RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 NUDCQ9Y266 331 aa11.57□□□□□ -0.56
SREK1-215ENST00000524111 NLRP13Q86W25 1043 aa11.57□□□□□ -0.56
SREK1-215ENST00000524111 PZPP20742 1482 aa11.56□□□□□ -0.56
SREK1-215ENST00000524111 PLEKHH2Q8IVE3 1493 aa11.56□□□□□ -0.56
SREK1-215ENST00000524111 KANK1Q14678 1352 aa11.56□□□□□ -0.56
SREK1-215ENST00000524111 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
SREK1-215ENST00000524111 RALBP1Q15311 655 aa11.55□□□□□ -0.56
SREK1-215ENST00000524111 DENND4BO75064 1496 aaPredicted RBP11.55□□□□□ -0.56
SREK1-215ENST00000524111 NUP160Q12769 1436 aa11.55□□□□□ -0.56
SREK1-215ENST00000524111 CYB5RLQ6IPT4 315 aa11.55□□□□□ -0.56
SREK1-215ENST00000524111 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
SREK1-215ENST00000524111 NBR1Q14596 966 aa11.55□□□□□ -0.56
SREK1-215ENST00000524111 CFAP70Q5T0N1 1121 aa11.55□□□□□ -0.56
SREK1-215ENST00000524111 SCAPERQ9BY12 1400 aa11.54□□□□□ -0.56
SREK1-215ENST00000524111 CCDC141Q6ZP82 1450 aa11.54□□□□□ -0.56
SREK1-215ENST00000524111 PNISRQ8TF01 805 aaKnown RBP11.53□□□□□ -0.56
SREK1-215ENST00000524111 RCAN3Q9UKA8 241 aa11.53□□□□□ -0.56
SREK1-215ENST00000524111 MYT1Q01538 1121 aa11.53□□□□□ -0.56
SREK1-215ENST00000524111 TMEM132EQ6IEE7 984 aa11.53□□□□□ -0.56
SREK1-215ENST00000524111 WASHC2CQ9Y4E1 1318 aa11.53□□□□□ -0.56
SREK1-215ENST00000524111 CDCA8Q53HL2 280 aa11.52□□□□□ -0.57
SREK1-215ENST00000524111 ANP32AP39687 249 aaKnown RBP11.51□□□□□ -0.57
SREK1-215ENST00000524111 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
SREK1-215ENST00000524111 DNMT1P26358 1616 aaKnown RBP11.51□□□□□ -0.57
SREK1-215ENST00000524111 PPM1GO15355 546 aaPredicted RBP11.51□□□□□ -0.57
SREK1-215ENST00000524111 TEX14Q8IWB6 1497 aa11.51□□□□□ -0.57
SREK1-215ENST00000524111 RAPGEF3O95398 923 aa11.5□□□□□ -0.57
SREK1-215ENST00000524111 ANP32EQ9BTT0 268 aa11.5□□□□□ -0.57
SREK1-215ENST00000524111 EXOC6Q8TAG9 804 aa11.5□□□□□ -0.57
SREK1-215ENST00000524111 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
SREK1-215ENST00000524111 SYCP2Q9BX26 1530 aa11.5□□□□□ -0.57
SREK1-215ENST00000524111 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
SREK1-215ENST00000524111 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
SREK1-215ENST00000524111 ADAMTS8Q9UP79 889 aa11.47□□□□□ -0.57
SREK1-215ENST00000524111 SRPK2P78362 688 aaKnown RBP11.47□□□□□ -0.57
SREK1-215ENST00000524111 MORC1Q86VD1 984 aa11.46□□□□□ -0.57
SREK1-215ENST00000524111 FRAT1Q92837 279 aaPredicted RBP11.46□□□□□ -0.57
SREK1-215ENST00000524111 TRAPPC8Q9Y2L5 1435 aa11.46□□□□□ -0.57
SREK1-215ENST00000524111 RGS3P49796 1198 aa11.46□□□□□ -0.58
SREK1-215ENST00000524111 POGKQ9P215 609 aa11.46□□□□□ -0.58
SREK1-215ENST00000524111 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
SREK1-215ENST00000524111 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
SREK1-215ENST00000524111 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
SREK1-215ENST00000524111 APAF1O14727 1248 aa11.44□□□□□ -0.58
SREK1-215ENST00000524111 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
SREK1-215ENST00000524111 ARID4BQ4LE39 1312 aaPredicted RBP11.44□□□□□ -0.58
SREK1-215ENST00000524111 SKAP1Q86WV1 359 aa11.44□□□□□ -0.58
SREK1-215ENST00000524111 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
SREK1-215ENST00000524111 ITSN2Q9NZM3 1697 aa11.43□□□□□ -0.58
SREK1-215ENST00000524111 RRP1P56182 461 aaKnown RBP11.43□□□□□ -0.58
SREK1-215ENST00000524111 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
SREK1-215ENST00000524111 ERCC6L2Q5T890 1561 aa11.43□□□□□ -0.58
SREK1-215ENST00000524111 DHX29Q7Z478 1369 aaKnown RBP11.43□□□□□ -0.58
SREK1-215ENST00000524111 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
SREK1-215ENST00000524111 SPATA31E1Q6ZUB1 1445 aa11.42□□□□□ -0.58
SREK1-215ENST00000524111 FAM135AQ9P2D6 1515 aa11.42□□□□□ -0.58
SREK1-215ENST00000524111 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
SREK1-215ENST00000524111 SLC12A5Q9H2X9 1139 aa11.41□□□□□ -0.58
SREK1-215ENST00000524111 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
SREK1-215ENST00000524111 MBD5Q9P267 1494 aa11.41□□□□□ -0.58
SREK1-215ENST00000524111 ERBINQ96RT1 1412 aa11.41□□□□□ -0.58
SREK1-215ENST00000524111 BRD4O60885 1362 aaPredicted RBP11.41□□□□□ -0.58
SREK1-215ENST00000524111 BCL2L13Q9BXK5 485 aa11.4□□□□□ -0.58
SREK1-215ENST00000524111 PPP2R1AP30153 589 aa11.4□□□□□ -0.58
SREK1-215ENST00000524111 CRBNQ96SW2 442 aa11.4□□□□□ -0.58
SREK1-215ENST00000524111 SOX12O15370 315 aa11.4□□□□□ -0.58
SREK1-215ENST00000524111 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.58
SREK1-215ENST00000524111 TESK2Q96S53 571 aa11.4□□□□□ -0.58
SREK1-215ENST00000524111 ERICH6BQ5W0A0 696 aa11.4□□□□□ -0.59
SREK1-215ENST00000524111 ADGRL2O95490 1459 aa11.39□□□□□ -0.59
SREK1-215ENST00000524111 MINK1Q8N4C8 1332 aaPredicted RBP11.39□□□□□ -0.59
SREK1-215ENST00000524111 U2AF1L5P0DN76 240 aaPredicted RBP11.39□□□□□ -0.59
SREK1-215ENST00000524111 U2AF1Q01081 240 aaKnown RBP eCLIP11.39□□□□□ -0.594e-10■■■□□ 18
SREK1-215ENST00000524111 NUTM2FA1L443 756 aa11.39□□□□□ -0.59
SREK1-215ENST00000524111 SLC24A1O60721 1099 aa11.39□□□□□ -0.59
SREK1-215ENST00000524111 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
SREK1-215ENST00000524111 ABCA8O94911 1581 aa11.39□□□□□ -0.59
SREK1-215ENST00000524111 PLCH2O75038 1416 aa11.38□□□□□ -0.59
SREK1-215ENST00000524111 LAS1LQ9Y4W2 734 aaKnown RBP11.38□□□□□ -0.59
SREK1-215ENST00000524111 CLUAP1Q96AJ1 413 aa11.38□□□□□ -0.59
SREK1-215ENST00000524111 PRAG1Q86YV5 1406 aa11.38□□□□□ -0.59
SREK1-215ENST00000524111 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
SREK1-215ENST00000524111 RALGAPBQ86X10 1494 aa11.38□□□□□ -0.59
SREK1-215ENST00000524111 EIF3AQ14152 1382 aaKnown RBP11.37□□□□□ -0.59
SREK1-215ENST00000524111 FAM69CQ0P6D2 419 aa11.37□□□□□ -0.59
SREK1-215ENST00000524111 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
SREK1-215ENST00000524111 CENPJQ9HC77 1338 aaPredicted RBP11.37□□□□□ -0.59
SREK1-215ENST00000524111 FANCAO15360 1455 aa11.36□□□□□ -0.59
SREK1-215ENST00000524111 ADGRL1O94910 1474 aa11.36□□□□□ -0.59
SREK1-215ENST00000524111 NEFMP07197 916 aa11.36□□□□□ -0.59
SREK1-215ENST00000524111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.36□□□□□ -0.59
SREK1-215ENST00000524111 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
SREK1-215ENST00000524111 A2MP01023 1474 aa11.34□□□□□ -0.59
SREK1-215ENST00000524111 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
SREK1-215ENST00000524111 SHANK2Q9UPX8 1470 aa11.34□□□□□ -0.59
SREK1-215ENST00000524111 C20orf194Q5TEA3 1177 aa11.34□□□□□ -0.59
SREK1-215ENST00000524111 NOP58Q9Y2X3 529 aaKnown RBP11.34□□□□□ -0.59
SREK1-215ENST00000524111 SMG6Q86US8 1419 aaKnown RBP11.34□□□□□ -0.59
SREK1-215ENST00000524111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.34□□□□□ -0.59
SREK1-215ENST00000524111 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms