RNA–Protein interactions for RNA: ENST00000525554.1

IFITM1-203, Transcript of interferon induced transmembrane protein 1, humanhuman

TSL 3

Gene IFITM1, Length 80 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-203ENST00000525554 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
IFITM1-203ENST00000525554 MYO3AQ8NEV4 1616 aa21.62■■□□□ 1.05
IFITM1-203ENST00000525554 CEP170BQ9Y4F5 1589 aaPredicted RBP21.62■■□□□ 1.05
IFITM1-203ENST00000525554 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
IFITM1-203ENST00000525554 LTBP4Q8N2S1 1624 aa21.62■■□□□ 1.05
IFITM1-203ENST00000525554 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
IFITM1-203ENST00000525554 A2ML1A8K2U0 1454 aa21.6■■□□□ 1.05
IFITM1-203ENST00000525554 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
IFITM1-203ENST00000525554 KDM5DQ9BY66 1539 aa21.6■■□□□ 1.05
IFITM1-203ENST00000525554 PZPP20742 1482 aa21.58■■□□□ 1.05
IFITM1-203ENST00000525554 MYOM3Q5VTT5 1437 aa21.57■■□□□ 1.04
IFITM1-203ENST00000525554 TNRQ92752 1358 aa21.57■■□□□ 1.04
IFITM1-203ENST00000525554 MAST1Q9Y2H9 1570 aa21.57■■□□□ 1.04
IFITM1-203ENST00000525554 FBXO31Q5XUX0 539 aaPredicted RBP21.56■■□□□ 1.04
IFITM1-203ENST00000525554 APLP2Q06481 763 aa21.55■■□□□ 1.04
IFITM1-203ENST00000525554 THEMISQ8N1K5 641 aaPredicted RBP21.53■■□□□ 1.04
IFITM1-203ENST00000525554 DNMT1P26358 1616 aaKnown RBP21.53■■□□□ 1.04
IFITM1-203ENST00000525554 NLRP1Q9C000 1473 aa21.52■■□□□ 1.03
IFITM1-203ENST00000525554 ZNF335Q9H4Z2 1342 aaPredicted RBP21.51■■□□□ 1.03
IFITM1-203ENST00000525554 RNF17Q9BXT8 1623 aaKnown RBP21.49■■□□□ 1.03
IFITM1-203ENST00000525554 ANKLE2Q86XL3 938 aa21.49■■□□□ 1.03
IFITM1-203ENST00000525554 EIF2AK4Q9P2K8 1649 aaKnown RBP21.48■■□□□ 1.03
IFITM1-203ENST00000525554 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
IFITM1-203ENST00000525554 ZC3H13Q5T200 1668 aaKnown RBP21.45■■□□□ 1.02
IFITM1-203ENST00000525554 ABCC3O15438 1527 aa21.45■■□□□ 1.02
IFITM1-203ENST00000525554 SHANK2Q9UPX8 1470 aa21.43■■□□□ 1.02
IFITM1-203ENST00000525554 UGGT1Q9NYU2 1555 aa21.43■■□□□ 1.02
IFITM1-203ENST00000525554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.42■■□□□ 1.02
IFITM1-203ENST00000525554 ABCC5O15440 1437 aa21.41■■□□□ 1.02
IFITM1-203ENST00000525554 UBAP1LF5GYI3 381 aa21.41■■□□□ 1.02
IFITM1-203ENST00000525554 SPATA31D1Q6ZQQ2 1576 aa21.4■■□□□ 1.02
IFITM1-203ENST00000525554 MED14O60244 1454 aa21.4■■□□□ 1.02
IFITM1-203ENST00000525554 KIF15Q9NS87 1388 aa21.4■■□□□ 1.02
IFITM1-203ENST00000525554 ERBINQ96RT1 1412 aa21.39■■□□□ 1.02
IFITM1-203ENST00000525554 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
IFITM1-203ENST00000525554 PTPN23Q9H3S7 1636 aa21.38■■□□□ 1.01
IFITM1-203ENST00000525554 NEURL4Q96JN8 1562 aa21.38■■□□□ 1.01
IFITM1-203ENST00000525554 ARHGAP31Q2M1Z3 1444 aa21.38■■□□□ 1.01
IFITM1-203ENST00000525554 DEPDC5O75140 1603 aa21.37■■□□□ 1.01
IFITM1-203ENST00000525554 MROH1Q8NDA8 1641 aa21.37■■□□□ 1.01
IFITM1-203ENST00000525554 RRP7BPQ9NSQ0 103 aa21.37■■□□□ 1.01
IFITM1-203ENST00000525554 CPS1P31327 1500 aa21.37■■□□□ 1.01
IFITM1-203ENST00000525554 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
IFITM1-203ENST00000525554 FGD6Q6ZV73 1430 aa21.37■■□□□ 1.01
IFITM1-203ENST00000525554 DAPK1P53355 1430 aa21.36■■□□□ 1.01
IFITM1-203ENST00000525554 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
IFITM1-203ENST00000525554 DISP3Q9P2K9 1392 aa21.35■■□□□ 1.01
IFITM1-203ENST00000525554 ANKRD30AQ9BXX3 1397 aa21.34■■□□□ 1.01
IFITM1-203ENST00000525554 PRDM15P57071 1507 aaPredicted RBP21.33■■□□□ 1
IFITM1-203ENST00000525554 CROCC2H7BZ55 1655 aa21.32■■□□□ 1
IFITM1-203ENST00000525554 TOM1O60784 492 aa21.32■■□□□ 1
IFITM1-203ENST00000525554 KANK1Q14678 1352 aa21.32■■□□□ 1
IFITM1-203ENST00000525554 VWDEQ8N2E2 1590 aa21.28■■□□□ 1
IFITM1-203ENST00000525554 CEP152O94986 1710 aa21.28■■□□□ 1
IFITM1-203ENST00000525554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.27■■□□□ 1
IFITM1-203ENST00000525554 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
IFITM1-203ENST00000525554 IQGAP1P46940 1657 aa21.25■□□□□ 0.99
IFITM1-203ENST00000525554 CFAP65Q6ZU64 1925 aaKnown RBP21.25■□□□□ 0.99
IFITM1-203ENST00000525554 LMTK2Q8IWU2 1503 aa21.24■□□□□ 0.99
IFITM1-203ENST00000525554 EID1Q9Y6B2 187 aa21.24■□□□□ 0.99
IFITM1-203ENST00000525554 SLIT1O75093 1534 aa21.24■□□□□ 0.99
IFITM1-203ENST00000525554 UBR1Q8IWV7 1749 aa21.24■□□□□ 0.99
IFITM1-203ENST00000525554 TXNDC2Q86VQ3 553 aa21.23■□□□□ 0.99
IFITM1-203ENST00000525554 SCAF11Q99590 1463 aaKnown RBP21.23■□□□□ 0.99
IFITM1-203ENST00000525554 ARHGAP23Q9P227 1491 aa21.23■□□□□ 0.99
IFITM1-203ENST00000525554 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
IFITM1-203ENST00000525554 LTKP29376 864 aa21.21■□□□□ 0.99
IFITM1-203ENST00000525554 ILDR2Q71H61 639 aa21.2■□□□□ 0.98
IFITM1-203ENST00000525554 FAM50AQ14320 339 aaKnown RBP21.19■□□□□ 0.98
IFITM1-203ENST00000525554 STAG3Q9UJ98 1225 aa21.19■□□□□ 0.98
IFITM1-203ENST00000525554 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
IFITM1-203ENST00000525554 IDI1Q13907 227 aa21.18■□□□□ 0.98
IFITM1-203ENST00000525554 SLC52A1Q9NWF4 448 aa21.18■□□□□ 0.98
IFITM1-203ENST00000525554 TMEM2Q9UHN6 1383 aa21.18■□□□□ 0.98
IFITM1-203ENST00000525554 SOCS7O14512 581 aa21.17■□□□□ 0.98
IFITM1-203ENST00000525554 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
IFITM1-203ENST00000525554 KDM5AP29375 1690 aaKnown RBP21.17■□□□□ 0.98
IFITM1-203ENST00000525554 LRRC7Q96NW7 1537 aa21.16■□□□□ 0.98
IFITM1-203ENST00000525554 ANKRD50Q9ULJ7 1429 aa21.15■□□□□ 0.98
IFITM1-203ENST00000525554 HSPA1LP34931 641 aa21.15■□□□□ 0.98
IFITM1-203ENST00000525554 NOS1P29475 1434 aa21.14■□□□□ 0.98
IFITM1-203ENST00000525554 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
IFITM1-203ENST00000525554 PIK3C2BO00750 1634 aa21.13■□□□□ 0.97
IFITM1-203ENST00000525554 SYNMO15061 1565 aa21.13■□□□□ 0.97
IFITM1-203ENST00000525554 EFCAB6Q5THR3 1501 aa21.12■□□□□ 0.97
IFITM1-203ENST00000525554 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
IFITM1-203ENST00000525554 ROCK1Q13464 1354 aa21.08■□□□□ 0.96
IFITM1-203ENST00000525554 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
IFITM1-203ENST00000525554 HDGFP51858 240 aaKnown RBP21.07■□□□□ 0.96
IFITM1-203ENST00000525554 KCNA6P17658 529 aa21.06■□□□□ 0.96
IFITM1-203ENST00000525554 TET3O43151 1660 aa21.03■□□□□ 0.96
IFITM1-203ENST00000525554 ADGRB3O60242 1522 aa21.03■□□□□ 0.96
IFITM1-203ENST00000525554 SLC26A8Q96RN1 970 aa21■□□□□ 0.95
IFITM1-203ENST00000525554 UNC13BO14795 1591 aa20.98■□□□□ 0.95
IFITM1-203ENST00000525554 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.98■□□□□ 0.95
IFITM1-203ENST00000525554 PROSER2Q86WR7 435 aaPredicted RBP20.97■□□□□ 0.95
IFITM1-203ENST00000525554 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
IFITM1-203ENST00000525554 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
IFITM1-203ENST00000525554 ZFYVE9O95405 1425 aa20.96■□□□□ 0.95
IFITM1-203ENST00000525554 FAM135BQ49AJ0 1406 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms