RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 ZNF142P52746 1687 aaPredicted RBP17.47■□□□□ 0.39
AMBRA1-204ENST00000526545 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
AMBRA1-204ENST00000526545 KDM5DQ9BY66 1539 aa17.46■□□□□ 0.39
AMBRA1-204ENST00000526545 MYOM3Q5VTT5 1437 aa17.46■□□□□ 0.39
AMBRA1-204ENST00000526545 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
AMBRA1-204ENST00000526545 APLP2Q06481 763 aa17.45■□□□□ 0.38
AMBRA1-204ENST00000526545 MAST1Q9Y2H9 1570 aa17.44■□□□□ 0.38
AMBRA1-204ENST00000526545 NCKAP5LQ9HCH0 1330 aa17.44■□□□□ 0.38
AMBRA1-204ENST00000526545 PZPP20742 1482 aa17.44■□□□□ 0.38
AMBRA1-204ENST00000526545 A2ML1A8K2U0 1454 aa17.43■□□□□ 0.38
AMBRA1-204ENST00000526545 LTBP4Q8N2S1 1624 aa17.42■□□□□ 0.38
AMBRA1-204ENST00000526545 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
AMBRA1-204ENST00000526545 TNRQ92752 1358 aa17.41■□□□□ 0.38
AMBRA1-204ENST00000526545 FBXO31Q5XUX0 539 aaPredicted RBP17.41■□□□□ 0.38
AMBRA1-204ENST00000526545 IQSEC2Q5JU85 1478 aa17.41■□□□□ 0.38
AMBRA1-204ENST00000526545 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
AMBRA1-204ENST00000526545 RNF17Q9BXT8 1623 aaKnown RBP17.37■□□□□ 0.37
AMBRA1-204ENST00000526545 EIF2AK4Q9P2K8 1649 aaKnown RBP17.37■□□□□ 0.37
AMBRA1-204ENST00000526545 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
AMBRA1-204ENST00000526545 NLRP1Q9C000 1473 aa17.36■□□□□ 0.37
AMBRA1-204ENST00000526545 DUOX2Q9NRD8 1548 aa17.35■□□□□ 0.37
AMBRA1-204ENST00000526545 ZC3H13Q5T200 1668 aaKnown RBP17.34■□□□□ 0.37
AMBRA1-204ENST00000526545 ZNF335Q9H4Z2 1342 aaPredicted RBP17.34■□□□□ 0.37
AMBRA1-204ENST00000526545 ABCC3O15438 1527 aa17.33■□□□□ 0.37
AMBRA1-204ENST00000526545 SHANK2Q9UPX8 1470 aa17.33■□□□□ 0.37
AMBRA1-204ENST00000526545 ANKLE2Q86XL3 938 aa17.33■□□□□ 0.36
AMBRA1-204ENST00000526545 ABCC5O15440 1437 aa17.32■□□□□ 0.36
AMBRA1-204ENST00000526545 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
AMBRA1-204ENST00000526545 KIF15Q9NS87 1388 aa17.31■□□□□ 0.36
AMBRA1-204ENST00000526545 FGD6Q6ZV73 1430 aa17.3■□□□□ 0.36
AMBRA1-204ENST00000526545 ERBINQ96RT1 1412 aa17.3■□□□□ 0.36
AMBRA1-204ENST00000526545 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
AMBRA1-204ENST00000526545 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
AMBRA1-204ENST00000526545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.29■□□□□ 0.36
AMBRA1-204ENST00000526545 DAPK1P53355 1430 aa17.29■□□□□ 0.36
AMBRA1-204ENST00000526545 MROH1Q8NDA8 1641 aa17.29■□□□□ 0.36
AMBRA1-204ENST00000526545 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
AMBRA1-204ENST00000526545 POLR1AO95602 1720 aaPredicted RBP17.27■□□□□ 0.36
AMBRA1-204ENST00000526545 CROCC2H7BZ55 1655 aa17.27■□□□□ 0.36
AMBRA1-204ENST00000526545 ERVK-7P63135 1459 aa17.26■□□□□ 0.35
AMBRA1-204ENST00000526545 ARHGAP31Q2M1Z3 1444 aa17.26■□□□□ 0.35
AMBRA1-204ENST00000526545 NEURL4Q96JN8 1562 aa17.26■□□□□ 0.35
AMBRA1-204ENST00000526545 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
AMBRA1-204ENST00000526545 MED14O60244 1454 aa17.25■□□□□ 0.35
AMBRA1-204ENST00000526545 PRDM15P57071 1507 aaPredicted RBP17.25■□□□□ 0.35
AMBRA1-204ENST00000526545 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
AMBRA1-204ENST00000526545 UBAP1LF5GYI3 381 aa17.24■□□□□ 0.35
AMBRA1-204ENST00000526545 KANK1Q14678 1352 aa17.24■□□□□ 0.35
AMBRA1-204ENST00000526545 CPS1P31327 1500 aa17.23■□□□□ 0.35
AMBRA1-204ENST00000526545 NPHP4O75161 1426 aaPredicted RBP17.22■□□□□ 0.35
AMBRA1-204ENST00000526545 CEP152O94986 1710 aa17.21■□□□□ 0.35
AMBRA1-204ENST00000526545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
AMBRA1-204ENST00000526545 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
AMBRA1-204ENST00000526545 TOM1O60784 492 aa17.17■□□□□ 0.34
AMBRA1-204ENST00000526545 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
AMBRA1-204ENST00000526545 VWDEQ8N2E2 1590 aa17.17■□□□□ 0.34
AMBRA1-204ENST00000526545 ADGRL2O95490 1459 aa17.17■□□□□ 0.34
AMBRA1-204ENST00000526545 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
AMBRA1-204ENST00000526545 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
AMBRA1-204ENST00000526545 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
AMBRA1-204ENST00000526545 UBR1Q8IWV7 1749 aa17.16■□□□□ 0.34
AMBRA1-204ENST00000526545 SCAF11Q99590 1463 aaKnown RBP17.14■□□□□ 0.33
AMBRA1-204ENST00000526545 TXNDC2Q86VQ3 553 aa17.14■□□□□ 0.33
AMBRA1-204ENST00000526545 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
AMBRA1-204ENST00000526545 SLIT1O75093 1534 aa17.14■□□□□ 0.33
AMBRA1-204ENST00000526545 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
AMBRA1-204ENST00000526545 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
AMBRA1-204ENST00000526545 LTKP29376 864 aa17.12■□□□□ 0.33
AMBRA1-204ENST00000526545 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
AMBRA1-204ENST00000526545 ANKRD50Q9ULJ7 1429 aa17.11■□□□□ 0.33
AMBRA1-204ENST00000526545 IDI1Q13907 227 aa17.1■□□□□ 0.33
AMBRA1-204ENST00000526545 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
AMBRA1-204ENST00000526545 SLC52A1Q9NWF4 448 aa17.09■□□□□ 0.33
AMBRA1-204ENST00000526545 TMEM2Q9UHN6 1383 aa17.09■□□□□ 0.33
AMBRA1-204ENST00000526545 PIK3C2BO00750 1634 aa17.08■□□□□ 0.32
AMBRA1-204ENST00000526545 EFCAB6Q5THR3 1501 aa17.08■□□□□ 0.32
AMBRA1-204ENST00000526545 NOS1P29475 1434 aa17.08■□□□□ 0.32
AMBRA1-204ENST00000526545 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
AMBRA1-204ENST00000526545 PIP4K2BP78356 416 aa17.08■□□□□ 0.32
AMBRA1-204ENST00000526545 RPRD2Q5VT52 1461 aaKnown RBP17.07■□□□□ 0.32
AMBRA1-204ENST00000526545 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
AMBRA1-204ENST00000526545 SYNMO15061 1565 aa17.06■□□□□ 0.32
AMBRA1-204ENST00000526545 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
AMBRA1-204ENST00000526545 HSPA1LP34931 641 aa17.04■□□□□ 0.32
AMBRA1-204ENST00000526545 ILDR2Q71H61 639 aa17.04■□□□□ 0.32
AMBRA1-204ENST00000526545 STRCP1A6NGW2 1772 aa17.03■□□□□ 0.32
AMBRA1-204ENST00000526545 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
AMBRA1-204ENST00000526545 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
AMBRA1-204ENST00000526545 TET3O43151 1660 aa17■□□□□ 0.31
AMBRA1-204ENST00000526545 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
AMBRA1-204ENST00000526545 SOCS7O14512 581 aa16.99■□□□□ 0.31
AMBRA1-204ENST00000526545 UNC13BO14795 1591 aa16.98■□□□□ 0.31
AMBRA1-204ENST00000526545 KCNA6P17658 529 aa16.98■□□□□ 0.31
AMBRA1-204ENST00000526545 SLC26A8Q96RN1 970 aa16.96■□□□□ 0.31
AMBRA1-204ENST00000526545 GCC2Q8IWJ2 1684 aa16.96■□□□□ 0.31
AMBRA1-204ENST00000526545 ITGAEP38570 1179 aa16.94■□□□□ 0.3
AMBRA1-204ENST00000526545 BCANQ96GW7 911 aa16.94■□□□□ 0.3
AMBRA1-204ENST00000526545 NUP155O75694 1391 aa16.93■□□□□ 0.3
AMBRA1-204ENST00000526545 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.93■□□□□ 0.3
AMBRA1-204ENST00000526545 ZFYVE9O95405 1425 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms