF-CMTM1-202ENST00000527845 GCC2Q8IWJ2 1684 aa27.01■■□□□ 1.91
CKLF-CMTM1-202ENST00000527845 UNC13BO14795 1591 aa27■■□□□ 1.91
CKLF-CMTM1-202ENST00000527845 XIRP1Q702N8 1843 aaKnown RBP26.98■■□□□ 1.91
CKLF-CMTM1-202ENST00000527845 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
CKLF-CMTM1-202ENST00000527845 NWD1Q149M9 1564 aa26.92■■□□□ 1.9
CKLF-CMTM1-202ENST00000527845 NKTRP30414 1462 aaKnown RBP26.91■■□□□ 1.9
CKLF-CMTM1-202ENST00000527845 KCNA6P17658 529 aa26.9■■□□□ 1.9
CKLF-CMTM1-202ENST00000527845 HDGFP51858 240 aaKnown RBP26.89■■□□□ 1.9
CKLF-CMTM1-202ENST00000527845 IQGAP3Q86VI3 1631 aa26.89■■□□□ 1.9
CKLF-CMTM1-202ENST00000527845 MYO5BQ9ULV0 1848 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms