RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 WASHC2CQ9Y4E1 1318 aa17.34■□□□□ 0.37
TRIM3-203ENST00000525074 KIF14Q15058 1648 aa17.33■□□□□ 0.36
TRIM3-203ENST00000525074 NBPF1Q3BBV0 1214 aa17.33■□□□□ 0.36
TRIM3-203ENST00000525074 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.36
TRIM3-203ENST00000525074 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
TRIM3-203ENST00000525074 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
TRIM3-203ENST00000525074 MS4A1P11836 297 aa17.32■□□□□ 0.36
TRIM3-203ENST00000525074 KIAA0586Q9BVV6 1533 aa17.32■□□□□ 0.36
TRIM3-203ENST00000525074 GPATCH8Q9UKJ3 1502 aaKnown RBP17.32■□□□□ 0.36
TRIM3-203ENST00000525074 ROCK1Q13464 1354 aa17.31■□□□□ 0.36
TRIM3-203ENST00000525074 KIAA0556O60303 1618 aa17.31■□□□□ 0.36
TRIM3-203ENST00000525074 RGS3P49796 1198 aa17.31■□□□□ 0.36
TRIM3-203ENST00000525074 ERCC6Q03468 1493 aa17.3■□□□□ 0.36
TRIM3-203ENST00000525074 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
TRIM3-203ENST00000525074 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
TRIM3-203ENST00000525074 BRD4O60885 1362 aaPredicted RBP17.3■□□□□ 0.36
TRIM3-203ENST00000525074 TROQ12816 1431 aaPredicted RBP17.29■□□□□ 0.36
TRIM3-203ENST00000525074 RALBP1Q15311 655 aa17.29■□□□□ 0.36
TRIM3-203ENST00000525074 DDRGK1Q96HY6 314 aa17.29■□□□□ 0.36
TRIM3-203ENST00000525074 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
TRIM3-203ENST00000525074 FRAT2O75474 233 aaPredicted RBP17.28■□□□□ 0.36
TRIM3-203ENST00000525074 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
TRIM3-203ENST00000525074 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
TRIM3-203ENST00000525074 ANKRD30AQ9BXX3 1397 aa17.27■□□□□ 0.36
TRIM3-203ENST00000525074 POLR1AO95602 1720 aaPredicted RBP17.27■□□□□ 0.36
TRIM3-203ENST00000525074 RAPGEF6Q8TEU7 1601 aa17.27■□□□□ 0.36
TRIM3-203ENST00000525074 ROCK2O75116 1388 aaKnown RBP17.25■□□□□ 0.35
TRIM3-203ENST00000525074 KDM5CP41229 1560 aa17.24■□□□□ 0.35
TRIM3-203ENST00000525074 ARXQ96QS3 562 aa17.24■□□□□ 0.35
TRIM3-203ENST00000525074 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
TRIM3-203ENST00000525074 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
TRIM3-203ENST00000525074 MBD5Q9P267 1494 aa17.23■□□□□ 0.35
TRIM3-203ENST00000525074 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
TRIM3-203ENST00000525074 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
TRIM3-203ENST00000525074 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
TRIM3-203ENST00000525074 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
TRIM3-203ENST00000525074 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
TRIM3-203ENST00000525074 C8orf34Q49A92 452 aa17.17■□□□□ 0.34
TRIM3-203ENST00000525074 PANK3Q9H999 370 aa17.17■□□□□ 0.34
TRIM3-203ENST00000525074 ADAMTS8Q9UP79 889 aa17.17■□□□□ 0.34
TRIM3-203ENST00000525074 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
TRIM3-203ENST00000525074 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
TRIM3-203ENST00000525074 ATP10BO94823 1461 aa17.15■□□□□ 0.34
TRIM3-203ENST00000525074 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
TRIM3-203ENST00000525074 CARMIL2Q6F5E8 1435 aa17.15■□□□□ 0.34
TRIM3-203ENST00000525074 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
TRIM3-203ENST00000525074 PARD3Q8TEW0 1356 aa17.14■□□□□ 0.33
TRIM3-203ENST00000525074 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
TRIM3-203ENST00000525074 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
TRIM3-203ENST00000525074 CENPQQ7L2Z9 268 aaPredicted RBP17.12■□□□□ 0.33
TRIM3-203ENST00000525074 POGKQ9P215 609 aa17.12■□□□□ 0.33
TRIM3-203ENST00000525074 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
TRIM3-203ENST00000525074 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
TRIM3-203ENST00000525074 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
TRIM3-203ENST00000525074 DISP3Q9P2K9 1392 aa17.09■□□□□ 0.33
TRIM3-203ENST00000525074 UBE2Q2Q8WVN8 375 aa17.09■□□□□ 0.33
TRIM3-203ENST00000525074 UHRF1BP1Q6BDS2 1440 aa17.08■□□□□ 0.32
TRIM3-203ENST00000525074 PTPRGP23470 1445 aa17.07■□□□□ 0.32
TRIM3-203ENST00000525074 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
TRIM3-203ENST00000525074 WDR43Q15061 677 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRIM3-203ENST00000525074 DUSP27Q5VZP5 1158 aa17.07■□□□□ 0.32
TRIM3-203ENST00000525074 BCAR3O75815 825 aa17.06■□□□□ 0.32
TRIM3-203ENST00000525074 SEC24BO95487 1268 aa17.06■□□□□ 0.32
TRIM3-203ENST00000525074 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
TRIM3-203ENST00000525074 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
TRIM3-203ENST00000525074 SPINK5Q9NQ38 1064 aaPredicted RBP17.04■□□□□ 0.32
TRIM3-203ENST00000525074 ADGRL2O95490 1459 aa17.03■□□□□ 0.32
TRIM3-203ENST00000525074 GOLGA2Q08379 1002 aa17.02■□□□□ 0.32
TRIM3-203ENST00000525074 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.32
TRIM3-203ENST00000525074 ABCC10Q5T3U5 1492 aa17.02■□□□□ 0.32
TRIM3-203ENST00000525074 IGHDP01880 384 aa17.02■□□□□ 0.32
TRIM3-203ENST00000525074 TESK2Q96S53 571 aa17.01■□□□□ 0.31
TRIM3-203ENST00000525074 BLMP54132 1417 aaPredicted RBP17.01■□□□□ 0.31
TRIM3-203ENST00000525074 ITSN2Q9NZM3 1697 aa17.01■□□□□ 0.31
TRIM3-203ENST00000525074 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
TRIM3-203ENST00000525074 AFAP1Q8N556 730 aa17■□□□□ 0.31
TRIM3-203ENST00000525074 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
TRIM3-203ENST00000525074 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
TRIM3-203ENST00000525074 GZF1Q9H116 711 aaPredicted RBP16.99■□□□□ 0.31
TRIM3-203ENST00000525074 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
TRIM3-203ENST00000525074 FAM43AQ8N2R8 423 aa16.99■□□□□ 0.31
TRIM3-203ENST00000525074 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
TRIM3-203ENST00000525074 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
TRIM3-203ENST00000525074 APAF1O14727 1248 aa16.98■□□□□ 0.31
TRIM3-203ENST00000525074 TMF1P82094 1093 aa16.98■□□□□ 0.31
TRIM3-203ENST00000525074 FAM135AQ9P2D6 1515 aa16.97■□□□□ 0.31
TRIM3-203ENST00000525074 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
TRIM3-203ENST00000525074 NUP160Q12769 1436 aa16.97■□□□□ 0.31
TRIM3-203ENST00000525074 CANXP27824 592 aaKnown RBP16.96■□□□□ 0.31
TRIM3-203ENST00000525074 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
TRIM3-203ENST00000525074 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
TRIM3-203ENST00000525074 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.31
TRIM3-203ENST00000525074 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
TRIM3-203ENST00000525074 E9PCH4 1651 aa16.96■□□□□ 0.31
TRIM3-203ENST00000525074 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
TRIM3-203ENST00000525074 PANK1Q8TE04 598 aa16.96■□□□□ 0.31
TRIM3-203ENST00000525074 USP19O94966 1318 aa16.96■□□□□ 0.31
TRIM3-203ENST00000525074 ZMYM4Q5VZL5 1548 aa16.96■□□□□ 0.31
TRIM3-203ENST00000525074 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.3
TRIM3-203ENST00000525074 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms