RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-227ENST00000523867 ZMYND15Q9H091 742 aa9.83□□□□□ -0.84
HDAC9-227ENST00000523867 GCC2Q8IWJ2 1684 aa9.83□□□□□ -0.84
HDAC9-227ENST00000523867 ANP32AP39687 249 aaKnown RBP9.83□□□□□ -0.84
HDAC9-227ENST00000523867 C1orf115Q9H7X2 142 aa9.83□□□□□ -0.84
HDAC9-227ENST00000523867 FOXD4L1Q9NU39 408 aa9.83□□□□□ -0.84
HDAC9-227ENST00000523867 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-227ENST00000523867 TMED8Q6PL24 325 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-227ENST00000523867 MIA2Q96PC5 1412 aa9.81□□□□□ -0.84
HDAC9-227ENST00000523867 CCDC184Q52MB2 194 aa9.81□□□□□ -0.84
HDAC9-227ENST00000523867 NAP1L5Q96NT1 182 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-227ENST00000523867 PIAS4Q8N2W9 510 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-227ENST00000523867 PRKRIP1Q9H875 184 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-227ENST00000523867 EPRSP07814 1512 aaKnown RBP9.8□□□□□ -0.84
HDAC9-227ENST00000523867 KDM6BO15054 1643 aa9.8□□□□□ -0.84
HDAC9-227ENST00000523867 FAM9BQ8IZU0 186 aa9.8□□□□□ -0.84
HDAC9-227ENST00000523867 ZNF592Q92610 1267 aa9.8□□□□□ -0.84
HDAC9-227ENST00000523867 CCDC7Q96M83 1385 aa9.8□□□□□ -0.84
HDAC9-227ENST00000523867 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
HDAC9-227ENST00000523867 ZBTB7CA1YPR0 619 aa9.79□□□□□ -0.84
HDAC9-227ENST00000523867 ARID3CA6NKF2 412 aa9.79□□□□□ -0.84
HDAC9-227ENST00000523867 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
HDAC9-227ENST00000523867 NCOA1Q15788 1441 aa9.79□□□□□ -0.84
HDAC9-227ENST00000523867 ERCC6L2Q5T890 1561 aa9.79□□□□□ -0.84
HDAC9-227ENST00000523867 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
HDAC9-227ENST00000523867 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-227ENST00000523867 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.84
HDAC9-227ENST00000523867 ABCC10Q5T3U5 1492 aa9.77□□□□□ -0.85
HDAC9-227ENST00000523867 NBPF8Q3BBV2 869 aa9.77□□□□□ -0.85
HDAC9-227ENST00000523867 ANKRD30BQ9BXX2 1392 aa9.76□□□□□ -0.85
HDAC9-227ENST00000523867 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
HDAC9-227ENST00000523867 IQGAP2Q13576 1575 aa9.76□□□□□ -0.85
HDAC9-227ENST00000523867 PPM1GO15355 546 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-227ENST00000523867 RPRD2Q5VT52 1461 aaKnown RBP9.76□□□□□ -0.85
HDAC9-227ENST00000523867 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-227ENST00000523867 ROCK1Q13464 1354 aa9.76□□□□□ -0.85
HDAC9-227ENST00000523867 PRG4Q92954 1404 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-227ENST00000523867 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
HDAC9-227ENST00000523867 DAPK1P53355 1430 aa9.75□□□□□ -0.85
HDAC9-227ENST00000523867 KIF7Q2M1P5 1343 aa9.74□□□□□ -0.85
HDAC9-227ENST00000523867 TEX14Q8IWB6 1497 aa9.73□□□□□ -0.85
HDAC9-227ENST00000523867 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
HDAC9-227ENST00000523867 B4GALNT3Q6L9W6 998 aa9.73□□□□□ -0.85
HDAC9-227ENST00000523867 TICAM2Q86XR7 235 aa9.73□□□□□ -0.85
HDAC9-227ENST00000523867 ABCC5O15440 1437 aa9.73□□□□□ -0.85
HDAC9-227ENST00000523867 SPATA31E1Q6ZUB1 1445 aa9.73□□□□□ -0.85
HDAC9-227ENST00000523867 NEFMP07197 916 aa9.72□□□□□ -0.85
HDAC9-227ENST00000523867 GSE1Q14687 1217 aa9.72□□□□□ -0.85
HDAC9-227ENST00000523867 CWC22Q9HCG8 908 aaKnown RBP9.72□□□□□ -0.85
HDAC9-227ENST00000523867 DIP2BQ9P265 1576 aa9.72□□□□□ -0.85
HDAC9-227ENST00000523867 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
HDAC9-227ENST00000523867 ZNF644Q9H582 1327 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-227ENST00000523867 RBM10P98175 930 aaKnown RBP9.71□□□□□ -0.85
HDAC9-227ENST00000523867 JPH4Q96JJ6 628 aa9.71□□□□□ -0.85
HDAC9-227ENST00000523867 PRDM10Q9NQV6 1147 aa9.7□□□□□ -0.86
HDAC9-227ENST00000523867 DNMT1P26358 1616 aaKnown RBP9.7□□□□□ -0.86
HDAC9-227ENST00000523867 KIAA0586Q9BVV6 1533 aa9.7□□□□□ -0.86
HDAC9-227ENST00000523867 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-227ENST00000523867 FOXD4L5Q5VV16 416 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-227ENST00000523867 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-227ENST00000523867 CNGB1Q14028 1251 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-227ENST00000523867 CERS3Q8IU89 383 aa9.69□□□□□ -0.86
HDAC9-227ENST00000523867 RAD21O60216 631 aa9.68□□□□□ -0.86
HDAC9-227ENST00000523867 ADCY10Q96PN6 1610 aa9.68□□□□□ -0.86
HDAC9-227ENST00000523867 MTMR7Q9Y216 660 aa9.68□□□□□ -0.86
HDAC9-227ENST00000523867 POLR1AO95602 1720 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-227ENST00000523867 GLI2P10070 1586 aa9.67□□□□□ -0.86
HDAC9-227ENST00000523867 CFDP1Q9UEE9 299 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-227ENST00000523867 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
HDAC9-227ENST00000523867 NUP153P49790 1475 aaKnown RBP9.67□□□□□ -0.86
HDAC9-227ENST00000523867 PZPP20742 1482 aa9.66□□□□□ -0.86
HDAC9-227ENST00000523867 RBM25P49756 843 aaKnown RBP9.66□□□□□ -0.86
HDAC9-227ENST00000523867 FAM69CQ0P6D2 419 aa9.66□□□□□ -0.86
HDAC9-227ENST00000523867 DHX29Q7Z478 1369 aaKnown RBP9.66□□□□□ -0.86
HDAC9-227ENST00000523867 KCTD17Q8N5Z5 321 aa9.66□□□□□ -0.86
HDAC9-227ENST00000523867 USP47Q96K76 1375 aa9.66□□□□□ -0.86
HDAC9-227ENST00000523867 NUDCQ9Y266 331 aa9.66□□□□□ -0.86
HDAC9-227ENST00000523867 HSP90AA2PQ14568 343 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-227ENST00000523867 DISP1Q96F81 1524 aa9.65□□□□□ -0.86
HDAC9-227ENST00000523867 KIAA1107Q9UPP5 1409 aa9.65□□□□□ -0.86
HDAC9-227ENST00000523867 KIAA0556O60303 1618 aa9.65□□□□□ -0.87
HDAC9-227ENST00000523867 ARID4BQ4LE39 1312 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-227ENST00000523867 PKD2Q13563 968 aa9.64□□□□□ -0.87
HDAC9-227ENST00000523867 ZNF777Q9ULD5 760 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-227ENST00000523867 UHRF1BP1LA0JNW5 1464 aa9.64□□□□□ -0.87
HDAC9-227ENST00000523867 RAPGEF6Q8TEU7 1601 aa9.64□□□□□ -0.87
HDAC9-227ENST00000523867 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
HDAC9-227ENST00000523867 CAMSAP2Q08AD1 1489 aa9.64□□□□□ -0.87
HDAC9-227ENST00000523867 MBD5Q9P267 1494 aa9.64□□□□□ -0.87
HDAC9-227ENST00000523867 PLB1Q6P1J6 1458 aa9.63□□□□□ -0.87
HDAC9-227ENST00000523867 TROQ12816 1431 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-227ENST00000523867 FAM177A1Q8N128 213 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-227ENST00000523867 ZNF526Q8TF50 670 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-227ENST00000523867 TMC1Q8TDI8 760 aa9.62□□□□□ -0.87
HDAC9-227ENST00000523867 CARMIL2Q6F5E8 1435 aa9.62□□□□□ -0.87
HDAC9-227ENST00000523867 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
HDAC9-227ENST00000523867 ROCK2O75116 1388 aaKnown RBP9.62□□□□□ -0.87
HDAC9-227ENST00000523867 ANKRD30AQ9BXX3 1397 aa9.62□□□□□ -0.87
HDAC9-227ENST00000523867 PNISRQ8TF01 805 aaKnown RBP9.61□□□□□ -0.87
HDAC9-227ENST00000523867 PRDM16Q9HAZ2 1276 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms