RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 CCDC141Q6ZP82 1450 aa15.37■□□□□ 0.05
TRAPPC4-206ENST00000525303 NCOA2Q15596 1464 aa15.36■□□□□ 0.05
TRAPPC4-206ENST00000525303 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-206ENST00000525303 KDM5DQ9BY66 1539 aa15.35■□□□□ 0.05
TRAPPC4-206ENST00000525303 CFAP65Q6ZU64 1925 aaKnown RBP15.35■□□□□ 0.05
TRAPPC4-206ENST00000525303 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.05
TRAPPC4-206ENST00000525303 ARHGEF5Q12774 1597 aa15.33■□□□□ 0.05
TRAPPC4-206ENST00000525303 NEURL4Q96JN8 1562 aa15.33■□□□□ 0.05
TRAPPC4-206ENST00000525303 UBAP1LF5GYI3 381 aa15.32■□□□□ 0.04
TRAPPC4-206ENST00000525303 KIF3BO15066 747 aa15.32■□□□□ 0.04
TRAPPC4-206ENST00000525303 PZPP20742 1482 aa15.32■□□□□ 0.04
TRAPPC4-206ENST00000525303 FBXO31Q5XUX0 539 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC4-206ENST00000525303 TNRQ92752 1358 aa15.31■□□□□ 0.04
TRAPPC4-206ENST00000525303 SOCS7O14512 581 aa15.3■□□□□ 0.04
TRAPPC4-206ENST00000525303 RSPH4AQ5TD94 716 aa15.29■□□□□ 0.04
TRAPPC4-206ENST00000525303 ZC3H13Q5T200 1668 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-206ENST00000525303 RNF17Q9BXT8 1623 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-206ENST00000525303 WASHC2CQ9Y4E1 1318 aa15.28■□□□□ 0.04
TRAPPC4-206ENST00000525303 CEP152O94986 1710 aa15.27■□□□□ 0.04
TRAPPC4-206ENST00000525303 MAST1Q9Y2H9 1570 aa15.26■□□□□ 0.03
TRAPPC4-206ENST00000525303 CPS1P31327 1500 aa15.26■□□□□ 0.03
TRAPPC4-206ENST00000525303 IQGAP1P46940 1657 aa15.25■□□□□ 0.03
TRAPPC4-206ENST00000525303 DEPDC5O75140 1603 aa15.25■□□□□ 0.03
TRAPPC4-206ENST00000525303 EIF2AK4Q9P2K8 1649 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-206ENST00000525303 UGGT1Q9NYU2 1555 aa15.25■□□□□ 0.03
TRAPPC4-206ENST00000525303 LRRC9Q6ZRR7 1453 aa15.25■□□□□ 0.03
TRAPPC4-206ENST00000525303 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
TRAPPC4-206ENST00000525303 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
TRAPPC4-206ENST00000525303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.033e-6■■■■□ 26.4
TRAPPC4-206ENST00000525303 VWDEQ8N2E2 1590 aa15.24■□□□□ 0.03
TRAPPC4-206ENST00000525303 TSPY4P0CV99 314 aa15.24■□□□□ 0.03
TRAPPC4-206ENST00000525303 TSPY10P0CW01 314 aa15.24■□□□□ 0.03
TRAPPC4-206ENST00000525303 MIA2Q96PC5 1412 aa15.24■□□□□ 0.03
TRAPPC4-206ENST00000525303 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
TRAPPC4-206ENST00000525303 ABCC3O15438 1527 aa15.23■□□□□ 0.03
TRAPPC4-206ENST00000525303 VPS8Q8N3P4 1428 aa15.23■□□□□ 0.03
TRAPPC4-206ENST00000525303 MROH1Q8NDA8 1641 aa15.21■□□□□ 0.03
TRAPPC4-206ENST00000525303 ANKLE2Q86XL3 938 aa15.21■□□□□ 0.03
TRAPPC4-206ENST00000525303 THEMISQ8N1K5 641 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-206ENST00000525303 MED14O60244 1454 aa15.2■□□□□ 0.02
TRAPPC4-206ENST00000525303 UBR1Q8IWV7 1749 aa15.2■□□□□ 0.02
TRAPPC4-206ENST00000525303 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-206ENST00000525303 CROCC2H7BZ55 1655 aa15.2■□□□□ 0.02
TRAPPC4-206ENST00000525303 NPHP4O75161 1426 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-206ENST00000525303 PIP4K2BP78356 416 aa15.19■□□□□ 0.02
TRAPPC4-206ENST00000525303 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
TRAPPC4-206ENST00000525303 MED1Q15648 1581 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-206ENST00000525303 ERVK-7P63135 1459 aa15.17■□□□□ 0.02
TRAPPC4-206ENST00000525303 TOM1O60784 492 aa15.17■□□□□ 0.02
TRAPPC4-206ENST00000525303 ALKQ9UM73 1620 aa15.17■□□□□ 0.02
TRAPPC4-206ENST00000525303 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
TRAPPC4-206ENST00000525303 HSPA1LP34931 641 aa15.16■□□□□ 0.02
TRAPPC4-206ENST00000525303 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-206ENST00000525303 DUOX2Q9NRD8 1548 aa15.16■□□□□ 0.02
TRAPPC4-206ENST00000525303 SYNMO15061 1565 aa15.15■□□□□ 0.02
TRAPPC4-206ENST00000525303 LOC105371045A0A1W2PR82 267 aa15.15■□□□□ 0.02
TRAPPC4-206ENST00000525303 XIRP1Q702N8 1843 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-206ENST00000525303 PTPN23Q9H3S7 1636 aa15.13■□□□□ 0.01
TRAPPC4-206ENST00000525303 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC4-206ENST00000525303 LRRC7Q96NW7 1537 aa15.12■□□□□ 0.01
TRAPPC4-206ENST00000525303 PIK3C2BO00750 1634 aa15.1■□□□□ 0.01
TRAPPC4-206ENST00000525303 KIF15Q9NS87 1388 aa15.09■□□□□ 0.01
TRAPPC4-206ENST00000525303 ERBINQ96RT1 1412 aa15.09■□□□□ 0.01
TRAPPC4-206ENST00000525303 SCAF11Q99590 1463 aaKnown RBP15.08■□□□□ 0.01
TRAPPC4-206ENST00000525303 SLIT1O75093 1534 aa15.07■□□□□ 0
TRAPPC4-206ENST00000525303 ABCC5O15440 1437 aa15.07■□□□□ 0
TRAPPC4-206ENST00000525303 ARHGAP31Q2M1Z3 1444 aa15.07■□□□□ 0
TRAPPC4-206ENST00000525303 ARHGAP23Q9P227 1491 aa15.07■□□□□ 0
TRAPPC4-206ENST00000525303 KDM5AP29375 1690 aaKnown RBP15.06■□□□□ 0
TRAPPC4-206ENST00000525303 RRP7BPQ9NSQ0 103 aa15.05■□□□□ -0
TRAPPC4-206ENST00000525303 DAPK1P53355 1430 aa15.05■□□□□ -0
TRAPPC4-206ENST00000525303 LTKP29376 864 aa15.04■□□□□ -0
TRAPPC4-206ENST00000525303 TXNDC2Q86VQ3 553 aa15.03■□□□□ -0
TRAPPC4-206ENST00000525303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
TRAPPC4-206ENST00000525303 MYO5BQ9ULV0 1848 aa15.03■□□□□ -0
TRAPPC4-206ENST00000525303 FGD6Q6ZV73 1430 aa15.01□□□□□ -0.01
TRAPPC4-206ENST00000525303 KANK1Q14678 1352 aa15.01□□□□□ -0.01
TRAPPC4-206ENST00000525303 APLP2Q06481 763 aa15.01□□□□□ -0.01
TRAPPC4-206ENST00000525303 EID1Q9Y6B2 187 aa15□□□□□ -0.01
TRAPPC4-206ENST00000525303 EFCAB6Q5THR3 1501 aa15□□□□□ -0.01
TRAPPC4-206ENST00000525303 LMTK2Q8IWU2 1503 aa15□□□□□ -0.01
TRAPPC4-206ENST00000525303 TMEM2Q9UHN6 1383 aa14.98□□□□□ -0.01
TRAPPC4-206ENST00000525303 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
TRAPPC4-206ENST00000525303 CHIC2Q9UKJ5 165 aa14.98□□□□□ -0.01
TRAPPC4-206ENST00000525303 ANKRD30AQ9BXX3 1397 aa14.98□□□□□ -0.01
TRAPPC4-206ENST00000525303 TET3O43151 1660 aa14.96□□□□□ -0.01
TRAPPC4-206ENST00000525303 GCC2Q8IWJ2 1684 aa14.96□□□□□ -0.01
TRAPPC4-206ENST00000525303 ADGRB3O60242 1522 aa14.96□□□□□ -0.02
TRAPPC4-206ENST00000525303 IDI1Q13907 227 aa14.95□□□□□ -0.02
TRAPPC4-206ENST00000525303 ROBO1Q9Y6N7 1651 aa14.95□□□□□ -0.02
TRAPPC4-206ENST00000525303 CHD2O14647 1828 aaKnown RBP14.94□□□□□ -0.02
TRAPPC4-206ENST00000525303 NOS1P29475 1434 aa14.93□□□□□ -0.02
TRAPPC4-206ENST00000525303 ADGRL2O95490 1459 aa14.93□□□□□ -0.02
TRAPPC4-206ENST00000525303 TMEM94Q12767 1356 aa14.92□□□□□ -0.02
TRAPPC4-206ENST00000525303 NWD1Q149M9 1564 aa14.92□□□□□ -0.02
TRAPPC4-206ENST00000525303 SLC26A8Q96RN1 970 aa14.91□□□□□ -0.02
TRAPPC4-206ENST00000525303 KCNA6P17658 529 aa14.9□□□□□ -0.02
TRAPPC4-206ENST00000525303 FAM135BQ49AJ0 1406 aa14.9□□□□□ -0.02
TRAPPC4-206ENST00000525303 NKTRP30414 1462 aaKnown RBP14.89□□□□□ -0.03
TRAPPC4-206ENST00000525303 RPRD2Q5VT52 1461 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms