RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 DUOX2Q9NRD8 1548 aa35.3■■■■□ 3.24
LRRK1-206ENST00000527698 ESF1Q9H501 851 aaKnown RBP35.28■■■■□ 3.24
LRRK1-206ENST00000527698 NCOA1Q15788 1441 aa35.28■■■■□ 3.24
LRRK1-206ENST00000527698 CNTLNQ9NXG0 1405 aa35.28■■■■□ 3.24
LRRK1-206ENST00000527698 PPP6R1Q9UPN7 881 aa35.27■■■■□ 3.24
LRRK1-206ENST00000527698 ROCK1Q13464 1354 aa35.26■■■■□ 3.24
LRRK1-206ENST00000527698 KIF15Q9NS87 1388 aa35.26■■■■□ 3.24
LRRK1-206ENST00000527698 CHIC2Q9UKJ5 165 aa35.26■■■■□ 3.24
LRRK1-206ENST00000527698 EIF2AK4Q9P2K8 1649 aaKnown RBP35.24■■■■□ 3.23
LRRK1-206ENST00000527698 RRP7BPQ9NSQ0 103 aa35.23■■■■□ 3.23
LRRK1-206ENST00000527698 MROH2AA6NES4 1674 aa35.22■■■■□ 3.23
LRRK1-206ENST00000527698 ERBINQ96RT1 1412 aa35.21■■■■□ 3.23
LRRK1-206ENST00000527698 PTPRKQ15262 1439 aa35.18■■■■□ 3.22
LRRK1-206ENST00000527698 KIF3BO15066 747 aa35.18■■■■□ 3.22
LRRK1-206ENST00000527698 PTPRTO14522 1441 aa35.17■■■■□ 3.22
LRRK1-206ENST00000527698 ITGAEP38570 1179 aa35.17■■■■□ 3.22
LRRK1-206ENST00000527698 FAM135AQ9P2D6 1515 aa35.13■■■■□ 3.21
LRRK1-206ENST00000527698 NPATQ14207 1427 aa35.13■■■■□ 3.21
LRRK1-206ENST00000527698 GGT6Q6P531 493 aa35.12■■■■□ 3.21
LRRK1-206ENST00000527698 RNF17Q9BXT8 1623 aaKnown RBP35.1■■■■□ 3.21
LRRK1-206ENST00000527698 ANKRD50Q9ULJ7 1429 aa35.07■■■■□ 3.21
LRRK1-206ENST00000527698 ZMYM3Q14202 1370 aa35.05■■■■□ 3.2
LRRK1-206ENST00000527698 CLTCQ00610 1675 aaKnown RBP35.03■■■■□ 3.2
LRRK1-206ENST00000527698 WASHC2CQ9Y4E1 1318 aa34.99■■■■□ 3.19
LRRK1-206ENST00000527698 DEPDC5O75140 1603 aa34.99■■■■□ 3.19
LRRK1-206ENST00000527698 CAMSAP1Q5T5Y3 1602 aa34.98■■■■□ 3.19
LRRK1-206ENST00000527698 KDM5DQ9BY66 1539 aa34.97■■■■□ 3.19
LRRK1-206ENST00000527698 LTBP4Q8N2S1 1624 aa34.97■■■■□ 3.19
LRRK1-206ENST00000527698 ZNF142P52746 1687 aaPredicted RBP34.97■■■■□ 3.19
LRRK1-206ENST00000527698 ZC3H13Q5T200 1668 aaKnown RBP34.97■■■■□ 3.19
LRRK1-206ENST00000527698 KANK1Q14678 1352 aa34.97■■■■□ 3.19
LRRK1-206ENST00000527698 PRDM15P57071 1507 aaPredicted RBP34.95■■■■□ 3.19
LRRK1-206ENST00000527698 IQSEC2Q5JU85 1478 aa34.94■■■■□ 3.18
LRRK1-206ENST00000527698 MYO3AQ8NEV4 1616 aa34.93■■■■□ 3.18
LRRK1-206ENST00000527698 HFM1A2PYH4 1435 aa34.93■■■■□ 3.18
LRRK1-206ENST00000527698 GCC2Q8IWJ2 1684 aa34.92■■■■□ 3.18
LRRK1-206ENST00000527698 MROH1Q8NDA8 1641 aa34.91■■■■□ 3.18
LRRK1-206ENST00000527698 NAIPQ13075 1403 aa34.89■■■■□ 3.18
LRRK1-206ENST00000527698 ACIN1Q9UKV3 1341 aaKnown RBP34.88■■■■□ 3.17
LRRK1-206ENST00000527698 PLA2R1Q13018 1463 aa34.87■■■■□ 3.17
LRRK1-206ENST00000527698 CEP170BQ9Y4F5 1589 aaPredicted RBP34.87■■■■□ 3.17
LRRK1-206ENST00000527698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.85■■■■□ 3.17
LRRK1-206ENST00000527698 ABCC3O15438 1527 aa34.85■■■■□ 3.17
LRRK1-206ENST00000527698 UNC13BO14795 1591 aa34.83■■■■□ 3.17
LRRK1-206ENST00000527698 VWDEQ8N2E2 1590 aa34.83■■■■□ 3.17
LRRK1-206ENST00000527698 LMTK2Q8IWU2 1503 aa34.8■■■■□ 3.16
LRRK1-206ENST00000527698 CEP152O94986 1710 aa34.79■■■■□ 3.16
LRRK1-206ENST00000527698 PKD2Q13563 968 aa34.79■■■■□ 3.16
LRRK1-206ENST00000527698 NCKAP5LQ9HCH0 1330 aa34.77■■■■□ 3.16
LRRK1-206ENST00000527698 PZPP20742 1482 aa34.77■■■■□ 3.16
LRRK1-206ENST00000527698 ARHGAP31Q2M1Z3 1444 aa34.76■■■■□ 3.16
LRRK1-206ENST00000527698 NUP155O75694 1391 aa34.72■■■■□ 3.15
LRRK1-206ENST00000527698 A2ML1A8K2U0 1454 aa34.71■■■■□ 3.15
LRRK1-206ENST00000527698 IQGAP3Q86VI3 1631 aa34.71■■■■□ 3.15
LRRK1-206ENST00000527698 SETD5Q9C0A6 1442 aa34.7■■■■□ 3.15
LRRK1-206ENST00000527698 TET3O43151 1660 aa34.69■■■■□ 3.14
LRRK1-206ENST00000527698 DISP3Q9P2K9 1392 aa34.67■■■■□ 3.14
LRRK1-206ENST00000527698 ZNF335Q9H4Z2 1342 aaPredicted RBP34.66■■■■□ 3.14
LRRK1-206ENST00000527698 RPRD2Q5VT52 1461 aaKnown RBP34.65■■■■□ 3.14
LRRK1-206ENST00000527698 EFCAB6Q5THR3 1501 aa34.65■■■■□ 3.14
LRRK1-206ENST00000527698 TRIM26Q12899 539 aaPredicted RBP34.63■■■■□ 3.13
LRRK1-206ENST00000527698 HRCP23327 699 aa34.62■■■■□ 3.13
LRRK1-206ENST00000527698 POLR1AO95602 1720 aaPredicted RBP34.61■■■■□ 3.13
LRRK1-206ENST00000527698 CFAP65Q6ZU64 1925 aaKnown RBP34.61■■■■□ 3.13
LRRK1-206ENST00000527698 TRIM52Q96A61 297 aa34.6■■■■□ 3.13
LRRK1-206ENST00000527698 SPATA31D1Q6ZQQ2 1576 aa34.59■■■■□ 3.13
LRRK1-206ENST00000527698 TNRQ92752 1358 aa34.59■■■■□ 3.13
LRRK1-206ENST00000527698 FBXO31Q5XUX0 539 aaPredicted RBP34.58■■■■□ 3.13
LRRK1-206ENST00000527698 ERVK-7P63135 1459 aa34.57■■■■□ 3.12
LRRK1-206ENST00000527698 NLRP1Q9C000 1473 aa34.53■■■■□ 3.12
LRRK1-206ENST00000527698 NEURL4Q96JN8 1562 aa34.53■■■■□ 3.12
LRRK1-206ENST00000527698 RAB3GAP2Q9H2M9 1393 aa34.52■■■■□ 3.12
LRRK1-206ENST00000527698 E9PCH4 1651 aa34.5■■■■□ 3.11
LRRK1-206ENST00000527698 ILDR2Q71H61 639 aa34.5■■■■□ 3.11
LRRK1-206ENST00000527698 UBAP1LF5GYI3 381 aa34.49■■■■□ 3.11
LRRK1-206ENST00000527698 SLC4A1APQ9BWU0 796 aaKnown RBP34.47■■■■□ 3.11
LRRK1-206ENST00000527698 NOS1P29475 1434 aa34.47■■■■□ 3.11
LRRK1-206ENST00000527698 SLC52A1Q9NWF4 448 aa34.45■■■■□ 3.11
LRRK1-206ENST00000527698 CPS1P31327 1500 aa34.45■■■■□ 3.1
LRRK1-206ENST00000527698 UGGT1Q9NYU2 1555 aa34.43■■■■□ 3.1
LRRK1-206ENST00000527698 THEMISQ8N1K5 641 aaPredicted RBP34.42■■■■□ 3.1
LRRK1-206ENST00000527698 SOCS7O14512 581 aa34.41■■■■□ 3.1
LRRK1-206ENST00000527698 ANKLE2Q86XL3 938 aa34.4■■■■□ 3.1
LRRK1-206ENST00000527698 MED14O60244 1454 aa34.39■■■■□ 3.1
LRRK1-206ENST00000527698 MPHOSPH9Q99550 1183 aa34.38■■■■□ 3.09
LRRK1-206ENST00000527698 KDM5AP29375 1690 aaKnown RBP34.37■■■■□ 3.09
LRRK1-206ENST00000527698 SYNMO15061 1565 aa34.36■■■■□ 3.09
LRRK1-206ENST00000527698 SPHKAPQ2M3C7 1700 aa34.35■■■■□ 3.09
LRRK1-206ENST00000527698 NPHP4O75161 1426 aaPredicted RBP34.31■■■■□ 3.08
LRRK1-206ENST00000527698 IDI1Q13907 227 aa34.3■■■■□ 3.08
LRRK1-206ENST00000527698 IQGAP1P46940 1657 aa34.3■■■■□ 3.08
LRRK1-206ENST00000527698 STAG3Q9UJ98 1225 aa34.29■■■■□ 3.08
LRRK1-206ENST00000527698 PIK3C2BO00750 1634 aa34.29■■■■□ 3.08
LRRK1-206ENST00000527698 UBR1Q8IWV7 1749 aa34.27■■■■□ 3.08
LRRK1-206ENST00000527698 TOM1O60784 492 aa34.26■■■■□ 3.08
LRRK1-206ENST00000527698 TRPM2O94759 1503 aa34.25■■■■□ 3.07
LRRK1-206ENST00000527698 ADGRB3O60242 1522 aa34.2■■■■□ 3.06
LRRK1-206ENST00000527698 HDGFP51858 240 aaKnown RBP34.16■■■■□ 3.06
LRRK1-206ENST00000527698 SCAF1Q9H7N4 1312 aaKnown RBP34.15■■■■□ 3.06
LRRK1-206ENST00000527698 PIP4K2BP78356 416 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms