RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
FAM49B-227ENST00000523514 PTPN23Q9H3S7 1636 aa12□□□□□ -0.49
FAM49B-227ENST00000523514 ADAMTSL3P82987 1691 aa12□□□□□ -0.49
FAM49B-227ENST00000523514 RTEL1-TNFRSF6BF6WH68 1400 aa12□□□□□ -0.49
FAM49B-227ENST00000523514 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
FAM49B-227ENST00000523514 FGD6Q6ZV73 1430 aa11.99□□□□□ -0.49
FAM49B-227ENST00000523514 AGLP35573 1532 aa11.99□□□□□ -0.49
FAM49B-227ENST00000523514 SIGLEC1Q9BZZ2 1709 aa11.99□□□□□ -0.49
FAM49B-227ENST00000523514 TCOF1Q13428 1488 aaKnown RBP11.98□□□□□ -0.49
FAM49B-227ENST00000523514 MAST1Q9Y2H9 1570 aa11.97□□□□□ -0.49
FAM49B-227ENST00000523514 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
FAM49B-227ENST00000523514 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
FAM49B-227ENST00000523514 PLXNC1O60486 1568 aa11.96□□□□□ -0.49
FAM49B-227ENST00000523514 TSPY4P0CV99 314 aa11.96□□□□□ -0.49
FAM49B-227ENST00000523514 TSPY10P0CW01 314 aa11.96□□□□□ -0.49
FAM49B-227ENST00000523514 FER1L4A9Z1Z3 1794 aa11.96□□□□□ -0.49
FAM49B-227ENST00000523514 CROCC2H7BZ55 1655 aa11.96□□□□□ -0.5
FAM49B-227ENST00000523514 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
FAM49B-227ENST00000523514 DNMT1P26358 1616 aaKnown RBP11.95□□□□□ -0.5
FAM49B-227ENST00000523514 A2MP01023 1474 aa11.95□□□□□ -0.5
FAM49B-227ENST00000523514 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
FAM49B-227ENST00000523514 RIMS1Q86UR5 1692 aaKnown RBP11.94□□□□□ -0.5
FAM49B-227ENST00000523514 PTPRMP28827 1452 aa11.92□□□□□ -0.5
FAM49B-227ENST00000523514 DAPK1P53355 1430 aa11.91□□□□□ -0.5
FAM49B-227ENST00000523514 DHX29Q7Z478 1369 aaKnown RBP11.91□□□□□ -0.5
FAM49B-227ENST00000523514 ABCC5O15440 1437 aa11.9□□□□□ -0.5
FAM49B-227ENST00000523514 PROM2Q8N271 834 aa11.9□□□□□ -0.5
FAM49B-227ENST00000523514 EIF2AK4Q9P2K8 1649 aaKnown RBP11.89□□□□□ -0.51
FAM49B-227ENST00000523514 CNTLNQ9NXG0 1405 aa11.89□□□□□ -0.51
FAM49B-227ENST00000523514 MLECQ14165 292 aa11.89□□□□□ -0.51
FAM49B-227ENST00000523514 FAM135AQ9P2D6 1515 aa11.89□□□□□ -0.51
FAM49B-227ENST00000523514 MROH2AA6NES4 1674 aa11.88□□□□□ -0.51
FAM49B-227ENST00000523514 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
FAM49B-227ENST00000523514 ESF1Q9H501 851 aaKnown RBP11.88□□□□□ -0.51
FAM49B-227ENST00000523514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.88□□□□□ -0.517e-9■□□□□ 11
FAM49B-227ENST00000523514 FAM50AQ14320 339 aaKnown RBP11.87□□□□□ -0.51
FAM49B-227ENST00000523514 ADGRL2O95490 1459 aa11.86□□□□□ -0.51
FAM49B-227ENST00000523514 ANKRD30AQ9BXX3 1397 aa11.85□□□□□ -0.51
FAM49B-227ENST00000523514 KIF15Q9NS87 1388 aa11.85□□□□□ -0.51
FAM49B-227ENST00000523514 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
FAM49B-227ENST00000523514 ERBINQ96RT1 1412 aa11.85□□□□□ -0.51
FAM49B-227ENST00000523514 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
FAM49B-227ENST00000523514 CLTCQ00610 1675 aaKnown RBP11.84□□□□□ -0.51
FAM49B-227ENST00000523514 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
FAM49B-227ENST00000523514 C3P01024 1663 aa11.83□□□□□ -0.52
FAM49B-227ENST00000523514 ZC3H13Q5T200 1668 aaKnown RBP11.83□□□□□ -0.52
FAM49B-227ENST00000523514 KDM5DQ9BY66 1539 aa11.82□□□□□ -0.52
FAM49B-227ENST00000523514 KIF3BO15066 747 aa11.82□□□□□ -0.52
FAM49B-227ENST00000523514 GGT6Q6P531 493 aa11.82□□□□□ -0.52
FAM49B-227ENST00000523514 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
FAM49B-227ENST00000523514 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
FAM49B-227ENST00000523514 SETD1BQ9UPS6 1966 aaKnown RBP11.8□□□□□ -0.52
FAM49B-227ENST00000523514 PRDM15P57071 1507 aaPredicted RBP11.8□□□□□ -0.52
FAM49B-227ENST00000523514 ROCK1Q13464 1354 aa11.79□□□□□ -0.52
FAM49B-227ENST00000523514 DEPDC5O75140 1603 aa11.79□□□□□ -0.52
FAM49B-227ENST00000523514 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
FAM49B-227ENST00000523514 CHIC2Q9UKJ5 165 aa11.79□□□□□ -0.52
FAM49B-227ENST00000523514 MROH1Q8NDA8 1641 aa11.78□□□□□ -0.52
FAM49B-227ENST00000523514 NPATQ14207 1427 aa11.78□□□□□ -0.52
FAM49B-227ENST00000523514 ZMYM3Q14202 1370 aa11.78□□□□□ -0.52
FAM49B-227ENST00000523514 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
FAM49B-227ENST00000523514 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
FAM49B-227ENST00000523514 ABCC3O15438 1527 aa11.76□□□□□ -0.53
FAM49B-227ENST00000523514 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
FAM49B-227ENST00000523514 WASHC2CQ9Y4E1 1318 aa11.76□□□□□ -0.53
FAM49B-227ENST00000523514 KANK1Q14678 1352 aa11.76□□□□□ -0.53
FAM49B-227ENST00000523514 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
FAM49B-227ENST00000523514 PZPP20742 1482 aa11.76□□□□□ -0.53
FAM49B-227ENST00000523514 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
FAM49B-227ENST00000523514 CEP152O94986 1710 aa11.75□□□□□ -0.53
FAM49B-227ENST00000523514 CEBPAP49715 358 aaPredicted RBP11.75□□□□□ -0.53
FAM49B-227ENST00000523514 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
FAM49B-227ENST00000523514 ITGAEP38570 1179 aa11.73□□□□□ -0.53
FAM49B-227ENST00000523514 VWDEQ8N2E2 1590 aa11.73□□□□□ -0.53
FAM49B-227ENST00000523514 MYO3AQ8NEV4 1616 aa11.73□□□□□ -0.53
FAM49B-227ENST00000523514 ZNF142P52746 1687 aaPredicted RBP11.72□□□□□ -0.53
FAM49B-227ENST00000523514 GCC2Q8IWJ2 1684 aa11.72□□□□□ -0.53
FAM49B-227ENST00000523514 UNC13BO14795 1591 aa11.72□□□□□ -0.53
FAM49B-227ENST00000523514 LMTK2Q8IWU2 1503 aa11.72□□□□□ -0.53
FAM49B-227ENST00000523514 ARHGAP31Q2M1Z3 1444 aa11.71□□□□□ -0.53
FAM49B-227ENST00000523514 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
FAM49B-227ENST00000523514 SPATA31D1Q6ZQQ2 1576 aa11.69□□□□□ -0.54
FAM49B-227ENST00000523514 CEP170BQ9Y4F5 1589 aaPredicted RBP11.69□□□□□ -0.54
FAM49B-227ENST00000523514 EFCAB6Q5THR3 1501 aa11.69□□□□□ -0.54
FAM49B-227ENST00000523514 TET3O43151 1660 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 TNRQ92752 1358 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 ERVK-7P63135 1459 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 HFM1A2PYH4 1435 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
FAM49B-227ENST00000523514 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
FAM49B-227ENST00000523514 A2ML1A8K2U0 1454 aa11.67□□□□□ -0.54
FAM49B-227ENST00000523514 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
FAM49B-227ENST00000523514 NAIPQ13075 1403 aa11.67□□□□□ -0.54
FAM49B-227ENST00000523514 RPRD2Q5VT52 1461 aaKnown RBP11.66□□□□□ -0.54
FAM49B-227ENST00000523514 HSPA2P54652 639 aa11.64□□□□□ -0.55
FAM49B-227ENST00000523514 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms