RNA–Protein interactions for RNA: ENST00000526493.1

UBASH3B-204, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 3

Gene UBASH3B, Length 1,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-204ENST00000526493 NUP155O75694 1391 aa19.01■□□□□ 0.63
UBASH3B-204ENST00000526493 FRMPD1Q5SYB0 1578 aa19.01■□□□□ 0.63
UBASH3B-204ENST00000526493 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
UBASH3B-204ENST00000526493 ABCA6Q8N139 1617 aa19■□□□□ 0.63
UBASH3B-204ENST00000526493 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
UBASH3B-204ENST00000526493 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
UBASH3B-204ENST00000526493 ANKRD30BQ9BXX2 1392 aa18.98■□□□□ 0.63
UBASH3B-204ENST00000526493 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
UBASH3B-204ENST00000526493 TIMELESSQ9UNS1 1208 aa18.96■□□□□ 0.63
UBASH3B-204ENST00000526493 DHX29Q7Z478 1369 aaKnown RBP18.95■□□□□ 0.62
UBASH3B-204ENST00000526493 RAPGEF3O95398 923 aa18.95■□□□□ 0.62
UBASH3B-204ENST00000526493 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
UBASH3B-204ENST00000526493 BCORL1Q5H9F3 1711 aa18.94■□□□□ 0.62
UBASH3B-204ENST00000526493 DIP2CQ9Y2E4 1556 aa18.94■□□□□ 0.62
UBASH3B-204ENST00000526493 PKD2Q13563 968 aa18.94■□□□□ 0.62
UBASH3B-204ENST00000526493 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
UBASH3B-204ENST00000526493 A2MP01023 1474 aa18.93■□□□□ 0.62
UBASH3B-204ENST00000526493 MROH1Q8NDA8 1641 aa18.92■□□□□ 0.62
UBASH3B-204ENST00000526493 RNF17Q9BXT8 1623 aaKnown RBP18.92■□□□□ 0.62
UBASH3B-204ENST00000526493 VWDEQ8N2E2 1590 aa18.91■□□□□ 0.62
UBASH3B-204ENST00000526493 RPRD2Q5VT52 1461 aaKnown RBP18.9■□□□□ 0.62
UBASH3B-204ENST00000526493 ADRA2BP18089 450 aa18.9■□□□□ 0.62
UBASH3B-204ENST00000526493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBASH3B-204ENST00000526493 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
UBASH3B-204ENST00000526493 TONSLQ96HA7 1378 aa18.89■□□□□ 0.61
UBASH3B-204ENST00000526493 E9PCH4 1651 aa18.88■□□□□ 0.61
UBASH3B-204ENST00000526493 TET3O43151 1660 aa18.88■□□□□ 0.61
UBASH3B-204ENST00000526493 CEP152O94986 1710 aa18.86■□□□□ 0.61
UBASH3B-204ENST00000526493 YEATS2Q9ULM3 1422 aa18.85■□□□□ 0.61
UBASH3B-204ENST00000526493 KIF3BO15066 747 aa18.85■□□□□ 0.61
UBASH3B-204ENST00000526493 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
UBASH3B-204ENST00000526493 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
UBASH3B-204ENST00000526493 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
UBASH3B-204ENST00000526493 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
UBASH3B-204ENST00000526493 PLA2R1Q13018 1463 aa18.81■□□□□ 0.6
UBASH3B-204ENST00000526493 KANK1Q14678 1352 aa18.81■□□□□ 0.6
UBASH3B-204ENST00000526493 REREQ9P2R6 1566 aa18.8■□□□□ 0.6
UBASH3B-204ENST00000526493 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
UBASH3B-204ENST00000526493 ATP10AO60312 1499 aa18.79■□□□□ 0.6
UBASH3B-204ENST00000526493 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.6
UBASH3B-204ENST00000526493 L3MBTL2Q969R5 705 aa18.77■□□□□ 0.6
UBASH3B-204ENST00000526493 EFCAB6Q5THR3 1501 aa18.77■□□□□ 0.6
UBASH3B-204ENST00000526493 ARHGEF40Q8TER5 1519 aa18.77■□□□□ 0.6
UBASH3B-204ENST00000526493 SIGLEC1Q9BZZ2 1709 aa18.76■□□□□ 0.59
UBASH3B-204ENST00000526493 ZC3H13Q5T200 1668 aaKnown RBP18.74■□□□□ 0.59
UBASH3B-204ENST00000526493 ABCC3O15438 1527 aa18.74■□□□□ 0.59
UBASH3B-204ENST00000526493 TRPM2O94759 1503 aa18.74■□□□□ 0.59
UBASH3B-204ENST00000526493 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
UBASH3B-204ENST00000526493 CAMSAP1Q5T5Y3 1602 aa18.73■□□□□ 0.59
UBASH3B-204ENST00000526493 PTPRTO14522 1441 aa18.73■□□□□ 0.59
UBASH3B-204ENST00000526493 AGLP35573 1532 aa18.72■□□□□ 0.59
UBASH3B-204ENST00000526493 CCDC144AA2RUR9 1427 aa18.72■□□□□ 0.59
UBASH3B-204ENST00000526493 CLTCL1P53675 1640 aa18.71■□□□□ 0.58
UBASH3B-204ENST00000526493 GGT6Q6P531 493 aa18.7■□□□□ 0.58
UBASH3B-204ENST00000526493 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
UBASH3B-204ENST00000526493 KIF1BO60333 1816 aa18.66■□□□□ 0.58
UBASH3B-204ENST00000526493 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
UBASH3B-204ENST00000526493 NPATQ14207 1427 aa18.64■□□□□ 0.57
UBASH3B-204ENST00000526493 WASHC2CQ9Y4E1 1318 aa18.63■□□□□ 0.57
UBASH3B-204ENST00000526493 UHRF1BP1Q6BDS2 1440 aa18.63■□□□□ 0.57
UBASH3B-204ENST00000526493 SPATA31E1Q6ZUB1 1445 aa18.63■□□□□ 0.57
UBASH3B-204ENST00000526493 NEURL4Q96JN8 1562 aa18.62■□□□□ 0.57
UBASH3B-204ENST00000526493 CLTCQ00610 1675 aaKnown RBP18.61■□□□□ 0.57
UBASH3B-204ENST00000526493 UGGT1Q9NYU2 1555 aa18.61■□□□□ 0.57
UBASH3B-204ENST00000526493 ARHGAP31Q2M1Z3 1444 aa18.61■□□□□ 0.57
UBASH3B-204ENST00000526493 PREX1Q8TCU6 1659 aa18.6■□□□□ 0.57
UBASH3B-204ENST00000526493 MROH2AA6NES4 1674 aa18.59■□□□□ 0.57
UBASH3B-204ENST00000526493 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
UBASH3B-204ENST00000526493 SYNMO15061 1565 aa18.58■□□□□ 0.56
UBASH3B-204ENST00000526493 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
UBASH3B-204ENST00000526493 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
UBASH3B-204ENST00000526493 NOS1P29475 1434 aa18.57■□□□□ 0.56
UBASH3B-204ENST00000526493 TRPM1Q7Z4N2 1603 aa18.56■□□□□ 0.56
UBASH3B-204ENST00000526493 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
UBASH3B-204ENST00000526493 RALGAPBQ86X10 1494 aa18.55■□□□□ 0.56
UBASH3B-204ENST00000526493 RGL3Q3MIN7 710 aa18.55■□□□□ 0.56
UBASH3B-204ENST00000526493 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
UBASH3B-204ENST00000526493 PRAG1Q86YV5 1406 aa18.53■□□□□ 0.56
UBASH3B-204ENST00000526493 KDM2AQ9Y2K7 1162 aa18.53■□□□□ 0.56
UBASH3B-204ENST00000526493 ADGRB3O60242 1522 aa18.53■□□□□ 0.56
UBASH3B-204ENST00000526493 ZNF326Q5BKZ1 582 aaKnown RBP18.51■□□□□ 0.55
UBASH3B-204ENST00000526493 MADDQ8WXG6 1647 aa18.51■□□□□ 0.55
UBASH3B-204ENST00000526493 MYO5BQ9ULV0 1848 aa18.51■□□□□ 0.55
UBASH3B-204ENST00000526493 PPLO60437 1756 aa18.5■□□□□ 0.55
UBASH3B-204ENST00000526493 HIRIP3Q9BW71 556 aaPredicted RBP18.49■□□□□ 0.55
UBASH3B-204ENST00000526493 POLR1AO95602 1720 aaPredicted RBP18.49■□□□□ 0.55
UBASH3B-204ENST00000526493 HSPA5P11021 654 aaKnown RBP18.48■□□□□ 0.55
UBASH3B-204ENST00000526493 MLECQ14165 292 aa18.48■□□□□ 0.55
UBASH3B-204ENST00000526493 LAMC1P11047 1609 aa18.48■□□□□ 0.55
UBASH3B-204ENST00000526493 ERVK-7P63135 1459 aa18.47■□□□□ 0.55
UBASH3B-204ENST00000526493 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.55
UBASH3B-204ENST00000526493 SPATA31D1Q6ZQQ2 1576 aa18.46■□□□□ 0.55
UBASH3B-204ENST00000526493 KIAA1210Q9ULL0 1709 aa18.46■□□□□ 0.55
UBASH3B-204ENST00000526493 STAC3Q96MF2 364 aa18.44■□□□□ 0.54
UBASH3B-204ENST00000526493 TMEM131LA2VDJ0 1609 aa18.44■□□□□ 0.54
UBASH3B-204ENST00000526493 MYOM2P54296 1465 aa18.44■□□□□ 0.54
UBASH3B-204ENST00000526493 FER1L4A9Z1Z3 1794 aa18.43■□□□□ 0.54
UBASH3B-204ENST00000526493 ARID4BQ4LE39 1312 aaPredicted RBP18.43■□□□□ 0.54
UBASH3B-204ENST00000526493 FBXO31Q5XUX0 539 aaPredicted RBP18.42■□□□□ 0.54
UBASH3B-204ENST00000526493 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms