RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 PRDM15P57071 1507 aaPredicted RBP12.25□□□□□ -0.45
PKP3-202ENST00000524646 ABCC1P33527 1531 aa12.23□□□□□ -0.45
PKP3-202ENST00000524646 DUOX2Q9NRD8 1548 aa12.23□□□□□ -0.45
PKP3-202ENST00000524646 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
PKP3-202ENST00000524646 CEP152O94986 1710 aa12.23□□□□□ -0.45
PKP3-202ENST00000524646 SPHKAPQ2M3C7 1700 aa12.22□□□□□ -0.45
PKP3-202ENST00000524646 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.45
PKP3-202ENST00000524646 KTN1Q86UP2 1357 aaKnown RBP12.21□□□□□ -0.45
PKP3-202ENST00000524646 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
PKP3-202ENST00000524646 IQGAP1P46940 1657 aa12.21□□□□□ -0.45
PKP3-202ENST00000524646 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.46
PKP3-202ENST00000524646 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.46
PKP3-202ENST00000524646 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
PKP3-202ENST00000524646 ERCC6L2Q5T890 1561 aa12.2□□□□□ -0.46
PKP3-202ENST00000524646 A2MP01023 1474 aa12.2□□□□□ -0.46
PKP3-202ENST00000524646 CCDC144AA2RUR9 1427 aa12.2□□□□□ -0.46
PKP3-202ENST00000524646 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
PKP3-202ENST00000524646 DEPDC5O75140 1603 aa12.19□□□□□ -0.46
PKP3-202ENST00000524646 TSPY4P0CV99 314 aa12.19□□□□□ -0.46
PKP3-202ENST00000524646 TSPY10P0CW01 314 aa12.19□□□□□ -0.46
PKP3-202ENST00000524646 ZNF326Q5BKZ1 582 aaKnown RBP12.19□□□□□ -0.46
PKP3-202ENST00000524646 PPP4R2Q9NY27 417 aa12.19□□□□□ -0.46
PKP3-202ENST00000524646 RBM19Q9Y4C8 960 aaKnown RBP12.19□□□□□ -0.46
PKP3-202ENST00000524646 ATP10AO60312 1499 aa12.19□□□□□ -0.46
PKP3-202ENST00000524646 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
PKP3-202ENST00000524646 ARAP3Q8WWN8 1544 aa12.18□□□□□ -0.46
PKP3-202ENST00000524646 MADDQ8WXG6 1647 aa12.18□□□□□ -0.46
PKP3-202ENST00000524646 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
PKP3-202ENST00000524646 IRX6P78412 446 aaPredicted RBP12.17□□□□□ -0.46
PKP3-202ENST00000524646 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
PKP3-202ENST00000524646 CARD11Q9BXL7 1154 aa12.16□□□□□ -0.46
PKP3-202ENST00000524646 BRD4O60885 1362 aaPredicted RBP12.16□□□□□ -0.46
PKP3-202ENST00000524646 LRPPRCP42704 1394 aaKnown RBP12.16□□□□□ -0.46
PKP3-202ENST00000524646 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
PKP3-202ENST00000524646 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
PKP3-202ENST00000524646 TET3O43151 1660 aa12.16□□□□□ -0.46
PKP3-202ENST00000524646 PLA2R1Q13018 1463 aa12.15□□□□□ -0.46
PKP3-202ENST00000524646 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
PKP3-202ENST00000524646 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
PKP3-202ENST00000524646 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
PKP3-202ENST00000524646 TRPM2O94759 1503 aa12.14□□□□□ -0.47
PKP3-202ENST00000524646 ABCA9Q8IUA7 1624 aa12.13□□□□□ -0.47
PKP3-202ENST00000524646 NUDCQ9Y266 331 aa12.13□□□□□ -0.47
PKP3-202ENST00000524646 FANCIQ9NVI1 1328 aa12.12□□□□□ -0.47
PKP3-202ENST00000524646 POLR3GLQ9BT43 218 aa12.12□□□□□ -0.47
PKP3-202ENST00000524646 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
PKP3-202ENST00000524646 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
PKP3-202ENST00000524646 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
PKP3-202ENST00000524646 CLTCL1P53675 1640 aa12.11□□□□□ -0.47
PKP3-202ENST00000524646 MYOM1P52179 1685 aa12.1□□□□□ -0.47
PKP3-202ENST00000524646 SYNMO15061 1565 aa12.1□□□□□ -0.47
PKP3-202ENST00000524646 NEURL4Q96JN8 1562 aa12.1□□□□□ -0.47
PKP3-202ENST00000524646 IFT172Q9UG01 1749 aa12.1□□□□□ -0.47
PKP3-202ENST00000524646 PLCH2O75038 1416 aa12.1□□□□□ -0.47
PKP3-202ENST00000524646 RALBP1Q15311 655 aa12.09□□□□□ -0.47
PKP3-202ENST00000524646 INSRP06213 1382 aa12.08□□□□□ -0.48
PKP3-202ENST00000524646 ST20-MTHFSA0A0A6YYL1 179 aa12.08□□□□□ -0.48
PKP3-202ENST00000524646 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
PKP3-202ENST00000524646 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
PKP3-202ENST00000524646 KDM5AP29375 1690 aaKnown RBP12.07□□□□□ -0.48
PKP3-202ENST00000524646 BLMP54132 1417 aaPredicted RBP12.07□□□□□ -0.48
PKP3-202ENST00000524646 PNISRQ8TF01 805 aaKnown RBP12.07□□□□□ -0.48
PKP3-202ENST00000524646 KIF1BO60333 1816 aa12.07□□□□□ -0.48
PKP3-202ENST00000524646 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
PKP3-202ENST00000524646 KDM2AQ9Y2K7 1162 aa12.06□□□□□ -0.48
PKP3-202ENST00000524646 RTEL1-TNFRSF6BF6WH68 1400 aa12.05□□□□□ -0.48
PKP3-202ENST00000524646 MROH1Q8NDA8 1641 aa12.05□□□□□ -0.48
PKP3-202ENST00000524646 TMC1Q8TDI8 760 aa12.05□□□□□ -0.48
PKP3-202ENST00000524646 DISP3Q9P2K9 1392 aa12.05□□□□□ -0.48
PKP3-202ENST00000524646 B4GALNT3Q6L9W6 998 aa12.04□□□□□ -0.48
PKP3-202ENST00000524646 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
PKP3-202ENST00000524646 TRAPPC8Q9Y2L5 1435 aa12.03□□□□□ -0.48
PKP3-202ENST00000524646 WDR7Q9Y4E6 1490 aa12.03□□□□□ -0.48
PKP3-202ENST00000524646 NLRP13Q86W25 1043 aa12.03□□□□□ -0.48
PKP3-202ENST00000524646 MYO3AQ8NEV4 1616 aa12.03□□□□□ -0.48
PKP3-202ENST00000524646 MROH2AA6NES4 1674 aa12.03□□□□□ -0.48
PKP3-202ENST00000524646 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.49
PKP3-202ENST00000524646 MAP3K4Q9Y6R4 1608 aa12.01□□□□□ -0.49
PKP3-202ENST00000524646 MSH5O43196 834 aa12.01□□□□□ -0.49
PKP3-202ENST00000524646 WASHC2CQ9Y4E1 1318 aa12.01□□□□□ -0.49
PKP3-202ENST00000524646 PTPRTO14522 1441 aa12.01□□□□□ -0.49
PKP3-202ENST00000524646 SCAPERQ9BY12 1400 aa12.01□□□□□ -0.49
PKP3-202ENST00000524646 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
PKP3-202ENST00000524646 CFAP74Q9C0B2 1584 aa12.01□□□□□ -0.49
PKP3-202ENST00000524646 CNGB1Q14028 1251 aaPredicted RBP12□□□□□ -0.49
PKP3-202ENST00000524646 MYOM2P54296 1465 aa12□□□□□ -0.49
PKP3-202ENST00000524646 EFCAB2Q5VUJ9 269 aa11.99□□□□□ -0.49
PKP3-202ENST00000524646 SCAF11Q99590 1463 aaKnown RBP11.99□□□□□ -0.49
PKP3-202ENST00000524646 PPRC1Q5VV67 1664 aaKnown RBP11.99□□□□□ -0.49
PKP3-202ENST00000524646 TESK2Q96S53 571 aa11.98□□□□□ -0.49
PKP3-202ENST00000524646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.49
PKP3-202ENST00000524646 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
PKP3-202ENST00000524646 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
PKP3-202ENST00000524646 NBPF1Q3BBV0 1214 aa11.97□□□□□ -0.49
PKP3-202ENST00000524646 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.49
PKP3-202ENST00000524646 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
PKP3-202ENST00000524646 FANCAO15360 1455 aa11.95□□□□□ -0.5
PKP3-202ENST00000524646 PPLO60437 1756 aa11.95□□□□□ -0.5
PKP3-202ENST00000524646 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
PKP3-202ENST00000524646 RRP1P56182 461 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms