RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 LTBP4Q8N2S1 1624 aa29.7■■■□□ 2.34
PTP4A3-206ENST00000524028 MYOM3Q5VTT5 1437 aa29.68■■■□□ 2.34
PTP4A3-206ENST00000524028 WASHC2CQ9Y4E1 1318 aa29.67■■■□□ 2.34
PTP4A3-206ENST00000524028 PLA2R1Q13018 1463 aa29.67■■■□□ 2.34
PTP4A3-206ENST00000524028 KDM5DQ9BY66 1539 aa29.66■■■□□ 2.34
PTP4A3-206ENST00000524028 MIA2Q96PC5 1412 aa29.66■■■□□ 2.34
PTP4A3-206ENST00000524028 PKD2Q13563 968 aa29.65■■■□□ 2.34
PTP4A3-206ENST00000524028 A2ML1A8K2U0 1454 aa29.64■■■□□ 2.34
PTP4A3-206ENST00000524028 TCOF1Q13428 1488 aaKnown RBP29.64■■■□□ 2.34
PTP4A3-206ENST00000524028 PZPP20742 1482 aa29.63■■■□□ 2.33
PTP4A3-206ENST00000524028 MAST1Q9Y2H9 1570 aa29.63■■■□□ 2.33
PTP4A3-206ENST00000524028 FAM135AQ9P2D6 1515 aa29.62■■■□□ 2.33
PTP4A3-206ENST00000524028 TNRQ92752 1358 aa29.62■■■□□ 2.33
PTP4A3-206ENST00000524028 DNMT1P26358 1616 aaKnown RBP29.6■■■□□ 2.33
PTP4A3-206ENST00000524028 ZNF335Q9H4Z2 1342 aaPredicted RBP29.59■■■□□ 2.33
PTP4A3-206ENST00000524028 RNF17Q9BXT8 1623 aaKnown RBP29.53■■■□□ 2.32
PTP4A3-206ENST00000524028 APLP2Q06481 763 aa29.53■■■□□ 2.32
PTP4A3-206ENST00000524028 IQSEC2Q5JU85 1478 aa29.52■■■□□ 2.32
PTP4A3-206ENST00000524028 ABCC3O15438 1527 aa29.5■■■□□ 2.31
PTP4A3-206ENST00000524028 ABCC5O15440 1437 aa29.49■■■□□ 2.31
PTP4A3-206ENST00000524028 MROH1Q8NDA8 1641 aa29.48■■■□□ 2.31
PTP4A3-206ENST00000524028 EIF2AK4Q9P2K8 1649 aaKnown RBP29.48■■■□□ 2.31
PTP4A3-206ENST00000524028 DUOX2Q9NRD8 1548 aa29.46■■■□□ 2.31
PTP4A3-206ENST00000524028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.46■■■□□ 2.317e-7■■■■□ 19.6
PTP4A3-206ENST00000524028 NLRP1Q9C000 1473 aa29.46■■■□□ 2.31
PTP4A3-206ENST00000524028 PTPN23Q9H3S7 1636 aa29.45■■■□□ 2.31
PTP4A3-206ENST00000524028 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
PTP4A3-206ENST00000524028 NEURL4Q96JN8 1562 aa29.43■■■□□ 2.3
PTP4A3-206ENST00000524028 KIF15Q9NS87 1388 aa29.43■■■□□ 2.3
PTP4A3-206ENST00000524028 THEMISQ8N1K5 641 aaPredicted RBP29.43■■■□□ 2.3
PTP4A3-206ENST00000524028 SHANK2Q9UPX8 1470 aa29.42■■■□□ 2.3
PTP4A3-206ENST00000524028 ZC3H13Q5T200 1668 aaKnown RBP29.42■■■□□ 2.3
PTP4A3-206ENST00000524028 FGD6Q6ZV73 1430 aa29.42■■■□□ 2.3
PTP4A3-206ENST00000524028 DAPK1P53355 1430 aa29.41■■■□□ 2.3
PTP4A3-206ENST00000524028 ANKLE2Q86XL3 938 aa29.41■■■□□ 2.3
PTP4A3-206ENST00000524028 UGGT1Q9NYU2 1555 aa29.41■■■□□ 2.3
PTP4A3-206ENST00000524028 SPATA31D1Q6ZQQ2 1576 aa29.4■■■□□ 2.3
PTP4A3-206ENST00000524028 ERVK-7P63135 1459 aa29.39■■■□□ 2.3
PTP4A3-206ENST00000524028 CROCC2H7BZ55 1655 aa29.38■■■□□ 2.29
PTP4A3-206ENST00000524028 POLR1AO95602 1720 aaPredicted RBP29.37■■■□□ 2.29
PTP4A3-206ENST00000524028 ERBINQ96RT1 1412 aa29.37■■■□□ 2.29
PTP4A3-206ENST00000524028 UBAP1LF5GYI3 381 aa29.35■■■□□ 2.29
PTP4A3-206ENST00000524028 CEP152O94986 1710 aa29.34■■■□□ 2.29
PTP4A3-206ENST00000524028 CHIC2Q9UKJ5 165 aa29.34■■■□□ 2.29
PTP4A3-206ENST00000524028 PRDM15P57071 1507 aaPredicted RBP29.32■■■□□ 2.28
PTP4A3-206ENST00000524028 MED14O60244 1454 aa29.32■■■□□ 2.28
PTP4A3-206ENST00000524028 NPHP4O75161 1426 aaPredicted RBP29.31■■■□□ 2.28
PTP4A3-206ENST00000524028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.31■■■□□ 2.28
PTP4A3-206ENST00000524028 ARHGAP31Q2M1Z3 1444 aa29.29■■■□□ 2.28
PTP4A3-206ENST00000524028 DEPDC5O75140 1603 aa29.29■■■□□ 2.28
PTP4A3-206ENST00000524028 ANKRD30AQ9BXX3 1397 aa29.27■■■□□ 2.28
PTP4A3-206ENST00000524028 VWDEQ8N2E2 1590 aa29.26■■■□□ 2.28
PTP4A3-206ENST00000524028 DISP3Q9P2K9 1392 aa29.26■■■□□ 2.27
PTP4A3-206ENST00000524028 CPS1P31327 1500 aa29.25■■■□□ 2.27
PTP4A3-206ENST00000524028 CFAP65Q6ZU64 1925 aaKnown RBP29.22■■■□□ 2.27
PTP4A3-206ENST00000524028 KANK1Q14678 1352 aa29.21■■■□□ 2.27
PTP4A3-206ENST00000524028 UBR1Q8IWV7 1749 aa29.2■■■□□ 2.27
PTP4A3-206ENST00000524028 FAM50AQ14320 339 aaKnown RBP29.2■■■□□ 2.26
PTP4A3-206ENST00000524028 IQGAP1P46940 1657 aa29.19■■■□□ 2.26
PTP4A3-206ENST00000524028 ADGRL2O95490 1459 aa29.17■■■□□ 2.26
PTP4A3-206ENST00000524028 LTKP29376 864 aa29.17■■■□□ 2.26
PTP4A3-206ENST00000524028 ILDR2Q71H61 639 aa29.17■■■□□ 2.26
PTP4A3-206ENST00000524028 LMTK2Q8IWU2 1503 aa29.16■■■□□ 2.26
PTP4A3-206ENST00000524028 ARHGAP23Q9P227 1491 aa29.16■■■□□ 2.26
PTP4A3-206ENST00000524028 SCAF11Q99590 1463 aaKnown RBP29.14■■■□□ 2.26
PTP4A3-206ENST00000524028 TOM1O60784 492 aa29.13■■■□□ 2.25
PTP4A3-206ENST00000524028 PIP4K2BP78356 416 aa29.13■■■□□ 2.25
PTP4A3-206ENST00000524028 TXNDC2Q86VQ3 553 aa29.13■■■□□ 2.25
PTP4A3-206ENST00000524028 SLIT1O75093 1534 aa29.13■■■□□ 2.25
PTP4A3-206ENST00000524028 IDI1Q13907 227 aa29.1■■■□□ 2.25
PTP4A3-206ENST00000524028 SCAF1Q9H7N4 1312 aaKnown RBP29.1■■■□□ 2.25
PTP4A3-206ENST00000524028 PIK3C2BO00750 1634 aa29.09■■■□□ 2.25
PTP4A3-206ENST00000524028 STRCP1A6NGW2 1772 aa29.09■■■□□ 2.25
PTP4A3-206ENST00000524028 HSPA1LP34931 641 aa29.07■■■□□ 2.24
PTP4A3-206ENST00000524028 LRRC7Q96NW7 1537 aa29.07■■■□□ 2.24
PTP4A3-206ENST00000524028 TMEM2Q9UHN6 1383 aa29.07■■■□□ 2.24
PTP4A3-206ENST00000524028 ANKRD50Q9ULJ7 1429 aa29.07■■■□□ 2.24
PTP4A3-206ENST00000524028 NOS1P29475 1434 aa29.06■■■□□ 2.24
PTP4A3-206ENST00000524028 EID1Q9Y6B2 187 aa29.06■■■□□ 2.24
PTP4A3-206ENST00000524028 ALKQ9UM73 1620 aa29.05■■■□□ 2.24
PTP4A3-206ENST00000524028 SYNMO15061 1565 aa29.05■■■□□ 2.24
PTP4A3-206ENST00000524028 EFCAB6Q5THR3 1501 aa29.05■■■□□ 2.24
PTP4A3-206ENST00000524028 STAG3Q9UJ98 1225 aa29.05■■■□□ 2.24
PTP4A3-206ENST00000524028 KDM5AP29375 1690 aaKnown RBP28.96■■■□□ 2.23
PTP4A3-206ENST00000524028 SLC52A1Q9NWF4 448 aa28.96■■■□□ 2.23
PTP4A3-206ENST00000524028 PPARGC1BQ86YN6 1023 aaKnown RBP28.95■■■□□ 2.22
PTP4A3-206ENST00000524028 RPRD2Q5VT52 1461 aaKnown RBP28.93■■■□□ 2.22
PTP4A3-206ENST00000524028 ADGRB3O60242 1522 aa28.93■■■□□ 2.22
PTP4A3-206ENST00000524028 ROCK1Q13464 1354 aa28.92■■■□□ 2.22
PTP4A3-206ENST00000524028 TET3O43151 1660 aa28.9■■■□□ 2.22
PTP4A3-206ENST00000524028 SOCS7O14512 581 aa28.9■■■□□ 2.22
PTP4A3-206ENST00000524028 SLC26A8Q96RN1 970 aa28.9■■■□□ 2.22
PTP4A3-206ENST00000524028 UNC13BO14795 1591 aa28.88■■■□□ 2.21
PTP4A3-206ENST00000524028 ITGAEP38570 1179 aa28.87■■■□□ 2.21
PTP4A3-206ENST00000524028 KCNA6P17658 529 aa28.85■■■□□ 2.21
PTP4A3-206ENST00000524028 SENP3Q9H4L4 574 aaPredicted RBP28.85■■■□□ 2.21
PTP4A3-206ENST00000524028 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
PTP4A3-206ENST00000524028 ZFYVE9O95405 1425 aa28.82■■■□□ 2.2
PTP4A3-206ENST00000524028 MED1Q15648 1581 aaPredicted RBP28.81■■■□□ 2.2
PTP4A3-206ENST00000524028 TMEM94Q12767 1356 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms