RNA–Protein interactions for RNA: ENST00000527224.1

PACS1-205, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 3,024 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-205ENST00000527224 DNMBPQ6XZF7 1577 aa23.87■■□□□ 1.41
PACS1-205ENST00000527224 PRDM10Q9NQV6 1147 aa23.87■■□□□ 1.41
PACS1-205ENST00000527224 MYOM3Q5VTT5 1437 aa23.87■■□□□ 1.41
PACS1-205ENST00000527224 KIF15Q9NS87 1388 aa23.86■■□□□ 1.41
PACS1-205ENST00000527224 CENPJQ9HC77 1338 aaPredicted RBP23.84■■□□□ 1.41
PACS1-205ENST00000527224 TBC1D2Q9BYX2 928 aa23.83■■□□□ 1.41
PACS1-205ENST00000527224 TEX14Q8IWB6 1497 aa23.83■■□□□ 1.4
PACS1-205ENST00000527224 POLR1AO95602 1720 aaPredicted RBP23.81■■□□□ 1.4
PACS1-205ENST00000527224 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
PACS1-205ENST00000527224 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
PACS1-205ENST00000527224 RIPK4P57078 832 aa23.8■■□□□ 1.4
PACS1-205ENST00000527224 RALBP1Q15311 655 aa23.78■■□□□ 1.4
PACS1-205ENST00000527224 SLC4A1APQ9BWU0 796 aaKnown RBP23.78■■□□□ 1.4
PACS1-205ENST00000527224 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
PACS1-205ENST00000527224 MIA2Q96PC5 1412 aa23.78■■□□□ 1.4
PACS1-205ENST00000527224 RPRD2Q5VT52 1461 aaKnown RBP23.78■■□□□ 1.4
PACS1-205ENST00000527224 IGHDP01880 384 aa23.78■■□□□ 1.4
PACS1-205ENST00000527224 NLRP13Q86W25 1043 aa23.78■■□□□ 1.4
PACS1-205ENST00000527224 FYCO1Q9BQS8 1478 aa23.77■■□□□ 1.4
PACS1-205ENST00000527224 HECW1Q76N89 1606 aa23.76■■□□□ 1.39
PACS1-205ENST00000527224 CC2D1BQ5T0F9 858 aaKnown RBP23.76■■□□□ 1.39
PACS1-205ENST00000527224 GAS2L3Q86XJ1 694 aa23.76■■□□□ 1.39
PACS1-205ENST00000527224 CASKIN1Q8WXD9 1431 aa23.75■■□□□ 1.39
PACS1-205ENST00000527224 BCL11BQ9C0K0 894 aaPredicted RBP23.74■■□□□ 1.39
PACS1-205ENST00000527224 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
PACS1-205ENST00000527224 R3HCC1Q9Y3T6 440 aaKnown RBP23.72■■□□□ 1.39
PACS1-205ENST00000527224 CARD11Q9BXL7 1154 aa23.7■■□□□ 1.39
PACS1-205ENST00000527224 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
PACS1-205ENST00000527224 ARID3CA6NKF2 412 aa23.68■■□□□ 1.38
PACS1-205ENST00000527224 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
PACS1-205ENST00000527224 BBXQ8WY36 941 aaPredicted RBP23.68■■□□□ 1.38
PACS1-205ENST00000527224 UPF2Q9HAU5 1272 aaKnown RBP23.65■■□□□ 1.38
PACS1-205ENST00000527224 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
PACS1-205ENST00000527224 GAPVD1Q14C86 1478 aa23.65■■□□□ 1.38
PACS1-205ENST00000527224 KDM2AQ9Y2K7 1162 aa23.65■■□□□ 1.38
PACS1-205ENST00000527224 NLRP1Q9C000 1473 aa23.64■■□□□ 1.38
PACS1-205ENST00000527224 DUSP27Q5VZP5 1158 aa23.64■■□□□ 1.38
PACS1-205ENST00000527224 BCAR3O75815 825 aa23.64■■□□□ 1.37
PACS1-205ENST00000527224 TBC1D32Q96NH3 1257 aa23.62■■□□□ 1.37
PACS1-205ENST00000527224 OFD1O75665 1012 aa23.62■■□□□ 1.37
PACS1-205ENST00000527224 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.62■■□□□ 1.37
PACS1-205ENST00000527224 CHMP5Q9NZZ3 219 aa23.61■■□□□ 1.37
PACS1-205ENST00000527224 ADAMTS8Q9UP79 889 aa23.61■■□□□ 1.37
PACS1-205ENST00000527224 MSNP26038 577 aaKnown RBP23.6■■□□□ 1.37
PACS1-205ENST00000527224 UQCRHLA0A096LP55 91 aa23.59■■□□□ 1.37
PACS1-205ENST00000527224 UQCRHP07919 91 aa23.59■■□□□ 1.37
PACS1-205ENST00000527224 ZBTB7CA1YPR0 619 aa23.59■■□□□ 1.37
PACS1-205ENST00000527224 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.37
PACS1-205ENST00000527224 ZSCAN30Q86W11 494 aa23.58■■□□□ 1.37
PACS1-205ENST00000527224 PLEKHH1Q9ULM0 1364 aa23.58■■□□□ 1.37
PACS1-205ENST00000527224 SMAP1Q8IYB5 467 aaPredicted RBP23.57■■□□□ 1.36
PACS1-205ENST00000527224 XPCQ01831 940 aaPredicted RBP23.57■■□□□ 1.36
PACS1-205ENST00000527224 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.56■■□□□ 1.36
PACS1-205ENST00000527224 CUL7Q14999 1698 aa23.56■■□□□ 1.36
PACS1-205ENST00000527224 PARD3Q8TEW0 1356 aa23.56■■□□□ 1.36
PACS1-205ENST00000527224 KDM5CP41229 1560 aa23.55■■□□□ 1.36
PACS1-205ENST00000527224 GCC2Q8IWJ2 1684 aa23.55■■□□□ 1.36
PACS1-205ENST00000527224 CHMP4BQ9H444 224 aaKnown RBP23.54■■□□□ 1.36
PACS1-205ENST00000527224 DDX11L8A8MPP1 907 aa23.54■■□□□ 1.36
PACS1-205ENST00000527224 COG6Q9Y2V7 657 aa23.54■■□□□ 1.36
PACS1-205ENST00000527224 GTF2E1P29083 439 aaPredicted RBP23.54■■□□□ 1.36
PACS1-205ENST00000527224 MFAP1P55081 439 aaKnown RBP23.53■■□□□ 1.36
PACS1-205ENST00000527224 PANK1Q8TE04 598 aa23.52■■□□□ 1.36
PACS1-205ENST00000527224 MAPK8IP3Q9UPT6 1336 aa23.52■■□□□ 1.36
PACS1-205ENST00000527224 NASPP49321 788 aaPredicted RBP23.52■■□□□ 1.36
PACS1-205ENST00000527224 GOLGA2Q08379 1002 aa23.51■■□□□ 1.35
PACS1-205ENST00000527224 MAP7D2Q96T17 732 aa23.51■■□□□ 1.35
PACS1-205ENST00000527224 BLMP54132 1417 aaPredicted RBP23.51■■□□□ 1.35
PACS1-205ENST00000527224 SPINK5Q9NQ38 1064 aaPredicted RBP23.51■■□□□ 1.35
PACS1-205ENST00000527224 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
PACS1-205ENST00000527224 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
PACS1-205ENST00000527224 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
PACS1-205ENST00000527224 FOXD4L1Q9NU39 408 aa23.5■■□□□ 1.35
PACS1-205ENST00000527224 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
PACS1-205ENST00000527224 EFCAB5A4FU69 1503 aa23.49■■□□□ 1.35
PACS1-205ENST00000527224 PDIA4P13667 645 aaKnown RBP23.49■■□□□ 1.35
PACS1-205ENST00000527224 CCDC173Q0VFZ6 552 aa23.49■■□□□ 1.35
PACS1-205ENST00000527224 CCDC146Q8IYE0 955 aa23.48■■□□□ 1.35
PACS1-205ENST00000527224 ZMYM4Q5VZL5 1548 aa23.48■■□□□ 1.35
PACS1-205ENST00000527224 CANXP27824 592 aaKnown RBP23.48■■□□□ 1.35
PACS1-205ENST00000527224 JARID2Q92833 1246 aaPredicted RBP23.47■■□□□ 1.35
PACS1-205ENST00000527224 TNPO1Q92973 898 aaKnown RBP23.47■■□□□ 1.35
PACS1-205ENST00000527224 VIRMAQ69YN4 1812 aaKnown RBP23.46■■□□□ 1.35
PACS1-205ENST00000527224 PER1O15534 1290 aaPredicted RBP23.46■■□□□ 1.35
PACS1-205ENST00000527224 STAC3Q96MF2 364 aa23.46■■□□□ 1.35
PACS1-205ENST00000527224 AMER1Q5JTC6 1135 aaPredicted RBP23.46■■□□□ 1.35
PACS1-205ENST00000527224 NAP1L2Q9ULW6 460 aaPredicted RBP23.46■■□□□ 1.35
PACS1-205ENST00000527224 EIF3AQ14152 1382 aaKnown RBP23.45■■□□□ 1.35
PACS1-205ENST00000527224 CLUAP1Q96AJ1 413 aa23.45■■□□□ 1.34
PACS1-205ENST00000527224 ISY1Q9ULR0 285 aaKnown RBP23.45■■□□□ 1.34
PACS1-205ENST00000527224 ANP32BQ92688 251 aaKnown RBP23.45■■□□□ 1.34
PACS1-205ENST00000527224 SUPT6HQ7KZ85 1726 aaKnown RBP23.45■■□□□ 1.34
PACS1-205ENST00000527224 C22orf23Q9BZE7 217 aa23.44■■□□□ 1.34
PACS1-205ENST00000527224 DMTNQ08495 405 aa23.43■■□□□ 1.34
PACS1-205ENST00000527224 MBD5Q9P267 1494 aa23.43■■□□□ 1.34
PACS1-205ENST00000527224 ZNF692Q9BU19 519 aaPredicted RBP23.43■■□□□ 1.34
PACS1-205ENST00000527224 ZSCAN20P17040 1043 aaPredicted RBP23.42■■□□□ 1.34
PACS1-205ENST00000527224 PKD2Q13563 968 aa23.42■■□□□ 1.34
PACS1-205ENST00000527224 WDR43Q15061 677 aaKnown RBP eCLIP23.42■■□□□ 1.34
PACS1-205ENST00000527224 VGLL3A8MV65 326 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms