RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 KDM5DQ9BY66 1539 aa16.29■□□□□ 0.2
RBBP4-216ENST00000525506 CFAP65Q6ZU64 1925 aaKnown RBP16.29■□□□□ 0.2
RBBP4-216ENST00000525506 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
RBBP4-216ENST00000525506 ABCC5O15440 1437 aa16.28■□□□□ 0.2
RBBP4-216ENST00000525506 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
RBBP4-216ENST00000525506 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
RBBP4-216ENST00000525506 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
RBBP4-216ENST00000525506 CEP170BQ9Y4F5 1589 aaPredicted RBP16.28■□□□□ 0.2
RBBP4-216ENST00000525506 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
RBBP4-216ENST00000525506 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.2
RBBP4-216ENST00000525506 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
RBBP4-216ENST00000525506 CEP152O94986 1710 aa16.25■□□□□ 0.19
RBBP4-216ENST00000525506 PZPP20742 1482 aa16.25■□□□□ 0.19
RBBP4-216ENST00000525506 TCOF1Q13428 1488 aaKnown RBP16.25■□□□□ 0.19
RBBP4-216ENST00000525506 RRP7BPQ9NSQ0 103 aa16.25■□□□□ 0.19
RBBP4-216ENST00000525506 DNMT1P26358 1616 aaKnown RBP16.25■□□□□ 0.19
RBBP4-216ENST00000525506 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
RBBP4-216ENST00000525506 PTPRTO14522 1441 aa16.25■□□□□ 0.19
RBBP4-216ENST00000525506 DAPK1P53355 1430 aa16.25■□□□□ 0.19
RBBP4-216ENST00000525506 MROH1Q8NDA8 1641 aa16.24■□□□□ 0.19
RBBP4-216ENST00000525506 CHIC2Q9UKJ5 165 aa16.24■□□□□ 0.19
RBBP4-216ENST00000525506 TNRQ92752 1358 aa16.24■□□□□ 0.19
RBBP4-216ENST00000525506 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
RBBP4-216ENST00000525506 FAM135AQ9P2D6 1515 aa16.24■□□□□ 0.19
RBBP4-216ENST00000525506 ABCC3O15438 1527 aa16.23■□□□□ 0.19
RBBP4-216ENST00000525506 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
RBBP4-216ENST00000525506 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
RBBP4-216ENST00000525506 SHANK2Q9UPX8 1470 aa16.22■□□□□ 0.19
RBBP4-216ENST00000525506 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.18
RBBP4-216ENST00000525506 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
RBBP4-216ENST00000525506 PLA2R1Q13018 1463 aa16.19■□□□□ 0.18
RBBP4-216ENST00000525506 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
RBBP4-216ENST00000525506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.184e-8■■■■□ 21.8
RBBP4-216ENST00000525506 LTBP4Q8N2S1 1624 aa16.18■□□□□ 0.18
RBBP4-216ENST00000525506 PKD2Q13563 968 aa16.17■□□□□ 0.18
RBBP4-216ENST00000525506 POLR1AO95602 1720 aaPredicted RBP16.16■□□□□ 0.18
RBBP4-216ENST00000525506 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
RBBP4-216ENST00000525506 ANKRD30AQ9BXX3 1397 aa16.15■□□□□ 0.18
RBBP4-216ENST00000525506 SPATA31D1Q6ZQQ2 1576 aa16.15■□□□□ 0.18
RBBP4-216ENST00000525506 ERVK-7P63135 1459 aa16.15■□□□□ 0.18
RBBP4-216ENST00000525506 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
RBBP4-216ENST00000525506 PRDM15P57071 1507 aaPredicted RBP16.14■□□□□ 0.18
RBBP4-216ENST00000525506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.14■□□□□ 0.17
RBBP4-216ENST00000525506 DEPDC5O75140 1603 aa16.14■□□□□ 0.17
RBBP4-216ENST00000525506 UGGT1Q9NYU2 1555 aa16.13■□□□□ 0.17
RBBP4-216ENST00000525506 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
RBBP4-216ENST00000525506 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
RBBP4-216ENST00000525506 ADGRL2O95490 1459 aa16.1■□□□□ 0.17
RBBP4-216ENST00000525506 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
RBBP4-216ENST00000525506 ANKLE2Q86XL3 938 aa16.09■□□□□ 0.17
RBBP4-216ENST00000525506 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.17
RBBP4-216ENST00000525506 KANK1Q14678 1352 aa16.08■□□□□ 0.16
RBBP4-216ENST00000525506 ARHGAP31Q2M1Z3 1444 aa16.07■□□□□ 0.16
RBBP4-216ENST00000525506 VWDEQ8N2E2 1590 aa16.07■□□□□ 0.16
RBBP4-216ENST00000525506 ITGAEP38570 1179 aa16.05■□□□□ 0.16
RBBP4-216ENST00000525506 ANKRD50Q9ULJ7 1429 aa16.04■□□□□ 0.16
RBBP4-216ENST00000525506 IQGAP1P46940 1657 aa16.04■□□□□ 0.16
RBBP4-216ENST00000525506 PIK3C2BO00750 1634 aa16.04■□□□□ 0.16
RBBP4-216ENST00000525506 NPHP4O75161 1426 aaPredicted RBP16.03■□□□□ 0.16
RBBP4-216ENST00000525506 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
RBBP4-216ENST00000525506 LMTK2Q8IWU2 1503 aa16.03■□□□□ 0.16
RBBP4-216ENST00000525506 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
RBBP4-216ENST00000525506 MED14O60244 1454 aa16.02■□□□□ 0.15
RBBP4-216ENST00000525506 ROCK1Q13464 1354 aa16.01■□□□□ 0.15
RBBP4-216ENST00000525506 SYNMO15061 1565 aa16.01■□□□□ 0.15
RBBP4-216ENST00000525506 EFCAB6Q5THR3 1501 aa16.01■□□□□ 0.15
RBBP4-216ENST00000525506 STRCP1A6NGW2 1772 aa16■□□□□ 0.15
RBBP4-216ENST00000525506 LTKP29376 864 aa16■□□□□ 0.15
RBBP4-216ENST00000525506 IDI1Q13907 227 aa15.99■□□□□ 0.15
RBBP4-216ENST00000525506 UBAP1LF5GYI3 381 aa15.98■□□□□ 0.15
RBBP4-216ENST00000525506 TXNDC2Q86VQ3 553 aa15.98■□□□□ 0.15
RBBP4-216ENST00000525506 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
RBBP4-216ENST00000525506 SCAF11Q99590 1463 aaKnown RBP15.97■□□□□ 0.15
RBBP4-216ENST00000525506 UNC13BO14795 1591 aa15.97■□□□□ 0.15
RBBP4-216ENST00000525506 NOS1P29475 1434 aa15.97■□□□□ 0.15
RBBP4-216ENST00000525506 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
RBBP4-216ENST00000525506 TET3O43151 1660 aa15.97■□□□□ 0.15
RBBP4-216ENST00000525506 SLIT1O75093 1534 aa15.97■□□□□ 0.15
RBBP4-216ENST00000525506 ARHGAP23Q9P227 1491 aa15.97■□□□□ 0.15
RBBP4-216ENST00000525506 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
RBBP4-216ENST00000525506 CPS1P31327 1500 aa15.95■□□□□ 0.14
RBBP4-216ENST00000525506 E9PCH4 1651 aa15.94■□□□□ 0.14
RBBP4-216ENST00000525506 KDM5AP29375 1690 aaKnown RBP15.93■□□□□ 0.14
RBBP4-216ENST00000525506 TMEM2Q9UHN6 1383 aa15.93■□□□□ 0.14
RBBP4-216ENST00000525506 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
RBBP4-216ENST00000525506 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
RBBP4-216ENST00000525506 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
RBBP4-216ENST00000525506 IQGAP3Q86VI3 1631 aa15.91■□□□□ 0.14
RBBP4-216ENST00000525506 ADGRB3O60242 1522 aa15.91■□□□□ 0.14
RBBP4-216ENST00000525506 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
RBBP4-216ENST00000525506 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
RBBP4-216ENST00000525506 SLC52A1Q9NWF4 448 aa15.89■□□□□ 0.13
RBBP4-216ENST00000525506 NUP155O75694 1391 aa15.88■□□□□ 0.13
RBBP4-216ENST00000525506 LRRC7Q96NW7 1537 aa15.88■□□□□ 0.13
RBBP4-216ENST00000525506 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
RBBP4-216ENST00000525506 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
RBBP4-216ENST00000525506 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
RBBP4-216ENST00000525506 TOM1O60784 492 aa15.86■□□□□ 0.13
RBBP4-216ENST00000525506 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
RBBP4-216ENST00000525506 SLC26A8Q96RN1 970 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms