RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 RNF17Q9BXT8 1623 aaKnown RBP25.08■■□□□ 1.61
CTSB-213ENST00000527215 SHANK2Q9UPX8 1470 aa25.08■■□□□ 1.6
CTSB-213ENST00000527215 KDM5DQ9BY66 1539 aa25.07■■□□□ 1.6
CTSB-213ENST00000527215 FAM135AQ9P2D6 1515 aa25.07■■□□□ 1.6
CTSB-213ENST00000527215 ABCC5O15440 1437 aa25.07■■□□□ 1.6
CTSB-213ENST00000527215 MYO3AQ8NEV4 1616 aa25.07■■□□□ 1.6
CTSB-213ENST00000527215 DAPK1P53355 1430 aa25.05■■□□□ 1.6
CTSB-213ENST00000527215 ZNF142P52746 1687 aaPredicted RBP25.04■■□□□ 1.6
CTSB-213ENST00000527215 DUOX2Q9NRD8 1548 aa25.04■■□□□ 1.6
CTSB-213ENST00000527215 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
CTSB-213ENST00000527215 CERKQ8TCT0 537 aa25.03■■□□□ 1.6
CTSB-213ENST00000527215 ZC3H13Q5T200 1668 aaKnown RBP25.02■■□□□ 1.6
CTSB-213ENST00000527215 MROH1Q8NDA8 1641 aa25.01■■□□□ 1.59
CTSB-213ENST00000527215 CEP152O94986 1710 aa25■■□□□ 1.59
CTSB-213ENST00000527215 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
CTSB-213ENST00000527215 KIF15Q9NS87 1388 aa24.97■■□□□ 1.59
CTSB-213ENST00000527215 WASHC2CQ9Y4E1 1318 aa24.97■■□□□ 1.59
CTSB-213ENST00000527215 PZPP20742 1482 aa24.96■■□□□ 1.59
CTSB-213ENST00000527215 PTPRTO14522 1441 aa24.95■■□□□ 1.59
CTSB-213ENST00000527215 CAMSAP1Q5T5Y3 1602 aa24.95■■□□□ 1.58
CTSB-213ENST00000527215 ABCC3O15438 1527 aa24.95■■□□□ 1.58
CTSB-213ENST00000527215 CFAP65Q6ZU64 1925 aaKnown RBP24.93■■□□□ 1.58
CTSB-213ENST00000527215 RRP7BPQ9NSQ0 103 aa24.93■■□□□ 1.58
CTSB-213ENST00000527215 ERBINQ96RT1 1412 aa24.93■■□□□ 1.58
CTSB-213ENST00000527215 FAM50AQ14320 339 aaKnown RBP24.92■■□□□ 1.58
CTSB-213ENST00000527215 DEPDC5O75140 1603 aa24.92■■□□□ 1.58
CTSB-213ENST00000527215 NCOA1Q15788 1441 aa24.92■■□□□ 1.58
CTSB-213ENST00000527215 CHIC2Q9UKJ5 165 aa24.91■■□□□ 1.58
CTSB-213ENST00000527215 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
CTSB-213ENST00000527215 ANKRD30AQ9BXX3 1397 aa24.9■■□□□ 1.58
CTSB-213ENST00000527215 FBXO31Q5XUX0 539 aaPredicted RBP24.89■■□□□ 1.58
CTSB-213ENST00000527215 ADGRL2O95490 1459 aa24.89■■□□□ 1.57
CTSB-213ENST00000527215 TNRQ92752 1358 aa24.87■■□□□ 1.57
CTSB-213ENST00000527215 A2ML1A8K2U0 1454 aa24.87■■□□□ 1.57
CTSB-213ENST00000527215 PPARGC1BQ86YN6 1023 aaKnown RBP24.86■■□□□ 1.57
CTSB-213ENST00000527215 SPATA31D1Q6ZQQ2 1576 aa24.84■■□□□ 1.57
CTSB-213ENST00000527215 PLA2R1Q13018 1463 aa24.83■■□□□ 1.56
CTSB-213ENST00000527215 POLR1AO95602 1720 aaPredicted RBP24.82■■□□□ 1.56
CTSB-213ENST00000527215 ERVK-7P63135 1459 aa24.79■■□□□ 1.56
CTSB-213ENST00000527215 NLRP1Q9C000 1473 aa24.78■■□□□ 1.56
CTSB-213ENST00000527215 VWDEQ8N2E2 1590 aa24.77■■□□□ 1.56
CTSB-213ENST00000527215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.77■■□□□ 1.56
CTSB-213ENST00000527215 NCKAP5LQ9HCH0 1330 aa24.77■■□□□ 1.56
CTSB-213ENST00000527215 IQSEC2Q5JU85 1478 aa24.77■■□□□ 1.56
CTSB-213ENST00000527215 PKD2Q13563 968 aa24.76■■□□□ 1.55
CTSB-213ENST00000527215 KANK1Q14678 1352 aa24.75■■□□□ 1.55
CTSB-213ENST00000527215 UGGT1Q9NYU2 1555 aa24.75■■□□□ 1.55
CTSB-213ENST00000527215 LTBP4Q8N2S1 1624 aa24.75■■□□□ 1.55
CTSB-213ENST00000527215 ARHGAP31Q2M1Z3 1444 aa24.74■■□□□ 1.55
CTSB-213ENST00000527215 LMTK2Q8IWU2 1503 aa24.73■■□□□ 1.55
CTSB-213ENST00000527215 ANKRD50Q9ULJ7 1429 aa24.73■■□□□ 1.55
CTSB-213ENST00000527215 UBR1Q8IWV7 1749 aa24.72■■□□□ 1.55
CTSB-213ENST00000527215 NEURL4Q96JN8 1562 aa24.71■■□□□ 1.55
CTSB-213ENST00000527215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.7■■□□□ 1.552e-6■■□□□ 11.9
CTSB-213ENST00000527215 UNC13BO14795 1591 aa24.69■■□□□ 1.54
CTSB-213ENST00000527215 EFCAB6Q5THR3 1501 aa24.69■■□□□ 1.54
CTSB-213ENST00000527215 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
CTSB-213ENST00000527215 ITGAEP38570 1179 aa24.66■■□□□ 1.54
CTSB-213ENST00000527215 TET3O43151 1660 aa24.66■■□□□ 1.54
CTSB-213ENST00000527215 GCC2Q8IWJ2 1684 aa24.66■■□□□ 1.54
CTSB-213ENST00000527215 PIK3C2BO00750 1634 aa24.65■■□□□ 1.54
CTSB-213ENST00000527215 THEMISQ8N1K5 641 aaPredicted RBP24.65■■□□□ 1.54
CTSB-213ENST00000527215 RRBP1Q9P2E9 1410 aaKnown RBP24.63■■□□□ 1.53
CTSB-213ENST00000527215 ZNF335Q9H4Z2 1342 aaPredicted RBP24.62■■□□□ 1.53
CTSB-213ENST00000527215 SYNMO15061 1565 aa24.62■■□□□ 1.53
CTSB-213ENST00000527215 IQGAP1P46940 1657 aa24.6■■□□□ 1.53
CTSB-213ENST00000527215 KDM5AP29375 1690 aaKnown RBP24.59■■□□□ 1.53
CTSB-213ENST00000527215 ANKLE2Q86XL3 938 aa24.59■■□□□ 1.53
CTSB-213ENST00000527215 IQGAP3Q86VI3 1631 aa24.59■■□□□ 1.53
CTSB-213ENST00000527215 MED14O60244 1454 aa24.57■■□□□ 1.52
CTSB-213ENST00000527215 E9PCH4 1651 aa24.56■■□□□ 1.52
CTSB-213ENST00000527215 NOS1P29475 1434 aa24.56■■□□□ 1.52
CTSB-213ENST00000527215 RPRD2Q5VT52 1461 aaKnown RBP24.56■■□□□ 1.52
CTSB-213ENST00000527215 NPHP4O75161 1426 aaPredicted RBP24.55■■□□□ 1.52
CTSB-213ENST00000527215 MYO5BQ9ULV0 1848 aa24.54■■□□□ 1.52
CTSB-213ENST00000527215 SLIT1O75093 1534 aa24.54■■□□□ 1.52
CTSB-213ENST00000527215 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
CTSB-213ENST00000527215 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
CTSB-213ENST00000527215 UBAP1LF5GYI3 381 aa24.5■■□□□ 1.51
CTSB-213ENST00000527215 SCAF11Q99590 1463 aaKnown RBP24.5■■□□□ 1.51
CTSB-213ENST00000527215 ADGRB3O60242 1522 aa24.5■■□□□ 1.51
CTSB-213ENST00000527215 CPS1P31327 1500 aa24.5■■□□□ 1.51
CTSB-213ENST00000527215 IDI1Q13907 227 aa24.49■■□□□ 1.51
CTSB-213ENST00000527215 STRCP1A6NGW2 1772 aa24.47■■□□□ 1.51
CTSB-213ENST00000527215 NUP155O75694 1391 aa24.46■■□□□ 1.51
CTSB-213ENST00000527215 STAG3Q9UJ98 1225 aa24.46■■□□□ 1.51
CTSB-213ENST00000527215 TMEM2Q9UHN6 1383 aa24.44■■□□□ 1.5
CTSB-213ENST00000527215 LTKP29376 864 aa24.43■■□□□ 1.5
CTSB-213ENST00000527215 TXNDC2Q86VQ3 553 aa24.43■■□□□ 1.5
CTSB-213ENST00000527215 SLC52A1Q9NWF4 448 aa24.43■■□□□ 1.5
CTSB-213ENST00000527215 NAIPQ13075 1403 aa24.43■■□□□ 1.5
CTSB-213ENST00000527215 TMEM131LA2VDJ0 1609 aa24.42■■□□□ 1.5
CTSB-213ENST00000527215 SPHKAPQ2M3C7 1700 aa24.41■■□□□ 1.5
CTSB-213ENST00000527215 EID1Q9Y6B2 187 aa24.4■■□□□ 1.5
CTSB-213ENST00000527215 HFM1A2PYH4 1435 aa24.35■■□□□ 1.49
CTSB-213ENST00000527215 TOM1O60784 492 aa24.35■■□□□ 1.49
CTSB-213ENST00000527215 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
CTSB-213ENST00000527215 ZFYVE9O95405 1425 aa24.31■■□□□ 1.48
CTSB-213ENST00000527215 XIRP1Q702N8 1843 aaKnown RBP24.3■■□□□ 1.48
CTSB-213ENST00000527215 RIMS2Q9UQ26 1411 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms