RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 VWDEQ8N2E2 1590 aa26.75■■□□□ 1.87
CHMP4A-203ENST00000527154 MED14O60244 1454 aa26.73■■□□□ 1.87
CHMP4A-203ENST00000527154 PZPP20742 1482 aa26.73■■□□□ 1.87
CHMP4A-203ENST00000527154 DHX29Q7Z478 1369 aaKnown RBP26.72■■□□□ 1.87
CHMP4A-203ENST00000527154 CCNB3Q8WWL7 1395 aa26.72■■□□□ 1.87
CHMP4A-203ENST00000527154 TNRQ92752 1358 aa26.71■■□□□ 1.87
CHMP4A-203ENST00000527154 PIP4K2BP78356 416 aa26.69■■□□□ 1.86
CHMP4A-203ENST00000527154 DEPDC5O75140 1603 aa26.67■■□□□ 1.86
CHMP4A-203ENST00000527154 KDM5DQ9BY66 1539 aa26.66■■□□□ 1.86
CHMP4A-203ENST00000527154 FBXO31Q5XUX0 539 aaPredicted RBP26.66■■□□□ 1.86
CHMP4A-203ENST00000527154 NLRP1Q9C000 1473 aa26.65■■□□□ 1.86
CHMP4A-203ENST00000527154 ZNF644Q9H582 1327 aaPredicted RBP26.65■■□□□ 1.86
CHMP4A-203ENST00000527154 TIAM1Q13009 1591 aa26.64■■□□□ 1.86
CHMP4A-203ENST00000527154 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
CHMP4A-203ENST00000527154 MIA2Q96PC5 1412 aa26.63■■□□□ 1.85
CHMP4A-203ENST00000527154 SCAF1Q9H7N4 1312 aaKnown RBP26.63■■□□□ 1.85
CHMP4A-203ENST00000527154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.62■■□□□ 1.85
CHMP4A-203ENST00000527154 ANKLE2Q86XL3 938 aa26.62■■□□□ 1.85
CHMP4A-203ENST00000527154 NPHP4O75161 1426 aaPredicted RBP26.61■■□□□ 1.85
CHMP4A-203ENST00000527154 THEMISQ8N1K5 641 aaPredicted RBP26.6■■□□□ 1.85
CHMP4A-203ENST00000527154 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.85
CHMP4A-203ENST00000527154 UGGT1Q9NYU2 1555 aa26.58■■□□□ 1.85
CHMP4A-203ENST00000527154 CEP162Q5TB80 1403 aa26.56■■□□□ 1.84
CHMP4A-203ENST00000527154 LRRC7Q96NW7 1537 aa26.56■■□□□ 1.84
CHMP4A-203ENST00000527154 KIF3BO15066 747 aa26.55■■□□□ 1.84
CHMP4A-203ENST00000527154 CCDC141Q6ZP82 1450 aa26.53■■□□□ 1.84
CHMP4A-203ENST00000527154 EHBP1L1Q8N3D4 1523 aa26.53■■□□□ 1.84
CHMP4A-203ENST00000527154 IQGAP1P46940 1657 aa26.53■■□□□ 1.84
CHMP4A-203ENST00000527154 STRCP1A6NGW2 1772 aa26.53■■□□□ 1.84
CHMP4A-203ENST00000527154 SYNMO15061 1565 aa26.52■■□□□ 1.84
CHMP4A-203ENST00000527154 PHF23Q9BUL5 403 aaPredicted RBP26.52■■□□□ 1.84
CHMP4A-203ENST00000527154 RNF17Q9BXT8 1623 aaKnown RBP26.51■■□□□ 1.83
CHMP4A-203ENST00000527154 WASHC2CQ9Y4E1 1318 aa26.51■■□□□ 1.83
CHMP4A-203ENST00000527154 RSPH4AQ5TD94 716 aa26.49■■□□□ 1.83
CHMP4A-203ENST00000527154 RGS17Q9UGC6 210 aaPredicted RBP26.48■■□□□ 1.83
CHMP4A-203ENST00000527154 ZC3H13Q5T200 1668 aaKnown RBP26.44■■□□□ 1.82
CHMP4A-203ENST00000527154 CAMSAP2Q08AD1 1489 aa26.43■■□□□ 1.82
CHMP4A-203ENST00000527154 ARHGEF5Q12774 1597 aa26.42■■□□□ 1.82
CHMP4A-203ENST00000527154 ABCC3O15438 1527 aa26.41■■□□□ 1.82
CHMP4A-203ENST00000527154 ERVK-7P63135 1459 aa26.39■■□□□ 1.82
CHMP4A-203ENST00000527154 ARHGAP23Q9P227 1491 aa26.37■■□□□ 1.81
CHMP4A-203ENST00000527154 NCOA2Q15596 1464 aa26.36■■□□□ 1.81
CHMP4A-203ENST00000527154 MROH1Q8NDA8 1641 aa26.34■■□□□ 1.81
CHMP4A-203ENST00000527154 SCAF11Q99590 1463 aaKnown RBP26.34■■□□□ 1.81
CHMP4A-203ENST00000527154 SLIT1O75093 1534 aa26.34■■□□□ 1.81
CHMP4A-203ENST00000527154 UBR1Q8IWV7 1749 aa26.33■■□□□ 1.81
CHMP4A-203ENST00000527154 MAST1Q9Y2H9 1570 aa26.33■■□□□ 1.8
CHMP4A-203ENST00000527154 FAM135BQ49AJ0 1406 aa26.32■■□□□ 1.8
CHMP4A-203ENST00000527154 XIRP1Q702N8 1843 aaKnown RBP26.31■■□□□ 1.8
CHMP4A-203ENST00000527154 EIF2AK4Q9P2K8 1649 aaKnown RBP26.31■■□□□ 1.8
CHMP4A-203ENST00000527154 LTKP29376 864 aa26.28■■□□□ 1.8
CHMP4A-203ENST00000527154 TSPY4P0CV99 314 aa26.26■■□□□ 1.79
CHMP4A-203ENST00000527154 TSPY10P0CW01 314 aa26.26■■□□□ 1.79
CHMP4A-203ENST00000527154 ARHGAP31Q2M1Z3 1444 aa26.25■■□□□ 1.79
CHMP4A-203ENST00000527154 POTEAQ6S8J7 498 aa26.23■■□□□ 1.79
CHMP4A-203ENST00000527154 SENP3Q9H4L4 574 aaPredicted RBP26.21■■□□□ 1.79
CHMP4A-203ENST00000527154 TXNDC2Q86VQ3 553 aa26.18■■□□□ 1.78
CHMP4A-203ENST00000527154 PRDM15P57071 1507 aaPredicted RBP26.17■■□□□ 1.78
CHMP4A-203ENST00000527154 CEP152O94986 1710 aa26.17■■□□□ 1.78
CHMP4A-203ENST00000527154 MAP3K1Q13233 1512 aa26.16■■□□□ 1.78
CHMP4A-203ENST00000527154 TMEM2Q9UHN6 1383 aa26.15■■□□□ 1.78
CHMP4A-203ENST00000527154 DUOX2Q9NRD8 1548 aa26.14■■□□□ 1.77
CHMP4A-203ENST00000527154 TMEM94Q12767 1356 aa26.13■■□□□ 1.77
CHMP4A-203ENST00000527154 KDM5AP29375 1690 aaKnown RBP26.12■■□□□ 1.77
CHMP4A-203ENST00000527154 TET3O43151 1660 aa26.12■■□□□ 1.77
CHMP4A-203ENST00000527154 EID1Q9Y6B2 187 aa26.1■■□□□ 1.77
CHMP4A-203ENST00000527154 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
CHMP4A-203ENST00000527154 KCNA6P17658 529 aa26.09■■□□□ 1.77
CHMP4A-203ENST00000527154 LRRC9Q6ZRR7 1453 aa26.09■■□□□ 1.77
CHMP4A-203ENST00000527154 PIK3C2BO00750 1634 aa26.08■■□□□ 1.77
CHMP4A-203ENST00000527154 CFAP65Q6ZU64 1925 aaKnown RBP26.07■■□□□ 1.76
CHMP4A-203ENST00000527154 NWD1Q149M9 1564 aa26.06■■□□□ 1.76
CHMP4A-203ENST00000527154 ERBINQ96RT1 1412 aa26.05■■□□□ 1.76
CHMP4A-203ENST00000527154 NKTRP30414 1462 aaKnown RBP26.05■■□□□ 1.76
CHMP4A-203ENST00000527154 MYOM3Q5VTT5 1437 aa26.04■■□□□ 1.76
CHMP4A-203ENST00000527154 EFCAB6Q5THR3 1501 aa26.03■■□□□ 1.76
CHMP4A-203ENST00000527154 LMTK2Q8IWU2 1503 aa26.02■■□□□ 1.76
CHMP4A-203ENST00000527154 KIF15Q9NS87 1388 aa26■■□□□ 1.75
CHMP4A-203ENST00000527154 IDI1Q13907 227 aa25.98■■□□□ 1.75
CHMP4A-203ENST00000527154 JCADQ9P266 1359 aa25.97■■□□□ 1.75
CHMP4A-203ENST00000527154 SETD1AO15047 1707 aaKnown RBP25.97■■□□□ 1.75
CHMP4A-203ENST00000527154 NOS1P29475 1434 aa25.97■■□□□ 1.75
CHMP4A-203ENST00000527154 PROSER2Q86WR7 435 aaPredicted RBP25.95■■□□□ 1.74
CHMP4A-203ENST00000527154 ABCC5O15440 1437 aa25.95■■□□□ 1.74
CHMP4A-203ENST00000527154 SLC26A8Q96RN1 970 aa25.94■■□□□ 1.74
CHMP4A-203ENST00000527154 VPS8Q8N3P4 1428 aa25.93■■□□□ 1.74
CHMP4A-203ENST00000527154 COL16A1Q07092 1604 aaPredicted RBP25.92■■□□□ 1.74
CHMP4A-203ENST00000527154 SLAIN2Q9P270 581 aa25.92■■□□□ 1.74
CHMP4A-203ENST00000527154 ADGRB3O60242 1522 aa25.92■■□□□ 1.74
CHMP4A-203ENST00000527154 MSH6P52701 1360 aa25.92■■□□□ 1.74
CHMP4A-203ENST00000527154 CROCC2H7BZ55 1655 aa25.91■■□□□ 1.74
CHMP4A-203ENST00000527154 KANK4Q5T7N3 995 aaPredicted RBP25.91■■□□□ 1.74
CHMP4A-203ENST00000527154 RBM33Q96EV2 1170 aaKnown RBP25.91■■□□□ 1.74
CHMP4A-203ENST00000527154 PHLPP1O60346 1717 aa25.91■■□□□ 1.74
CHMP4A-203ENST00000527154 FGD6Q6ZV73 1430 aa25.9■■□□□ 1.74
CHMP4A-203ENST00000527154 NCOA3Q9Y6Q9 1424 aa25.88■■□□□ 1.73
CHMP4A-203ENST00000527154 LRP6O75581 1613 aa25.88■■□□□ 1.73
CHMP4A-203ENST00000527154 STAG3Q9UJ98 1225 aa25.88■■□□□ 1.73
CHMP4A-203ENST00000527154 KANK1Q14678 1352 aa25.87■■□□□ 1.73
CHMP4A-203ENST00000527154 UPF1Q92900 1129 aaKnown RBP eCLIP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms