RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 ANKRD30AQ9BXX3 1397 aa22.1■■□□□ 1.13
LRRK1-204ENST00000525617 PREX1Q8TCU6 1659 aa22.09■■□□□ 1.13
LRRK1-204ENST00000525617 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
LRRK1-204ENST00000525617 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
LRRK1-204ENST00000525617 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
LRRK1-204ENST00000525617 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
LRRK1-204ENST00000525617 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
LRRK1-204ENST00000525617 NPATQ14207 1427 aa22.05■■□□□ 1.12
LRRK1-204ENST00000525617 ERBINQ96RT1 1412 aa22.05■■□□□ 1.12
LRRK1-204ENST00000525617 RNF17Q9BXT8 1623 aaKnown RBP22.04■■□□□ 1.12
LRRK1-204ENST00000525617 NCOA1Q15788 1441 aa22.04■■□□□ 1.12
LRRK1-204ENST00000525617 HSPA2P54652 639 aa22.03■■□□□ 1.12
LRRK1-204ENST00000525617 ADGRL2O95490 1459 aa22.02■■□□□ 1.12
LRRK1-204ENST00000525617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22■■□□□ 1.11
LRRK1-204ENST00000525617 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
LRRK1-204ENST00000525617 ZC3H13Q5T200 1668 aaKnown RBP21.98■■□□□ 1.11
LRRK1-204ENST00000525617 ITGAEP38570 1179 aa21.97■■□□□ 1.11
LRRK1-204ENST00000525617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.95■■□□□ 1.1
LRRK1-204ENST00000525617 KANK1Q14678 1352 aa21.95■■□□□ 1.1
LRRK1-204ENST00000525617 PZPP20742 1482 aa21.95■■□□□ 1.1
LRRK1-204ENST00000525617 MROH1Q8NDA8 1641 aa21.95■■□□□ 1.1
LRRK1-204ENST00000525617 ABCC3O15438 1527 aa21.94■■□□□ 1.1
LRRK1-204ENST00000525617 PRDM15P57071 1507 aaPredicted RBP21.93■■□□□ 1.1
LRRK1-204ENST00000525617 RRBP1Q9P2E9 1410 aaKnown RBP21.93■■□□□ 1.1
LRRK1-204ENST00000525617 ANKRD50Q9ULJ7 1429 aa21.92■■□□□ 1.1
LRRK1-204ENST00000525617 ROCK1Q13464 1354 aa21.92■■□□□ 1.1
LRRK1-204ENST00000525617 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
LRRK1-204ENST00000525617 CEP152O94986 1710 aa21.91■■□□□ 1.1
LRRK1-204ENST00000525617 DEPDC5O75140 1603 aa21.91■■□□□ 1.1
LRRK1-204ENST00000525617 MYO3AQ8NEV4 1616 aa21.9■■□□□ 1.1
LRRK1-204ENST00000525617 TNRQ92752 1358 aa21.89■■□□□ 1.1
LRRK1-204ENST00000525617 CAMSAP1Q5T5Y3 1602 aa21.88■■□□□ 1.09
LRRK1-204ENST00000525617 ZNF142P52746 1687 aaPredicted RBP21.86■■□□□ 1.09
LRRK1-204ENST00000525617 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
LRRK1-204ENST00000525617 CEP170BQ9Y4F5 1589 aaPredicted RBP21.86■■□□□ 1.09
LRRK1-204ENST00000525617 A2ML1A8K2U0 1454 aa21.83■■□□□ 1.09
LRRK1-204ENST00000525617 ARHGAP31Q2M1Z3 1444 aa21.83■■□□□ 1.09
LRRK1-204ENST00000525617 CFAP65Q6ZU64 1925 aaKnown RBP21.81■■□□□ 1.08
LRRK1-204ENST00000525617 ERVK-7P63135 1459 aa21.81■■□□□ 1.08
LRRK1-204ENST00000525617 NLRP1Q9C000 1473 aa21.81■■□□□ 1.08
LRRK1-204ENST00000525617 SPATA31D1Q6ZQQ2 1576 aa21.81■■□□□ 1.08
LRRK1-204ENST00000525617 VWDEQ8N2E2 1590 aa21.81■■□□□ 1.08
LRRK1-204ENST00000525617 STRCQ7RTU9 1775 aa21.81■■□□□ 1.08
LRRK1-204ENST00000525617 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
LRRK1-204ENST00000525617 UNC13BO14795 1591 aa21.77■■□□□ 1.08
LRRK1-204ENST00000525617 PLA2R1Q13018 1463 aa21.77■■□□□ 1.07
LRRK1-204ENST00000525617 THEMISQ8N1K5 641 aaPredicted RBP21.76■■□□□ 1.07
LRRK1-204ENST00000525617 PKD2Q13563 968 aa21.75■■□□□ 1.07
LRRK1-204ENST00000525617 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
LRRK1-204ENST00000525617 EFCAB6Q5THR3 1501 aa21.74■■□□□ 1.07
LRRK1-204ENST00000525617 PTPRTO14522 1441 aa21.73■■□□□ 1.07
LRRK1-204ENST00000525617 NCKAP5LQ9HCH0 1330 aa21.73■■□□□ 1.07
LRRK1-204ENST00000525617 NUP155O75694 1391 aa21.72■■□□□ 1.07
LRRK1-204ENST00000525617 TET3O43151 1660 aa21.71■■□□□ 1.07
LRRK1-204ENST00000525617 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
LRRK1-204ENST00000525617 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
LRRK1-204ENST00000525617 NAIPQ13075 1403 aa21.69■■□□□ 1.06
LRRK1-204ENST00000525617 IQGAP3Q86VI3 1631 aa21.69■■□□□ 1.06
LRRK1-204ENST00000525617 ANKLE2Q86XL3 938 aa21.68■■□□□ 1.06
LRRK1-204ENST00000525617 STAG3Q9UJ98 1225 aa21.67■■□□□ 1.06
LRRK1-204ENST00000525617 HFM1A2PYH4 1435 aa21.66■■□□□ 1.06
LRRK1-204ENST00000525617 NOS1P29475 1434 aa21.65■■□□□ 1.06
LRRK1-204ENST00000525617 POLR1AO95602 1720 aaPredicted RBP21.65■■□□□ 1.06
LRRK1-204ENST00000525617 SLC52A1Q9NWF4 448 aa21.64■■□□□ 1.05
LRRK1-204ENST00000525617 UBR1Q8IWV7 1749 aa21.63■■□□□ 1.05
LRRK1-204ENST00000525617 IDI1Q13907 227 aa21.63■■□□□ 1.05
LRRK1-204ENST00000525617 SYNMO15061 1565 aa21.62■■□□□ 1.05
LRRK1-204ENST00000525617 PIK3C2BO00750 1634 aa21.62■■□□□ 1.05
LRRK1-204ENST00000525617 E9PCH4 1651 aa21.61■■□□□ 1.05
LRRK1-204ENST00000525617 TRIM52Q96A61 297 aa21.6■■□□□ 1.05
LRRK1-204ENST00000525617 CERKQ8TCT0 537 aa21.58■■□□□ 1.05
LRRK1-204ENST00000525617 EID1Q9Y6B2 187 aa21.58■■□□□ 1.05
LRRK1-204ENST00000525617 KDM5AP29375 1690 aaKnown RBP21.58■■□□□ 1.05
LRRK1-204ENST00000525617 NEURL4Q96JN8 1562 aa21.57■■□□□ 1.04
LRRK1-204ENST00000525617 NPHP4O75161 1426 aaPredicted RBP21.55■■□□□ 1.04
LRRK1-204ENST00000525617 TXNDC2Q86VQ3 553 aa21.55■■□□□ 1.04
LRRK1-204ENST00000525617 MED14O60244 1454 aa21.55■■□□□ 1.04
LRRK1-204ENST00000525617 SLIT1O75093 1534 aa21.55■■□□□ 1.04
LRRK1-204ENST00000525617 SCAF11Q99590 1463 aaKnown RBP21.54■■□□□ 1.04
LRRK1-204ENST00000525617 ARHGAP23Q9P227 1491 aa21.54■■□□□ 1.04
LRRK1-204ENST00000525617 TMEM2Q9UHN6 1383 aa21.54■■□□□ 1.04
LRRK1-204ENST00000525617 ADGRB3O60242 1522 aa21.54■■□□□ 1.04
LRRK1-204ENST00000525617 ILDR1Q86SU0 546 aaPredicted RBP21.52■■□□□ 1.04
LRRK1-204ENST00000525617 FBXO41Q8TF61 875 aa21.52■■□□□ 1.04
LRRK1-204ENST00000525617 ZNF335Q9H4Z2 1342 aaPredicted RBP21.52■■□□□ 1.03
LRRK1-204ENST00000525617 IQGAP1P46940 1657 aa21.51■■□□□ 1.03
LRRK1-204ENST00000525617 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
LRRK1-204ENST00000525617 LTKP29376 864 aa21.51■■□□□ 1.03
LRRK1-204ENST00000525617 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
LRRK1-204ENST00000525617 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
LRRK1-204ENST00000525617 LTBP4Q8N2S1 1624 aa21.5■■□□□ 1.03
LRRK1-204ENST00000525617 HDGFP51858 240 aaKnown RBP21.49■■□□□ 1.03
LRRK1-204ENST00000525617 SPHKAPQ2M3C7 1700 aa21.49■■□□□ 1.03
LRRK1-204ENST00000525617 SETD5Q9C0A6 1442 aa21.46■■□□□ 1.03
LRRK1-204ENST00000525617 TMEM131LA2VDJ0 1609 aa21.46■■□□□ 1.03
LRRK1-204ENST00000525617 MYO5BQ9ULV0 1848 aa21.45■■□□□ 1.02
LRRK1-204ENST00000525617 PPP1R15AO75807 674 aaPredicted RBP21.43■■□□□ 1.02
LRRK1-204ENST00000525617 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.42■■□□□ 1.02
LRRK1-204ENST00000525617 BCANQ96GW7 911 aa21.42■■□□□ 1.02
LRRK1-204ENST00000525617 IQSEC2Q5JU85 1478 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms