RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TRPM1Q7Z4N2 1603 aa21.18■□□□□ 0.98
USH1C-207ENST00000527720 RTEL1-TNFRSF6BF6WH68 1400 aa21.15■□□□□ 0.98
USH1C-207ENST00000527720 NEFLP07196 543 aa21.15■□□□□ 0.98
USH1C-207ENST00000527720 LAMC1P11047 1609 aa21.15■□□□□ 0.98
USH1C-207ENST00000527720 HNRNPUQ00839 825 aaKnown RBP eCLIP21.15■□□□□ 0.98
USH1C-207ENST00000527720 PLA2R1Q13018 1463 aa21.15■□□□□ 0.98
USH1C-207ENST00000527720 CARD11Q9BXL7 1154 aa21.15■□□□□ 0.98
USH1C-207ENST00000527720 DCAF11Q8TEB1 546 aa21.14■□□□□ 0.97
USH1C-207ENST00000527720 DHX29Q7Z478 1369 aaKnown RBP21.14■□□□□ 0.97
USH1C-207ENST00000527720 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
USH1C-207ENST00000527720 PRAG1Q86YV5 1406 aa21.13■□□□□ 0.97
USH1C-207ENST00000527720 ABCA9Q8IUA7 1624 aa21.12■□□□□ 0.97
USH1C-207ENST00000527720 FKBP8Q14318 412 aa21.12■□□□□ 0.97
USH1C-207ENST00000527720 TRAPPC8Q9Y2L5 1435 aa21.12■□□□□ 0.97
USH1C-207ENST00000527720 EIF2AK4Q9P2K8 1649 aaKnown RBP21.11■□□□□ 0.97
USH1C-207ENST00000527720 ZFYVE16Q7Z3T8 1539 aa21.1■□□□□ 0.97
USH1C-207ENST00000527720 MRS2Q9HD23 443 aa21.09■□□□□ 0.97
USH1C-207ENST00000527720 KDM2AQ9Y2K7 1162 aa21.09■□□□□ 0.97
USH1C-207ENST00000527720 E9PCH4 1651 aa21.09■□□□□ 0.97
USH1C-207ENST00000527720 CCDC184Q52MB2 194 aa21.08■□□□□ 0.97
USH1C-207ENST00000527720 DEPDC5O75140 1603 aa21.08■□□□□ 0.97
USH1C-207ENST00000527720 A2MP01023 1474 aa21.08■□□□□ 0.96
USH1C-207ENST00000527720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.08■□□□□ 0.96
USH1C-207ENST00000527720 GPRASP1Q5JY77 1395 aa21.07■□□□□ 0.96
USH1C-207ENST00000527720 INO80Q9ULG1 1556 aaPredicted RBP21.05■□□□□ 0.96
USH1C-207ENST00000527720 SPAG9O60271 1321 aaKnown RBP21.05■□□□□ 0.96
USH1C-207ENST00000527720 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
USH1C-207ENST00000527720 ST20-MTHFSA0A0A6YYL1 179 aa21.03■□□□□ 0.96
USH1C-207ENST00000527720 ZBED9Q6R2W3 1325 aa21.02■□□□□ 0.96
USH1C-207ENST00000527720 KTN1Q86UP2 1357 aaKnown RBP21.02■□□□□ 0.96
USH1C-207ENST00000527720 FANCAO15360 1455 aa21.02■□□□□ 0.96
USH1C-207ENST00000527720 ATP7AQ04656 1500 aa21.02■□□□□ 0.95
USH1C-207ENST00000527720 SPHKAPQ2M3C7 1700 aa21.01■□□□□ 0.95
USH1C-207ENST00000527720 CEP152O94986 1710 aa21.01■□□□□ 0.95
USH1C-207ENST00000527720 TET3O43151 1660 aa21.01■□□□□ 0.95
USH1C-207ENST00000527720 FAM9BQ8IZU0 186 aa21■□□□□ 0.95
USH1C-207ENST00000527720 RNF17Q9BXT8 1623 aaKnown RBP21■□□□□ 0.95
USH1C-207ENST00000527720 TRPM2O94759 1503 aa21■□□□□ 0.95
USH1C-207ENST00000527720 POLR3GLQ9BT43 218 aa20.99■□□□□ 0.95
USH1C-207ENST00000527720 VWDEQ8N2E2 1590 aa20.97■□□□□ 0.95
USH1C-207ENST00000527720 RGL3Q3MIN7 710 aa20.97■□□□□ 0.95
USH1C-207ENST00000527720 AFAP1Q8N556 730 aa20.96■□□□□ 0.95
USH1C-207ENST00000527720 BCANQ96GW7 911 aa20.95■□□□□ 0.95
USH1C-207ENST00000527720 ADGRL1O94910 1474 aa20.95■□□□□ 0.94
USH1C-207ENST00000527720 PTPRTO14522 1441 aa20.95■□□□□ 0.94
USH1C-207ENST00000527720 ASXL2Q76L83 1435 aa20.95■□□□□ 0.94
USH1C-207ENST00000527720 COL17A1Q9UMD9 1497 aaPredicted RBP20.93■□□□□ 0.94
USH1C-207ENST00000527720 STAC3Q96MF2 364 aa20.93■□□□□ 0.94
USH1C-207ENST00000527720 NEURL4Q96JN8 1562 aa20.93■□□□□ 0.94
USH1C-207ENST00000527720 ERICH6BQ5W0A0 696 aa20.93■□□□□ 0.94
USH1C-207ENST00000527720 MADDQ8WXG6 1647 aa20.92■□□□□ 0.94
USH1C-207ENST00000527720 KANK1Q14678 1352 aa20.92■□□□□ 0.94
USH1C-207ENST00000527720 RALBP1Q15311 655 aa20.91■□□□□ 0.94
USH1C-207ENST00000527720 NBPF1Q3BBV0 1214 aa20.91■□□□□ 0.94
USH1C-207ENST00000527720 CFAP74Q9C0B2 1584 aa20.91■□□□□ 0.94
USH1C-207ENST00000527720 SCAPERQ9BY12 1400 aa20.91■□□□□ 0.94
USH1C-207ENST00000527720 CLTCL1P53675 1640 aa20.9■□□□□ 0.94
USH1C-207ENST00000527720 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
USH1C-207ENST00000527720 IQGAP1P46940 1657 aa20.89■□□□□ 0.93
USH1C-207ENST00000527720 KIDINS220Q9ULH0 1771 aa20.88■□□□□ 0.93
USH1C-207ENST00000527720 BRD4O60885 1362 aaPredicted RBP20.88■□□□□ 0.93
USH1C-207ENST00000527720 MROH1Q8NDA8 1641 aa20.88■□□□□ 0.93
USH1C-207ENST00000527720 MYBBP1AQ9BQG0 1328 aaKnown RBP20.87■□□□□ 0.93
USH1C-207ENST00000527720 KIAA1210Q9ULL0 1709 aa20.87■□□□□ 0.93
USH1C-207ENST00000527720 TESK2Q96S53 571 aa20.85■□□□□ 0.93
USH1C-207ENST00000527720 WASHC2CQ9Y4E1 1318 aa20.85■□□□□ 0.93
USH1C-207ENST00000527720 PNISRQ8TF01 805 aaKnown RBP20.85■□□□□ 0.93
USH1C-207ENST00000527720 ZNF518AQ6AHZ1 1483 aa20.85■□□□□ 0.93
USH1C-207ENST00000527720 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
USH1C-207ENST00000527720 TMC1Q8TDI8 760 aa20.84■□□□□ 0.93
USH1C-207ENST00000527720 KIF1BO60333 1816 aa20.83■□□□□ 0.92
USH1C-207ENST00000527720 LRPPRCP42704 1394 aaKnown RBP20.82■□□□□ 0.92
USH1C-207ENST00000527720 PARD3Q8TEW0 1356 aa20.82■□□□□ 0.92
USH1C-207ENST00000527720 SMG6Q86US8 1419 aaKnown RBP20.82■□□□□ 0.92
USH1C-207ENST00000527720 NPM1P06748 294 aaKnown RBP eCLIP20.81■□□□□ 0.92
USH1C-207ENST00000527720 TMF1P82094 1093 aa20.81■□□□□ 0.92
USH1C-207ENST00000527720 EFCAB6Q5THR3 1501 aa20.8■□□□□ 0.92
USH1C-207ENST00000527720 LMTK2Q8IWU2 1503 aa20.8■□□□□ 0.92
USH1C-207ENST00000527720 DISP3Q9P2K9 1392 aa20.8■□□□□ 0.92
USH1C-207ENST00000527720 KIF3BO15066 747 aa20.8■□□□□ 0.92
USH1C-207ENST00000527720 PER1O15534 1290 aaPredicted RBP20.79■□□□□ 0.92
USH1C-207ENST00000527720 IFT172Q9UG01 1749 aa20.77■□□□□ 0.92
USH1C-207ENST00000527720 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
USH1C-207ENST00000527720 NLRP13Q86W25 1043 aa20.76■□□□□ 0.91
USH1C-207ENST00000527720 MYT1LQ9UL68 1186 aa20.76■□□□□ 0.91
USH1C-207ENST00000527720 SCAF11Q99590 1463 aaKnown RBP20.76■□□□□ 0.91
USH1C-207ENST00000527720 PPRC1Q5VV67 1664 aaKnown RBP20.75■□□□□ 0.91
USH1C-207ENST00000527720 MYOM2P54296 1465 aa20.75■□□□□ 0.91
USH1C-207ENST00000527720 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
USH1C-207ENST00000527720 CD109Q6YHK3 1445 aa20.74■□□□□ 0.91
USH1C-207ENST00000527720 MLH3Q9UHC1 1453 aa20.74■□□□□ 0.91
USH1C-207ENST00000527720 POGZQ7Z3K3 1410 aa20.74■□□□□ 0.91
USH1C-207ENST00000527720 HECW2Q9P2P5 1572 aa20.74■□□□□ 0.91
USH1C-207ENST00000527720 NUDCQ9Y266 331 aa20.74■□□□□ 0.91
USH1C-207ENST00000527720 PPP4R2Q9NY27 417 aa20.73■□□□□ 0.91
USH1C-207ENST00000527720 ZMYM4Q5VZL5 1548 aa20.73■□□□□ 0.91
USH1C-207ENST00000527720 INSRP06213 1382 aa20.72■□□□□ 0.91
USH1C-207ENST00000527720 SYNMO15061 1565 aa20.72■□□□□ 0.91
USH1C-207ENST00000527720 EIF3AQ14152 1382 aaKnown RBP20.71■□□□□ 0.91
USH1C-207ENST00000527720 CDCA8Q53HL2 280 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms