RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 DCAF11Q8TEB1 546 aa22.67■■□□□ 1.22
CCDC90B-203ENST00000525503 BCANQ96GW7 911 aa22.67■■□□□ 1.22
CCDC90B-203ENST00000525503 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
CCDC90B-203ENST00000525503 KDM2AQ9Y2K7 1162 aa22.65■■□□□ 1.22
CCDC90B-203ENST00000525503 ERBINQ96RT1 1412 aa22.65■■□□□ 1.22
CCDC90B-203ENST00000525503 IQGAP3Q86VI3 1631 aa22.65■■□□□ 1.22
CCDC90B-203ENST00000525503 FAM9BQ8IZU0 186 aa22.62■■□□□ 1.21
CCDC90B-203ENST00000525503 ABCC1P33527 1531 aa22.61■■□□□ 1.21
CCDC90B-203ENST00000525503 MAGI2Q86UL8 1455 aa22.61■■□□□ 1.21
CCDC90B-203ENST00000525503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.61■■□□□ 1.21
CCDC90B-203ENST00000525503 POLR3GLQ9BT43 218 aa22.61■■□□□ 1.21
CCDC90B-203ENST00000525503 PLA2R1Q13018 1463 aa22.59■■□□□ 1.21
CCDC90B-203ENST00000525503 PRAG1Q86YV5 1406 aa22.59■■□□□ 1.21
CCDC90B-203ENST00000525503 ZBED9Q6R2W3 1325 aa22.59■■□□□ 1.21
CCDC90B-203ENST00000525503 TSHZ2Q9NRE2 1034 aa22.59■■□□□ 1.21
CCDC90B-203ENST00000525503 ARAP3Q8WWN8 1544 aa22.58■■□□□ 1.21
CCDC90B-203ENST00000525503 ATP10AO60312 1499 aa22.57■■□□□ 1.2
CCDC90B-203ENST00000525503 ST20-MTHFSA0A0A6YYL1 179 aa22.57■■□□□ 1.2
CCDC90B-203ENST00000525503 TRPM1Q7Z4N2 1603 aa22.55■■□□□ 1.2
CCDC90B-203ENST00000525503 RTEL1-TNFRSF6BF6WH68 1400 aa22.53■■□□□ 1.2
CCDC90B-203ENST00000525503 TRAPPC8Q9Y2L5 1435 aa22.53■■□□□ 1.2
CCDC90B-203ENST00000525503 A2MP01023 1474 aa22.52■■□□□ 1.2
CCDC90B-203ENST00000525503 GPRASP1Q5JY77 1395 aa22.52■■□□□ 1.19
CCDC90B-203ENST00000525503 KTN1Q86UP2 1357 aaKnown RBP22.52■■□□□ 1.19
CCDC90B-203ENST00000525503 ERICH6BQ5W0A0 696 aa22.51■■□□□ 1.19
CCDC90B-203ENST00000525503 SPAG9O60271 1321 aaKnown RBP22.5■■□□□ 1.19
CCDC90B-203ENST00000525503 LAMC1P11047 1609 aa22.5■■□□□ 1.19
CCDC90B-203ENST00000525503 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
CCDC90B-203ENST00000525503 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
CCDC90B-203ENST00000525503 WDR7Q9Y4E6 1490 aa22.48■■□□□ 1.19
CCDC90B-203ENST00000525503 ZFYVE16Q7Z3T8 1539 aa22.45■■□□□ 1.18
CCDC90B-203ENST00000525503 RALBP1Q15311 655 aa22.45■■□□□ 1.18
CCDC90B-203ENST00000525503 E9PCH4 1651 aa22.44■■□□□ 1.18
CCDC90B-203ENST00000525503 PRDM15P57071 1507 aaPredicted RBP22.44■■□□□ 1.18
CCDC90B-203ENST00000525503 NBPF1Q3BBV0 1214 aa22.42■■□□□ 1.18
CCDC90B-203ENST00000525503 TMC1Q8TDI8 760 aa22.42■■□□□ 1.18
CCDC90B-203ENST00000525503 CNGB1Q14028 1251 aaPredicted RBP22.41■■□□□ 1.18
CCDC90B-203ENST00000525503 BRD4O60885 1362 aaPredicted RBP22.4■■□□□ 1.18
CCDC90B-203ENST00000525503 MYBBP1AQ9BQG0 1328 aaKnown RBP22.4■■□□□ 1.18
CCDC90B-203ENST00000525503 AFAP1Q8N556 730 aa22.4■■□□□ 1.18
CCDC90B-203ENST00000525503 ABCA9Q8IUA7 1624 aa22.4■■□□□ 1.18
CCDC90B-203ENST00000525503 FANCAO15360 1455 aa22.4■■□□□ 1.18
CCDC90B-203ENST00000525503 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.18
CCDC90B-203ENST00000525503 COL17A1Q9UMD9 1497 aaPredicted RBP22.38■■□□□ 1.17
CCDC90B-203ENST00000525503 SMG6Q86US8 1419 aaKnown RBP22.38■■□□□ 1.17
CCDC90B-203ENST00000525503 TRPM2O94759 1503 aa22.37■■□□□ 1.17
CCDC90B-203ENST00000525503 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
CCDC90B-203ENST00000525503 DEPDC5O75140 1603 aa22.37■■□□□ 1.17
CCDC90B-203ENST00000525503 KANK1Q14678 1352 aa22.36■■□□□ 1.17
CCDC90B-203ENST00000525503 ATP7AQ04656 1500 aa22.36■■□□□ 1.17
CCDC90B-203ENST00000525503 IRX6P78412 446 aaPredicted RBP22.36■■□□□ 1.17
CCDC90B-203ENST00000525503 INO80Q9ULG1 1556 aaPredicted RBP22.36■■□□□ 1.17
CCDC90B-203ENST00000525503 PTPRTO14522 1441 aa22.35■■□□□ 1.17
CCDC90B-203ENST00000525503 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
CCDC90B-203ENST00000525503 RNF17Q9BXT8 1623 aaKnown RBP22.34■■□□□ 1.17
CCDC90B-203ENST00000525503 TESK2Q96S53 571 aa22.33■■□□□ 1.17
CCDC90B-203ENST00000525503 WASHC2CQ9Y4E1 1318 aa22.33■■□□□ 1.17
CCDC90B-203ENST00000525503 MYT1Q01538 1121 aa22.33■■□□□ 1.16
CCDC90B-203ENST00000525503 TMF1P82094 1093 aa22.32■■□□□ 1.16
CCDC90B-203ENST00000525503 TET3O43151 1660 aa22.32■■□□□ 1.16
CCDC90B-203ENST00000525503 LRPPRCP42704 1394 aaKnown RBP22.32■■□□□ 1.16
CCDC90B-203ENST00000525503 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
CCDC90B-203ENST00000525503 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
CCDC90B-203ENST00000525503 NUDCQ9Y266 331 aa22.3■■□□□ 1.16
CCDC90B-203ENST00000525503 ASXL2Q76L83 1435 aa22.3■■□□□ 1.16
CCDC90B-203ENST00000525503 SCAPERQ9BY12 1400 aa22.3■■□□□ 1.16
CCDC90B-203ENST00000525503 VWDEQ8N2E2 1590 aa22.3■■□□□ 1.16
CCDC90B-203ENST00000525503 SPHKAPQ2M3C7 1700 aa22.29■■□□□ 1.16
CCDC90B-203ENST00000525503 DISP3Q9P2K9 1392 aa22.29■■□□□ 1.16
CCDC90B-203ENST00000525503 NLRP13Q86W25 1043 aa22.29■■□□□ 1.16
CCDC90B-203ENST00000525503 MADDQ8WXG6 1647 aa22.28■■□□□ 1.16
CCDC90B-203ENST00000525503 CEP152O94986 1710 aa22.27■■□□□ 1.16
CCDC90B-203ENST00000525503 PER1O15534 1290 aaPredicted RBP22.27■■□□□ 1.16
CCDC90B-203ENST00000525503 MYT1LQ9UL68 1186 aa22.25■■□□□ 1.15
CCDC90B-203ENST00000525503 CLTCL1P53675 1640 aa22.25■■□□□ 1.15
CCDC90B-203ENST00000525503 KIF3BO15066 747 aa22.24■■□□□ 1.15
CCDC90B-203ENST00000525503 NEURL4Q96JN8 1562 aa22.24■■□□□ 1.15
CCDC90B-203ENST00000525503 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
CCDC90B-203ENST00000525503 NPM1P06748 294 aaKnown RBP eCLIP22.21■■□□□ 1.15
CCDC90B-203ENST00000525503 IQGAP1P46940 1657 aa22.21■■□□□ 1.15
CCDC90B-203ENST00000525503 PANK3Q9H999 370 aa22.21■■□□□ 1.15
CCDC90B-203ENST00000525503 RNF123Q5XPI4 1314 aa22.21■■□□□ 1.15
CCDC90B-203ENST00000525503 SCAF11Q99590 1463 aaKnown RBP22.2■■□□□ 1.14
CCDC90B-203ENST00000525503 CDCA8Q53HL2 280 aa22.19■■□□□ 1.14
CCDC90B-203ENST00000525503 ZNF518AQ6AHZ1 1483 aa22.19■■□□□ 1.14
CCDC90B-203ENST00000525503 MROH1Q8NDA8 1641 aa22.19■■□□□ 1.14
CCDC90B-203ENST00000525503 INSRP06213 1382 aa22.18■■□□□ 1.14
CCDC90B-203ENST00000525503 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
CCDC90B-203ENST00000525503 CFAP74Q9C0B2 1584 aa22.16■■□□□ 1.14
CCDC90B-203ENST00000525503 EIF3AQ14152 1382 aaKnown RBP22.16■■□□□ 1.14
CCDC90B-203ENST00000525503 KIAA1210Q9ULL0 1709 aa22.15■■□□□ 1.14
CCDC90B-203ENST00000525503 ZMYM4Q5VZL5 1548 aa22.15■■□□□ 1.14
CCDC90B-203ENST00000525503 EFCAB6Q5THR3 1501 aa22.14■■□□□ 1.14
CCDC90B-203ENST00000525503 KIDINS220Q9ULH0 1771 aa22.14■■□□□ 1.14
CCDC90B-203ENST00000525503 LMTK2Q8IWU2 1503 aa22.14■■□□□ 1.13
CCDC90B-203ENST00000525503 CC2D1BQ5T0F9 858 aaKnown RBP22.14■■□□□ 1.13
CCDC90B-203ENST00000525503 MYOM2P54296 1465 aa22.13■■□□□ 1.13
CCDC90B-203ENST00000525503 PDE3BQ13370 1112 aa22.12■■□□□ 1.13
CCDC90B-203ENST00000525503 SLC24A1O60721 1099 aa22.12■■□□□ 1.13
CCDC90B-203ENST00000525503 B4GALNT3Q6L9W6 998 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms