RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 DCAF11Q8TEB1 546 aa24.22■■□□□ 1.47
USH1C-205ENST00000527020 CARD11Q9BXL7 1154 aa24.22■■□□□ 1.47
USH1C-205ENST00000527020 KDM2AQ9Y2K7 1162 aa24.22■■□□□ 1.47
USH1C-205ENST00000527020 ABCC1P33527 1531 aa24.22■■□□□ 1.47
USH1C-205ENST00000527020 TRPM1Q7Z4N2 1603 aa24.22■■□□□ 1.47
USH1C-205ENST00000527020 MAGI2Q86UL8 1455 aa24.22■■□□□ 1.47
USH1C-205ENST00000527020 TSHZ2Q9NRE2 1034 aa24.22■■□□□ 1.47
USH1C-205ENST00000527020 CCDC144AA2RUR9 1427 aa24.2■■□□□ 1.46
USH1C-205ENST00000527020 FAM9BQ8IZU0 186 aa24.19■■□□□ 1.46
USH1C-205ENST00000527020 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
USH1C-205ENST00000527020 ERBINQ96RT1 1412 aa24.17■■□□□ 1.46
USH1C-205ENST00000527020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.15■■□□□ 1.46
USH1C-205ENST00000527020 POLR3GLQ9BT43 218 aa24.15■■□□□ 1.46
USH1C-205ENST00000527020 E9PCH4 1651 aa24.15■■□□□ 1.46
USH1C-205ENST00000527020 ST20-MTHFSA0A0A6YYL1 179 aa24.15■■□□□ 1.46
USH1C-205ENST00000527020 ROCK2O75116 1388 aaKnown RBP24.15■■□□□ 1.46
USH1C-205ENST00000527020 TRAPPC8Q9Y2L5 1435 aa24.14■■□□□ 1.46
USH1C-205ENST00000527020 A2MP01023 1474 aa24.14■■□□□ 1.45
USH1C-205ENST00000527020 EFCAB2Q5VUJ9 269 aa24.14■■□□□ 1.45
USH1C-205ENST00000527020 ATP10AO60312 1499 aa24.13■■□□□ 1.45
USH1C-205ENST00000527020 ZBED9Q6R2W3 1325 aa24.11■■□□□ 1.45
USH1C-205ENST00000527020 ARAP3Q8WWN8 1544 aa24.11■■□□□ 1.45
USH1C-205ENST00000527020 LAMC1P11047 1609 aa24.09■■□□□ 1.45
USH1C-205ENST00000527020 GPRASP1Q5JY77 1395 aa24.07■■□□□ 1.44
USH1C-205ENST00000527020 RGL3Q3MIN7 710 aa24.07■■□□□ 1.44
USH1C-205ENST00000527020 ZFYVE16Q7Z3T8 1539 aa24.06■■□□□ 1.44
USH1C-205ENST00000527020 NBPF1Q3BBV0 1214 aa24.04■■□□□ 1.44
USH1C-205ENST00000527020 PRDM15P57071 1507 aaPredicted RBP24.04■■□□□ 1.44
USH1C-205ENST00000527020 CNGB1Q14028 1251 aaPredicted RBP24.03■■□□□ 1.44
USH1C-205ENST00000527020 EIF2AK4Q9P2K8 1649 aaKnown RBP24.03■■□□□ 1.44
USH1C-205ENST00000527020 RTEL1-TNFRSF6BF6WH68 1400 aa24.03■■□□□ 1.44
USH1C-205ENST00000527020 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
USH1C-205ENST00000527020 WDR7Q9Y4E6 1490 aa24.02■■□□□ 1.44
USH1C-205ENST00000527020 IRX6P78412 446 aaPredicted RBP24.01■■□□□ 1.43
USH1C-205ENST00000527020 DEPDC5O75140 1603 aa24■■□□□ 1.43
USH1C-205ENST00000527020 SPAG9O60271 1321 aaKnown RBP23.99■■□□□ 1.43
USH1C-205ENST00000527020 AFAP1Q8N556 730 aa23.99■■□□□ 1.43
USH1C-205ENST00000527020 RNF17Q9BXT8 1623 aaKnown RBP23.98■■□□□ 1.43
USH1C-205ENST00000527020 INO80Q9ULG1 1556 aaPredicted RBP23.97■■□□□ 1.43
USH1C-205ENST00000527020 COL17A1Q9UMD9 1497 aaPredicted RBP23.95■■□□□ 1.42
USH1C-205ENST00000527020 PNISRQ8TF01 805 aaKnown RBP23.95■■□□□ 1.42
USH1C-205ENST00000527020 SPHKAPQ2M3C7 1700 aa23.95■■□□□ 1.42
USH1C-205ENST00000527020 CEP152O94986 1710 aa23.94■■□□□ 1.42
USH1C-205ENST00000527020 FANCAO15360 1455 aa23.94■■□□□ 1.42
USH1C-205ENST00000527020 TRPM2O94759 1503 aa23.94■■□□□ 1.42
USH1C-205ENST00000527020 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
USH1C-205ENST00000527020 KTN1Q86UP2 1357 aaKnown RBP23.93■■□□□ 1.42
USH1C-205ENST00000527020 TESK2Q96S53 571 aa23.92■■□□□ 1.42
USH1C-205ENST00000527020 ERICH6BQ5W0A0 696 aa23.92■■□□□ 1.42
USH1C-205ENST00000527020 TET3O43151 1660 aa23.91■■□□□ 1.42
USH1C-205ENST00000527020 MADDQ8WXG6 1647 aa23.91■■□□□ 1.42
USH1C-205ENST00000527020 VWDEQ8N2E2 1590 aa23.9■■□□□ 1.42
USH1C-205ENST00000527020 SMG6Q86US8 1419 aaKnown RBP23.9■■□□□ 1.42
USH1C-205ENST00000527020 DISP3Q9P2K9 1392 aa23.9■■□□□ 1.42
USH1C-205ENST00000527020 PTPRTO14522 1441 aa23.9■■□□□ 1.42
USH1C-205ENST00000527020 LRPPRCP42704 1394 aaKnown RBP23.9■■□□□ 1.42
USH1C-205ENST00000527020 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.42
USH1C-205ENST00000527020 CLTCL1P53675 1640 aa23.89■■□□□ 1.42
USH1C-205ENST00000527020 RALBP1Q15311 655 aa23.89■■□□□ 1.42
USH1C-205ENST00000527020 BRD4O60885 1362 aaPredicted RBP23.89■■□□□ 1.41
USH1C-205ENST00000527020 TMC1Q8TDI8 760 aa23.88■■□□□ 1.41
USH1C-205ENST00000527020 PER1O15534 1290 aaPredicted RBP23.86■■□□□ 1.41
USH1C-205ENST00000527020 PARD3Q8TEW0 1356 aa23.86■■□□□ 1.41
USH1C-205ENST00000527020 IQGAP1P46940 1657 aa23.86■■□□□ 1.41
USH1C-205ENST00000527020 ADGRL1O94910 1474 aa23.86■■□□□ 1.41
USH1C-205ENST00000527020 ASXL2Q76L83 1435 aa23.85■■□□□ 1.41
USH1C-205ENST00000527020 MROH1Q8NDA8 1641 aa23.85■■□□□ 1.41
USH1C-205ENST00000527020 SCAPERQ9BY12 1400 aa23.83■■□□□ 1.41
USH1C-205ENST00000527020 PPP4R2Q9NY27 417 aa23.82■■□□□ 1.4
USH1C-205ENST00000527020 NUDCQ9Y266 331 aa23.81■■□□□ 1.4
USH1C-205ENST00000527020 KIDINS220Q9ULH0 1771 aa23.8■■□□□ 1.4
USH1C-205ENST00000527020 RBM19Q9Y4C8 960 aaKnown RBP23.78■■□□□ 1.4
USH1C-205ENST00000527020 KANK1Q14678 1352 aa23.77■■□□□ 1.39
USH1C-205ENST00000527020 SENP3-EIF4A1A0A087X0R7 540 aa23.76■■□□□ 1.39
USH1C-205ENST00000527020 NLRP13Q86W25 1043 aa23.76■■□□□ 1.39
USH1C-205ENST00000527020 NEURL4Q96JN8 1562 aa23.76■■□□□ 1.39
USH1C-205ENST00000527020 RNF123Q5XPI4 1314 aa23.76■■□□□ 1.39
USH1C-205ENST00000527020 KIF3BO15066 747 aa23.76■■□□□ 1.39
USH1C-205ENST00000527020 TMF1P82094 1093 aa23.76■■□□□ 1.39
USH1C-205ENST00000527020 WASHC2CQ9Y4E1 1318 aa23.75■■□□□ 1.39
USH1C-205ENST00000527020 PANK3Q9H999 370 aa23.74■■□□□ 1.39
USH1C-205ENST00000527020 KIAA1210Q9ULL0 1709 aa23.74■■□□□ 1.39
USH1C-205ENST00000527020 STAC3Q96MF2 364 aa23.72■■□□□ 1.39
USH1C-205ENST00000527020 UGGT1Q9NYU2 1555 aa23.71■■□□□ 1.39
USH1C-205ENST00000527020 EFCAB6Q5THR3 1501 aa23.71■■□□□ 1.39
USH1C-205ENST00000527020 SCAF11Q99590 1463 aaKnown RBP23.7■■□□□ 1.39
USH1C-205ENST00000527020 PPRC1Q5VV67 1664 aaKnown RBP23.7■■□□□ 1.39
USH1C-205ENST00000527020 KIF1BO60333 1816 aa23.7■■□□□ 1.38
USH1C-205ENST00000527020 IFT172Q9UG01 1749 aa23.69■■□□□ 1.38
USH1C-205ENST00000527020 CC2D1BQ5T0F9 858 aaKnown RBP23.68■■□□□ 1.38
USH1C-205ENST00000527020 B4GALNT3Q6L9W6 998 aa23.68■■□□□ 1.38
USH1C-205ENST00000527020 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
USH1C-205ENST00000527020 ZNF518AQ6AHZ1 1483 aa23.68■■□□□ 1.38
USH1C-205ENST00000527020 MAP3K4Q9Y6R4 1608 aa23.67■■□□□ 1.38
USH1C-205ENST00000527020 MROH2AA6NES4 1674 aa23.67■■□□□ 1.38
USH1C-205ENST00000527020 LMTK2Q8IWU2 1503 aa23.65■■□□□ 1.38
USH1C-205ENST00000527020 ABCA6Q8N139 1617 aa23.65■■□□□ 1.38
USH1C-205ENST00000527020 MYOM1P52179 1685 aa23.65■■□□□ 1.38
USH1C-205ENST00000527020 SYNMO15061 1565 aa23.65■■□□□ 1.38
USH1C-205ENST00000527020 MYOM2P54296 1465 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms