RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 RTEL1-TNFRSF6BF6WH68 1400 aa9.88□□□□□ -0.83
CD44-214ENST00000525211 NCOA1Q15788 1441 aa9.88□□□□□ -0.83
CD44-214ENST00000525211 ADGBQ8N7X0 1667 aa9.87□□□□□ -0.83
CD44-214ENST00000525211 ADGRL2O95490 1459 aa9.87□□□□□ -0.83
CD44-214ENST00000525211 SHANK2Q9UPX8 1470 aa9.87□□□□□ -0.83
CD44-214ENST00000525211 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
CD44-214ENST00000525211 ATP10AO60312 1499 aa9.86□□□□□ -0.83
CD44-214ENST00000525211 FKBP8Q14318 412 aa9.86□□□□□ -0.83
CD44-214ENST00000525211 KIF15Q9NS87 1388 aa9.86□□□□□ -0.83
CD44-214ENST00000525211 A2MP01023 1474 aa9.85□□□□□ -0.83
CD44-214ENST00000525211 MAGI2Q86UL8 1455 aa9.85□□□□□ -0.83
CD44-214ENST00000525211 ZNF219Q9P2Y4 722 aaPredicted RBP9.85□□□□□ -0.83
CD44-214ENST00000525211 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
CD44-214ENST00000525211 NAIPQ13075 1403 aa9.84□□□□□ -0.83
CD44-214ENST00000525211 TRIM26Q12899 539 aaPredicted RBP9.84□□□□□ -0.83
CD44-214ENST00000525211 RNF39Q9H2S5 420 aa9.84□□□□□ -0.83
CD44-214ENST00000525211 ROCK1Q13464 1354 aa9.84□□□□□ -0.83
CD44-214ENST00000525211 PLXNC1O60486 1568 aa9.84□□□□□ -0.83
CD44-214ENST00000525211 MLECQ14165 292 aa9.83□□□□□ -0.84
CD44-214ENST00000525211 ANKRD30AQ9BXX3 1397 aa9.83□□□□□ -0.84
CD44-214ENST00000525211 KIF3BO15066 747 aa9.81□□□□□ -0.84
CD44-214ENST00000525211 PCGF6Q9BYE7 350 aa9.81□□□□□ -0.84
CD44-214ENST00000525211 MROH1Q8NDA8 1641 aa9.81□□□□□ -0.84
CD44-214ENST00000525211 DUOX2Q9NRD8 1548 aa9.81□□□□□ -0.84
CD44-214ENST00000525211 HFM1A2PYH4 1435 aa9.81□□□□□ -0.84
CD44-214ENST00000525211 KDM4FA0A1W2PPD8 638 aa9.8□□□□□ -0.84
CD44-214ENST00000525211 ANKRD50Q9ULJ7 1429 aa9.8□□□□□ -0.84
CD44-214ENST00000525211 ARID4BQ4LE39 1312 aaPredicted RBP9.8□□□□□ -0.84
CD44-214ENST00000525211 REREQ9P2R6 1566 aa9.8□□□□□ -0.84
CD44-214ENST00000525211 AGLP35573 1532 aa9.79□□□□□ -0.84
CD44-214ENST00000525211 GGT6Q6P531 493 aa9.79□□□□□ -0.84
CD44-214ENST00000525211 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
CD44-214ENST00000525211 GCC2Q8IWJ2 1684 aa9.77□□□□□ -0.84
CD44-214ENST00000525211 RAB3GAP2Q9H2M9 1393 aa9.77□□□□□ -0.84
CD44-214ENST00000525211 ERBINQ96RT1 1412 aa9.77□□□□□ -0.85
CD44-214ENST00000525211 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.85
CD44-214ENST00000525211 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
CD44-214ENST00000525211 CEBPAP49715 358 aaPredicted RBP9.75□□□□□ -0.85
CD44-214ENST00000525211 RNF17Q9BXT8 1623 aaKnown RBP9.74□□□□□ -0.85
CD44-214ENST00000525211 ADAMTSL3P82987 1691 aa9.74□□□□□ -0.85
CD44-214ENST00000525211 VWDEQ8N2E2 1590 aa9.74□□□□□ -0.85
CD44-214ENST00000525211 DEPDC5O75140 1603 aa9.74□□□□□ -0.85
CD44-214ENST00000525211 MADDQ8WXG6 1647 aa9.74□□□□□ -0.85
CD44-214ENST00000525211 EIF2AK4Q9P2K8 1649 aaKnown RBP9.74□□□□□ -0.85
CD44-214ENST00000525211 PZPP20742 1482 aa9.73□□□□□ -0.85
CD44-214ENST00000525211 ABCC3O15438 1527 aa9.72□□□□□ -0.85
CD44-214ENST00000525211 PRDM15P57071 1507 aaPredicted RBP9.72□□□□□ -0.85
CD44-214ENST00000525211 UNC13BO14795 1591 aa9.72□□□□□ -0.85
CD44-214ENST00000525211 FBXO31Q5XUX0 539 aaPredicted RBP9.72□□□□□ -0.85
CD44-214ENST00000525211 TRIM52Q96A61 297 aa9.72□□□□□ -0.85
CD44-214ENST00000525211 NUP155O75694 1391 aa9.72□□□□□ -0.85
CD44-214ENST00000525211 CEP152O94986 1710 aa9.71□□□□□ -0.85
CD44-214ENST00000525211 C1QBPQ07021 282 aaKnown RBP9.71□□□□□ -0.86
CD44-214ENST00000525211 CLTCQ00610 1675 aaKnown RBP9.71□□□□□ -0.86
CD44-214ENST00000525211 RIMS1Q86UR5 1692 aaKnown RBP9.71□□□□□ -0.86
CD44-214ENST00000525211 CAPN15O75808 1086 aa9.7□□□□□ -0.86
CD44-214ENST00000525211 KDM5DQ9BY66 1539 aa9.7□□□□□ -0.86
CD44-214ENST00000525211 ZMYM3Q14202 1370 aa9.69□□□□□ -0.86
CD44-214ENST00000525211 FAM135AQ9P2D6 1515 aa9.69□□□□□ -0.86
CD44-214ENST00000525211 WASHC2CQ9Y4E1 1318 aa9.69□□□□□ -0.86
CD44-214ENST00000525211 FER1L4A9Z1Z3 1794 aa9.68□□□□□ -0.86
CD44-214ENST00000525211 NPATQ14207 1427 aa9.68□□□□□ -0.86
CD44-214ENST00000525211 MPHOSPH9Q99550 1183 aa9.68□□□□□ -0.86
CD44-214ENST00000525211 IQGAP3Q86VI3 1631 aa9.67□□□□□ -0.86
CD44-214ENST00000525211 LMTK2Q8IWU2 1503 aa9.67□□□□□ -0.86
CD44-214ENST00000525211 PTPRMP28827 1452 aa9.67□□□□□ -0.86
CD44-214ENST00000525211 PLA2R1Q13018 1463 aa9.67□□□□□ -0.86
CD44-214ENST00000525211 PKD2Q13563 968 aa9.67□□□□□ -0.86
CD44-214ENST00000525211 E9PCH4 1651 aa9.66□□□□□ -0.86
CD44-214ENST00000525211 C3P01024 1663 aa9.66□□□□□ -0.86
CD44-214ENST00000525211 CAMSAP1Q5T5Y3 1602 aa9.66□□□□□ -0.86
CD44-214ENST00000525211 CFAP65Q6ZU64 1925 aaKnown RBP9.66□□□□□ -0.86
CD44-214ENST00000525211 DHX57Q6P158 1386 aaKnown RBP9.65□□□□□ -0.86
CD44-214ENST00000525211 HRCP23327 699 aa9.65□□□□□ -0.86
CD44-214ENST00000525211 POLA2Q14181 598 aa9.65□□□□□ -0.86
CD44-214ENST00000525211 EFCAB6Q5THR3 1501 aa9.65□□□□□ -0.86
CD44-214ENST00000525211 KANK1Q14678 1352 aa9.64□□□□□ -0.87
CD44-214ENST00000525211 UGGT1Q9NYU2 1555 aa9.64□□□□□ -0.87
CD44-214ENST00000525211 MKRN4PQ13434 485 aaPredicted RBP9.64□□□□□ -0.87
CD44-214ENST00000525211 ERVK-7P63135 1459 aa9.64□□□□□ -0.87
CD44-214ENST00000525211 TET3O43151 1660 aa9.64□□□□□ -0.87
CD44-214ENST00000525211 SYNMO15061 1565 aa9.63□□□□□ -0.87
CD44-214ENST00000525211 NOS1P29475 1434 aa9.63□□□□□ -0.87
CD44-214ENST00000525211 ARHGAP31Q2M1Z3 1444 aa9.63□□□□□ -0.87
CD44-214ENST00000525211 CNTLNQ9NXG0 1405 aa9.63□□□□□ -0.87
CD44-214ENST00000525211 MROH2AA6NES4 1674 aa9.62□□□□□ -0.87
CD44-214ENST00000525211 ZC3H13Q5T200 1668 aaKnown RBP9.61□□□□□ -0.87
CD44-214ENST00000525211 ESF1Q9H501 851 aaKnown RBP9.61□□□□□ -0.87
CD44-214ENST00000525211 PTPRTO14522 1441 aa9.61□□□□□ -0.87
CD44-214ENST00000525211 PREX1Q8TCU6 1659 aa9.61□□□□□ -0.87
CD44-214ENST00000525211 SPATA31D1Q6ZQQ2 1576 aa9.6□□□□□ -0.87
CD44-214ENST00000525211 IDI1Q13907 227 aa9.6□□□□□ -0.87
CD44-214ENST00000525211 SIN3AQ96ST3 1273 aa9.6□□□□□ -0.87
CD44-214ENST00000525211 TNRQ92752 1358 aa9.6□□□□□ -0.87
CD44-214ENST00000525211 ANKRD30BQ9BXX2 1392 aa9.6□□□□□ -0.87
CD44-214ENST00000525211 CLTCL1P53675 1640 aa9.58□□□□□ -0.88
CD44-214ENST00000525211 RPRD2Q5VT52 1461 aaKnown RBP9.57□□□□□ -0.88
CD44-214ENST00000525211 SPHKAPQ2M3C7 1700 aa9.56□□□□□ -0.88
CD44-214ENST00000525211 ABCB7O75027 752 aa9.56□□□□□ -0.88
CD44-214ENST00000525211 HSPA2P54652 639 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms