RNA–Protein interactions for RNA: ENST00000527528.1

AP003066.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003066.1, Length 1,647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003066.1-201ENST00000527528 CFDP1Q9UEE9 299 aaPredicted RBP11.89□□□□□ -0.51
AP003066.1-201ENST00000527528 GPATCH8Q9UKJ3 1502 aaKnown RBP11.89□□□□□ -0.51
AP003066.1-201ENST00000527528 STRCQ7RTU9 1775 aa11.89□□□□□ -0.51
AP003066.1-201ENST00000527528 SAMD9LQ8IVG5 1584 aa11.89□□□□□ -0.51
AP003066.1-201ENST00000527528 CCNB3Q8WWL7 1395 aa11.89□□□□□ -0.51
AP003066.1-201ENST00000527528 SYCP2Q9BX26 1530 aa11.89□□□□□ -0.51
AP003066.1-201ENST00000527528 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
AP003066.1-201ENST00000527528 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
AP003066.1-201ENST00000527528 NPATQ14207 1427 aa11.87□□□□□ -0.51
AP003066.1-201ENST00000527528 MTUS2Q5JR59 1369 aa11.87□□□□□ -0.51
AP003066.1-201ENST00000527528 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
AP003066.1-201ENST00000527528 ATP7AQ04656 1500 aa11.86□□□□□ -0.51
AP003066.1-201ENST00000527528 ZMYM3Q14202 1370 aa11.86□□□□□ -0.51
AP003066.1-201ENST00000527528 NCOA1Q15788 1441 aa11.85□□□□□ -0.51
AP003066.1-201ENST00000527528 MROH2AA6NES4 1674 aa11.85□□□□□ -0.51
AP003066.1-201ENST00000527528 A2MP01023 1474 aa11.84□□□□□ -0.51
AP003066.1-201ENST00000527528 SUPT6HQ7KZ85 1726 aaKnown RBP11.84□□□□□ -0.51
AP003066.1-201ENST00000527528 GGT6Q6P531 493 aa11.82□□□□□ -0.52
AP003066.1-201ENST00000527528 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
AP003066.1-201ENST00000527528 INO80Q9ULG1 1556 aaPredicted RBP11.82□□□□□ -0.52
AP003066.1-201ENST00000527528 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
AP003066.1-201ENST00000527528 IQSEC2Q5JU85 1478 aa11.81□□□□□ -0.52
AP003066.1-201ENST00000527528 PKD2Q13563 968 aa11.81□□□□□ -0.52
AP003066.1-201ENST00000527528 PLXNC1O60486 1568 aa11.81□□□□□ -0.52
AP003066.1-201ENST00000527528 CLTCQ00610 1675 aaKnown RBP11.8□□□□□ -0.52
AP003066.1-201ENST00000527528 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
AP003066.1-201ENST00000527528 LTBP4Q8N2S1 1624 aa11.8□□□□□ -0.52
AP003066.1-201ENST00000527528 EHBP1L1Q8N3D4 1523 aa11.79□□□□□ -0.52
AP003066.1-201ENST00000527528 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
AP003066.1-201ENST00000527528 ADGBQ8N7X0 1667 aa11.79□□□□□ -0.52
AP003066.1-201ENST00000527528 PTPRKQ15262 1439 aa11.79□□□□□ -0.52
AP003066.1-201ENST00000527528 PLA2R1Q13018 1463 aa11.78□□□□□ -0.52
AP003066.1-201ENST00000527528 ZNF644Q9H582 1327 aaPredicted RBP11.78□□□□□ -0.52
AP003066.1-201ENST00000527528 MYO3AQ8NEV4 1616 aa11.78□□□□□ -0.52
AP003066.1-201ENST00000527528 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.52
AP003066.1-201ENST00000527528 CEP162Q5TB80 1403 aa11.77□□□□□ -0.52
AP003066.1-201ENST00000527528 TIAM1Q13009 1591 aa11.77□□□□□ -0.53
AP003066.1-201ENST00000527528 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
AP003066.1-201ENST00000527528 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
AP003066.1-201ENST00000527528 RSPH4AQ5TD94 716 aa11.76□□□□□ -0.53
AP003066.1-201ENST00000527528 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
AP003066.1-201ENST00000527528 ZNF142P52746 1687 aaPredicted RBP11.76□□□□□ -0.53
AP003066.1-201ENST00000527528 DHX29Q7Z478 1369 aaKnown RBP11.76□□□□□ -0.53
AP003066.1-201ENST00000527528 ZNF335Q9H4Z2 1342 aaPredicted RBP11.75□□□□□ -0.53
AP003066.1-201ENST00000527528 TCOF1Q13428 1488 aaKnown RBP11.74□□□□□ -0.53
AP003066.1-201ENST00000527528 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
AP003066.1-201ENST00000527528 UBAP1LF5GYI3 381 aa11.74□□□□□ -0.53
AP003066.1-201ENST00000527528 KIF3BO15066 747 aa11.74□□□□□ -0.53
AP003066.1-201ENST00000527528 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
AP003066.1-201ENST00000527528 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
AP003066.1-201ENST00000527528 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
AP003066.1-201ENST00000527528 CCDC141Q6ZP82 1450 aa11.73□□□□□ -0.53
AP003066.1-201ENST00000527528 SPATA31D1Q6ZQQ2 1576 aa11.73□□□□□ -0.53
AP003066.1-201ENST00000527528 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
AP003066.1-201ENST00000527528 FAM135AQ9P2D6 1515 aa11.72□□□□□ -0.53
AP003066.1-201ENST00000527528 HAX1O00165 279 aa11.72□□□□□ -0.53
AP003066.1-201ENST00000527528 WASHC2CQ9Y4E1 1318 aa11.72□□□□□ -0.53
AP003066.1-201ENST00000527528 SOCS7O14512 581 aa11.71□□□□□ -0.53
AP003066.1-201ENST00000527528 TSPY4P0CV99 314 aa11.71□□□□□ -0.53
AP003066.1-201ENST00000527528 TSPY10P0CW01 314 aa11.71□□□□□ -0.53
AP003066.1-201ENST00000527528 ILDR2Q71H61 639 aa11.71□□□□□ -0.53
AP003066.1-201ENST00000527528 TNRQ92752 1358 aa11.71□□□□□ -0.53
AP003066.1-201ENST00000527528 CAMSAP2Q08AD1 1489 aa11.71□□□□□ -0.53
AP003066.1-201ENST00000527528 NCOA2Q15596 1464 aa11.71□□□□□ -0.53
AP003066.1-201ENST00000527528 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
AP003066.1-201ENST00000527528 PZPP20742 1482 aa11.69□□□□□ -0.54
AP003066.1-201ENST00000527528 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
AP003066.1-201ENST00000527528 FBXO31Q5XUX0 539 aaPredicted RBP11.68□□□□□ -0.54
AP003066.1-201ENST00000527528 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
AP003066.1-201ENST00000527528 THEMISQ8N1K5 641 aaPredicted RBP11.68□□□□□ -0.54
AP003066.1-201ENST00000527528 ARHGEF5Q12774 1597 aa11.67□□□□□ -0.54
AP003066.1-201ENST00000527528 CPS1P31327 1500 aa11.66□□□□□ -0.54
AP003066.1-201ENST00000527528 TOM1O60784 492 aa11.66□□□□□ -0.54
AP003066.1-201ENST00000527528 NLRP1Q9C000 1473 aa11.66□□□□□ -0.54
AP003066.1-201ENST00000527528 MIA2Q96PC5 1412 aa11.65□□□□□ -0.54
AP003066.1-201ENST00000527528 POLR1AO95602 1720 aaPredicted RBP11.65□□□□□ -0.55
AP003066.1-201ENST00000527528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.64□□□□□ -0.55
AP003066.1-201ENST00000527528 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
AP003066.1-201ENST00000527528 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
AP003066.1-201ENST00000527528 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
AP003066.1-201ENST00000527528 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
AP003066.1-201ENST00000527528 UGGT1Q9NYU2 1555 aa11.63□□□□□ -0.55
AP003066.1-201ENST00000527528 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
AP003066.1-201ENST00000527528 PIP4K2BP78356 416 aa11.63□□□□□ -0.55
AP003066.1-201ENST00000527528 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
AP003066.1-201ENST00000527528 NPHP4O75161 1426 aaPredicted RBP11.62□□□□□ -0.55
AP003066.1-201ENST00000527528 ZC3H13Q5T200 1668 aaKnown RBP11.6□□□□□ -0.55
AP003066.1-201ENST00000527528 MAST1Q9Y2H9 1570 aa11.6□□□□□ -0.55
AP003066.1-201ENST00000527528 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
AP003066.1-201ENST00000527528 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
AP003066.1-201ENST00000527528 ABCC3O15438 1527 aa11.6□□□□□ -0.55
AP003066.1-201ENST00000527528 MED14O60244 1454 aa11.6□□□□□ -0.55
AP003066.1-201ENST00000527528 HSPA1LP34931 641 aa11.6□□□□□ -0.55
AP003066.1-201ENST00000527528 EIF2AK4Q9P2K8 1649 aaKnown RBP11.59□□□□□ -0.55
AP003066.1-201ENST00000527528 PITPNM1O00562 1244 aa11.59□□□□□ -0.55
AP003066.1-201ENST00000527528 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
AP003066.1-201ENST00000527528 MAP3K1Q13233 1512 aa11.58□□□□□ -0.55
AP003066.1-201ENST00000527528 MYOM3Q5VTT5 1437 aa11.58□□□□□ -0.56
AP003066.1-201ENST00000527528 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.56
AP003066.1-201ENST00000527528 ERVK-7P63135 1459 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms