RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 IQGAP2Q13576 1575 aa11.33□□□□□ -0.6
CTR9-202ENST00000524523 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
CTR9-202ENST00000524523 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
CTR9-202ENST00000524523 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
CTR9-202ENST00000524523 FHOD3Q2V2M9 1422 aa11.31□□□□□ -0.6
CTR9-202ENST00000524523 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
CTR9-202ENST00000524523 NUP160Q12769 1436 aa11.29□□□□□ -0.6
CTR9-202ENST00000524523 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
CTR9-202ENST00000524523 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
CTR9-202ENST00000524523 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
CTR9-202ENST00000524523 CCNB3Q8WWL7 1395 aa11.28□□□□□ -0.6
CTR9-202ENST00000524523 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
CTR9-202ENST00000524523 SLAIN1Q8ND83 568 aa11.27□□□□□ -0.61
CTR9-202ENST00000524523 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
CTR9-202ENST00000524523 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
CTR9-202ENST00000524523 CARMIL2Q6F5E8 1435 aa11.25□□□□□ -0.61
CTR9-202ENST00000524523 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
CTR9-202ENST00000524523 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
CTR9-202ENST00000524523 CCER1Q8TC90 406 aaPredicted RBP11.24□□□□□ -0.61
CTR9-202ENST00000524523 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
CTR9-202ENST00000524523 DISP1Q96F81 1524 aa11.22□□□□□ -0.61
CTR9-202ENST00000524523 MTUS2Q5JR59 1369 aa11.21□□□□□ -0.61
CTR9-202ENST00000524523 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.61
CTR9-202ENST00000524523 ACIN1Q9UKV3 1341 aaKnown RBP11.21□□□□□ -0.61
CTR9-202ENST00000524523 PPP1R37O75864 691 aa11.21□□□□□ -0.61
CTR9-202ENST00000524523 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
CTR9-202ENST00000524523 CDK11AQ9UQ88 783 aaPredicted RBP11.21□□□□□ -0.61
CTR9-202ENST00000524523 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
CTR9-202ENST00000524523 ATP1B4Q9UN42 357 aaPredicted RBP11.19□□□□□ -0.62
CTR9-202ENST00000524523 HECW1Q76N89 1606 aa11.19□□□□□ -0.62
CTR9-202ENST00000524523 KIAA0556O60303 1618 aa11.18□□□□□ -0.62
CTR9-202ENST00000524523 CEP170Q5SW79 1584 aa11.18□□□□□ -0.62
CTR9-202ENST00000524523 PHLDB1Q86UU1 1377 aa11.17□□□□□ -0.62
CTR9-202ENST00000524523 EPRSP07814 1512 aaKnown RBP11.17□□□□□ -0.62
CTR9-202ENST00000524523 EHBP1L1Q8N3D4 1523 aa11.17□□□□□ -0.62
CTR9-202ENST00000524523 ARHGEF11O15085 1522 aa11.15□□□□□ -0.62
CTR9-202ENST00000524523 MIA2Q96PC5 1412 aa11.15□□□□□ -0.62
CTR9-202ENST00000524523 SNPHO15079 494 aa11.14□□□□□ -0.63
CTR9-202ENST00000524523 MYOM3Q5VTT5 1437 aa11.14□□□□□ -0.63
CTR9-202ENST00000524523 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
CTR9-202ENST00000524523 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
CTR9-202ENST00000524523 NCOA2Q15596 1464 aa11.12□□□□□ -0.63
CTR9-202ENST00000524523 SUPT6HQ7KZ85 1726 aaKnown RBP11.11□□□□□ -0.63
CTR9-202ENST00000524523 SETD5Q9C0A6 1442 aa11.1□□□□□ -0.63
CTR9-202ENST00000524523 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
CTR9-202ENST00000524523 NUP153P49790 1475 aaKnown RBP11.1□□□□□ -0.63
CTR9-202ENST00000524523 RAPGEF6Q8TEU7 1601 aa11.09□□□□□ -0.63
CTR9-202ENST00000524523 TCOF1Q13428 1488 aaKnown RBP11.09□□□□□ -0.63
CTR9-202ENST00000524523 TMC2Q8TDI7 906 aa11.09□□□□□ -0.63
CTR9-202ENST00000524523 FAM163AQ96GL9 167 aaPredicted RBP11.09□□□□□ -0.63
CTR9-202ENST00000524523 PAXIP1Q6ZW49 1069 aaPredicted RBP11.08□□□□□ -0.64
CTR9-202ENST00000524523 PTPRGP23470 1445 aa11.08□□□□□ -0.64
CTR9-202ENST00000524523 PRG4Q92954 1404 aaPredicted RBP11.08□□□□□ -0.64
CTR9-202ENST00000524523 FAM50AQ14320 339 aaKnown RBP11.07□□□□□ -0.64
CTR9-202ENST00000524523 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
CTR9-202ENST00000524523 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
CTR9-202ENST00000524523 TROQ12816 1431 aaPredicted RBP11.07□□□□□ -0.64
CTR9-202ENST00000524523 ABCA8O94911 1581 aa11.07□□□□□ -0.64
CTR9-202ENST00000524523 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
CTR9-202ENST00000524523 DHX57Q6P158 1386 aaKnown RBP11.06□□□□□ -0.64
CTR9-202ENST00000524523 AKNAQ7Z591 1439 aa11.06□□□□□ -0.64
CTR9-202ENST00000524523 C2orf72A6NCS6 295 aa11.05□□□□□ -0.64
CTR9-202ENST00000524523 PLEKHD1A6NEE1 506 aa11.05□□□□□ -0.64
CTR9-202ENST00000524523 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
CTR9-202ENST00000524523 HFM1A2PYH4 1435 aa11.04□□□□□ -0.64
CTR9-202ENST00000524523 KIF3CO14782 793 aa11.04□□□□□ -0.64
CTR9-202ENST00000524523 MAGI3Q5TCQ9 1506 aa11.04□□□□□ -0.64
CTR9-202ENST00000524523 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
CTR9-202ENST00000524523 PLB1Q6P1J6 1458 aa11.03□□□□□ -0.64
CTR9-202ENST00000524523 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
CTR9-202ENST00000524523 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
CTR9-202ENST00000524523 ROCK1Q13464 1354 aa11.02□□□□□ -0.65
CTR9-202ENST00000524523 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
CTR9-202ENST00000524523 ATP10BO94823 1461 aa11.01□□□□□ -0.65
CTR9-202ENST00000524523 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
CTR9-202ENST00000524523 CLASP1Q7Z460 1538 aa11□□□□□ -0.65
CTR9-202ENST00000524523 PTPN23Q9H3S7 1636 aa11□□□□□ -0.65
CTR9-202ENST00000524523 RSPH4AQ5TD94 716 aa11□□□□□ -0.65
CTR9-202ENST00000524523 UHRF1BP1LA0JNW5 1464 aa11□□□□□ -0.65
CTR9-202ENST00000524523 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
CTR9-202ENST00000524523 PDE4AP27815 886 aa10.99□□□□□ -0.65
CTR9-202ENST00000524523 ZNF710Q8N1W2 664 aa10.99□□□□□ -0.65
CTR9-202ENST00000524523 ADCY10Q96PN6 1610 aa10.98□□□□□ -0.65
CTR9-202ENST00000524523 CHD1O14646 1710 aa10.98□□□□□ -0.65
CTR9-202ENST00000524523 ST18O60284 1047 aa10.98□□□□□ -0.65
CTR9-202ENST00000524523 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
CTR9-202ENST00000524523 ITGAEP38570 1179 aa10.98□□□□□ -0.65
CTR9-202ENST00000524523 GPATCH8Q9UKJ3 1502 aaKnown RBP10.96□□□□□ -0.65
CTR9-202ENST00000524523 NAIPQ13075 1403 aa10.96□□□□□ -0.65
CTR9-202ENST00000524523 FOXK1P85037 733 aa10.96□□□□□ -0.65
CTR9-202ENST00000524523 CRISPLD2Q9H0B8 497 aa10.96□□□□□ -0.65
CTR9-202ENST00000524523 CFDP1Q9UEE9 299 aaPredicted RBP10.96□□□□□ -0.65
CTR9-202ENST00000524523 PTPRKQ15262 1439 aa10.95□□□□□ -0.66
CTR9-202ENST00000524523 ABCC2Q92887 1545 aa10.94□□□□□ -0.66
CTR9-202ENST00000524523 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
CTR9-202ENST00000524523 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
CTR9-202ENST00000524523 NCKAP5LQ9HCH0 1330 aa10.93□□□□□ -0.66
CTR9-202ENST00000524523 DSG2Q14126 1118 aa10.93□□□□□ -0.66
CTR9-202ENST00000524523 PLPP6Q8IY26 295 aa10.93□□□□□ -0.66
CTR9-202ENST00000524523 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms