RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 SHANK2Q9UPX8 1470 aa14.91□□□□□ -0.02
SF3B2-204ENST00000525207 GGT6Q6P531 493 aa14.9□□□□□ -0.02
SF3B2-204ENST00000525207 DNMT1P26358 1616 aaKnown RBP14.9□□□□□ -0.02
SF3B2-204ENST00000525207 NCOA1Q15788 1441 aa14.9□□□□□ -0.02
SF3B2-204ENST00000525207 MROH1Q8NDA8 1641 aa14.89□□□□□ -0.03
SF3B2-204ENST00000525207 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
SF3B2-204ENST00000525207 TCOF1Q13428 1488 aaKnown RBP14.89□□□□□ -0.03
SF3B2-204ENST00000525207 CAMSAP1Q5T5Y3 1602 aa14.88□□□□□ -0.03
SF3B2-204ENST00000525207 PZPP20742 1482 aa14.88□□□□□ -0.03
SF3B2-204ENST00000525207 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
SF3B2-204ENST00000525207 PTPRTO14522 1441 aa14.86□□□□□ -0.03
SF3B2-204ENST00000525207 PLA2R1Q13018 1463 aa14.86□□□□□ -0.03
SF3B2-204ENST00000525207 ABCC3O15438 1527 aa14.86□□□□□ -0.03
SF3B2-204ENST00000525207 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
SF3B2-204ENST00000525207 KIF3BO15066 747 aa14.85□□□□□ -0.03
SF3B2-204ENST00000525207 TSPY4P0CV99 314 aa14.85□□□□□ -0.03
SF3B2-204ENST00000525207 TSPY10P0CW01 314 aa14.85□□□□□ -0.03
SF3B2-204ENST00000525207 APLP2Q06481 763 aa14.85□□□□□ -0.03
SF3B2-204ENST00000525207 CEP152O94986 1710 aa14.85□□□□□ -0.03
SF3B2-204ENST00000525207 PRDM15P57071 1507 aaPredicted RBP14.85□□□□□ -0.03
SF3B2-204ENST00000525207 FBXO41Q8TF61 875 aa14.84□□□□□ -0.03
SF3B2-204ENST00000525207 ABCC5O15440 1437 aa14.83□□□□□ -0.03
SF3B2-204ENST00000525207 DAPK1P53355 1430 aa14.83□□□□□ -0.03
SF3B2-204ENST00000525207 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.03
SF3B2-204ENST00000525207 DEPDC5O75140 1603 aa14.83□□□□□ -0.04
SF3B2-204ENST00000525207 POLR1AO95602 1720 aaPredicted RBP14.83□□□□□ -0.04
SF3B2-204ENST00000525207 ERBINQ96RT1 1412 aa14.82□□□□□ -0.04
SF3B2-204ENST00000525207 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
SF3B2-204ENST00000525207 KIF15Q9NS87 1388 aa14.81□□□□□ -0.04
SF3B2-204ENST00000525207 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
SF3B2-204ENST00000525207 TNRQ92752 1358 aa14.8□□□□□ -0.04
SF3B2-204ENST00000525207 LTBP4Q8N2S1 1624 aa14.79□□□□□ -0.04
SF3B2-204ENST00000525207 NLRP1Q9C000 1473 aa14.78□□□□□ -0.04
SF3B2-204ENST00000525207 WASHC2CQ9Y4E1 1318 aa14.78□□□□□ -0.04
SF3B2-204ENST00000525207 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.04
SF3B2-204ENST00000525207 CERKQ8TCT0 537 aa14.77□□□□□ -0.05
SF3B2-204ENST00000525207 ADGRL2O95490 1459 aa14.76□□□□□ -0.05
SF3B2-204ENST00000525207 ERVK-7P63135 1459 aa14.76□□□□□ -0.05
SF3B2-204ENST00000525207 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
SF3B2-204ENST00000525207 VWDEQ8N2E2 1590 aa14.74□□□□□ -0.05
SF3B2-204ENST00000525207 FBXO31Q5XUX0 539 aaPredicted RBP14.74□□□□□ -0.05
SF3B2-204ENST00000525207 IQSEC2Q5JU85 1478 aa14.74□□□□□ -0.05
SF3B2-204ENST00000525207 ADRA2BP18089 450 aa14.72□□□□□ -0.05
SF3B2-204ENST00000525207 PKD2Q13563 968 aa14.72□□□□□ -0.05
SF3B2-204ENST00000525207 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
SF3B2-204ENST00000525207 ANKRD30AQ9BXX3 1397 aa14.72□□□□□ -0.05
SF3B2-204ENST00000525207 LMTK2Q8IWU2 1503 aa14.71□□□□□ -0.05
SF3B2-204ENST00000525207 NCKAP5LQ9HCH0 1330 aa14.71□□□□□ -0.05
SF3B2-204ENST00000525207 ARHGAP31Q2M1Z3 1444 aa14.71□□□□□ -0.05
SF3B2-204ENST00000525207 CFAP65Q6ZU64 1925 aaKnown RBP14.7□□□□□ -0.06
SF3B2-204ENST00000525207 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
SF3B2-204ENST00000525207 EFCAB6Q5THR3 1501 aa14.69□□□□□ -0.06
SF3B2-204ENST00000525207 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
SF3B2-204ENST00000525207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.67□□□□□ -0.06
SF3B2-204ENST00000525207 MED14O60244 1454 aa14.67□□□□□ -0.06
SF3B2-204ENST00000525207 KDM5AP29375 1690 aaKnown RBP14.66□□□□□ -0.06
SF3B2-204ENST00000525207 UNC13BO14795 1591 aa14.66□□□□□ -0.06
SF3B2-204ENST00000525207 PIK3C2BO00750 1634 aa14.66□□□□□ -0.06
SF3B2-204ENST00000525207 ZNF335Q9H4Z2 1342 aaPredicted RBP14.66□□□□□ -0.06
SF3B2-204ENST00000525207 KANK1Q14678 1352 aa14.65□□□□□ -0.06
SF3B2-204ENST00000525207 FAM50AQ14320 339 aaKnown RBP14.65□□□□□ -0.06
SF3B2-204ENST00000525207 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
SF3B2-204ENST00000525207 SYNMO15061 1565 aa14.64□□□□□ -0.07
SF3B2-204ENST00000525207 ANKRD50Q9ULJ7 1429 aa14.64□□□□□ -0.07
SF3B2-204ENST00000525207 TET3O43151 1660 aa14.64□□□□□ -0.07
SF3B2-204ENST00000525207 SLIT1O75093 1534 aa14.63□□□□□ -0.07
SF3B2-204ENST00000525207 GCC2Q8IWJ2 1684 aa14.63□□□□□ -0.07
SF3B2-204ENST00000525207 NPHP4O75161 1426 aaPredicted RBP14.63□□□□□ -0.07
SF3B2-204ENST00000525207 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
SF3B2-204ENST00000525207 CPS1P31327 1500 aa14.62□□□□□ -0.07
SF3B2-204ENST00000525207 THEMISQ8N1K5 641 aaPredicted RBP14.62□□□□□ -0.07
SF3B2-204ENST00000525207 ROCK1Q13464 1354 aa14.6□□□□□ -0.07
SF3B2-204ENST00000525207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.075e-16■■□□□ 11.7
SF3B2-204ENST00000525207 RPRD2Q5VT52 1461 aaKnown RBP14.6□□□□□ -0.07
SF3B2-204ENST00000525207 SCAF11Q99590 1463 aaKnown RBP14.6□□□□□ -0.07
SF3B2-204ENST00000525207 ADGRB3O60242 1522 aa14.6□□□□□ -0.07
SF3B2-204ENST00000525207 IQGAP3Q86VI3 1631 aa14.59□□□□□ -0.07
SF3B2-204ENST00000525207 NOS1P29475 1434 aa14.59□□□□□ -0.07
SF3B2-204ENST00000525207 ANKLE2Q86XL3 938 aa14.59□□□□□ -0.07
SF3B2-204ENST00000525207 STRCP1A6NGW2 1772 aa14.59□□□□□ -0.07
SF3B2-204ENST00000525207 E9PCH4 1651 aa14.56□□□□□ -0.08
SF3B2-204ENST00000525207 MYO5BQ9ULV0 1848 aa14.55□□□□□ -0.08
SF3B2-204ENST00000525207 RRBP1Q9P2E9 1410 aaKnown RBP14.54□□□□□ -0.08
SF3B2-204ENST00000525207 TMEM2Q9UHN6 1383 aa14.53□□□□□ -0.08
SF3B2-204ENST00000525207 TMEM131LA2VDJ0 1609 aa14.51□□□□□ -0.09
SF3B2-204ENST00000525207 ALKQ9UM73 1620 aa14.51□□□□□ -0.09
SF3B2-204ENST00000525207 LTKP29376 864 aa14.49□□□□□ -0.09
SF3B2-204ENST00000525207 PPARGC1BQ86YN6 1023 aaKnown RBP14.49□□□□□ -0.09
SF3B2-204ENST00000525207 XIRP1Q702N8 1843 aaKnown RBP14.49□□□□□ -0.09
SF3B2-204ENST00000525207 LRRC7Q96NW7 1537 aa14.49□□□□□ -0.09
SF3B2-204ENST00000525207 UBAP1LF5GYI3 381 aa14.48□□□□□ -0.09
SF3B2-204ENST00000525207 IDI1Q13907 227 aa14.48□□□□□ -0.09
SF3B2-204ENST00000525207 SPHKAPQ2M3C7 1700 aa14.48□□□□□ -0.09
SF3B2-204ENST00000525207 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
SF3B2-204ENST00000525207 ZFYVE9O95405 1425 aa14.47□□□□□ -0.09
SF3B2-204ENST00000525207 TXNDC2Q86VQ3 553 aa14.46□□□□□ -0.09
SF3B2-204ENST00000525207 SLC52A1Q9NWF4 448 aa14.46□□□□□ -0.09
SF3B2-204ENST00000525207 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
SF3B2-204ENST00000525207 EID1Q9Y6B2 187 aa14.46□□□□□ -0.09
SF3B2-204ENST00000525207 ITGAEP38570 1179 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms