RNA–Protein interactions for RNA: ENST00000523467.1

NEFM-206, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 582 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-206ENST00000523467 RNF17Q9BXT8 1623 aaKnown RBP23.56■■□□□ 1.36
NEFM-206ENST00000523467 FAM135AQ9P2D6 1515 aa23.56■■□□□ 1.36
NEFM-206ENST00000523467 DUOX2Q9NRD8 1548 aa23.55■■□□□ 1.36
NEFM-206ENST00000523467 PTPRKQ15262 1439 aa23.55■■□□□ 1.36
NEFM-206ENST00000523467 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
NEFM-206ENST00000523467 KIF15Q9NS87 1388 aa23.52■■□□□ 1.36
NEFM-206ENST00000523467 STRCQ7RTU9 1775 aa23.52■■□□□ 1.36
NEFM-206ENST00000523467 WASHC2CQ9Y4E1 1318 aa23.51■■□□□ 1.35
NEFM-206ENST00000523467 FAM50AQ14320 339 aaKnown RBP23.5■■□□□ 1.35
NEFM-206ENST00000523467 ZNF142P52746 1687 aaPredicted RBP23.5■■□□□ 1.35
NEFM-206ENST00000523467 ZC3H13Q5T200 1668 aaKnown RBP23.49■■□□□ 1.35
NEFM-206ENST00000523467 RRP7BPQ9NSQ0 103 aa23.49■■□□□ 1.35
NEFM-206ENST00000523467 MROH1Q8NDA8 1641 aa23.48■■□□□ 1.35
NEFM-206ENST00000523467 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
NEFM-206ENST00000523467 PZPP20742 1482 aa23.47■■□□□ 1.35
NEFM-206ENST00000523467 CEP170BQ9Y4F5 1589 aaPredicted RBP23.47■■□□□ 1.35
NEFM-206ENST00000523467 CEP152O94986 1710 aa23.47■■□□□ 1.35
NEFM-206ENST00000523467 ABCC3O15438 1527 aa23.46■■□□□ 1.35
NEFM-206ENST00000523467 ERBINQ96RT1 1412 aa23.46■■□□□ 1.35
NEFM-206ENST00000523467 ANKRD30AQ9BXX3 1397 aa23.45■■□□□ 1.34
NEFM-206ENST00000523467 CAMSAP1Q5T5Y3 1602 aa23.44■■□□□ 1.34
NEFM-206ENST00000523467 PPARGC1BQ86YN6 1023 aaKnown RBP23.44■■□□□ 1.34
NEFM-206ENST00000523467 NCOA1Q15788 1441 aa23.42■■□□□ 1.34
NEFM-206ENST00000523467 TNRQ92752 1358 aa23.42■■□□□ 1.34
NEFM-206ENST00000523467 FBXO31Q5XUX0 539 aaPredicted RBP23.42■■□□□ 1.34
NEFM-206ENST00000523467 ILDR1Q86SU0 546 aaPredicted RBP23.41■■□□□ 1.34
NEFM-206ENST00000523467 PRDM15P57071 1507 aaPredicted RBP23.41■■□□□ 1.34
NEFM-206ENST00000523467 ADGRL2O95490 1459 aa23.4■■□□□ 1.34
NEFM-206ENST00000523467 A2ML1A8K2U0 1454 aa23.39■■□□□ 1.34
NEFM-206ENST00000523467 DMRT2Q9Y5R5 561 aa23.39■■□□□ 1.33
NEFM-206ENST00000523467 DEPDC5O75140 1603 aa23.39■■□□□ 1.33
NEFM-206ENST00000523467 CFAP65Q6ZU64 1925 aaKnown RBP23.37■■□□□ 1.33
NEFM-206ENST00000523467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.35■■□□□ 1.33
NEFM-206ENST00000523467 PTPRTO14522 1441 aa23.34■■□□□ 1.33
NEFM-206ENST00000523467 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
NEFM-206ENST00000523467 SPATA31D1Q6ZQQ2 1576 aa23.33■■□□□ 1.33
NEFM-206ENST00000523467 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
NEFM-206ENST00000523467 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
NEFM-206ENST00000523467 NLRP1Q9C000 1473 aa23.31■■□□□ 1.32
NEFM-206ENST00000523467 KANK1Q14678 1352 aa23.31■■□□□ 1.32
NEFM-206ENST00000523467 ANKRD50Q9ULJ7 1429 aa23.29■■□□□ 1.32
NEFM-206ENST00000523467 POLR1AO95602 1720 aaPredicted RBP23.28■■□□□ 1.32
NEFM-206ENST00000523467 VWDEQ8N2E2 1590 aa23.27■■□□□ 1.32
NEFM-206ENST00000523467 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
NEFM-206ENST00000523467 ITGAEP38570 1179 aa23.26■■□□□ 1.31
NEFM-206ENST00000523467 PKD2Q13563 968 aa23.26■■□□□ 1.31
NEFM-206ENST00000523467 FBXO41Q8TF61 875 aa23.26■■□□□ 1.31
NEFM-206ENST00000523467 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
NEFM-206ENST00000523467 CERKQ8TCT0 537 aa23.25■■□□□ 1.31
NEFM-206ENST00000523467 LMTK2Q8IWU2 1503 aa23.24■■□□□ 1.31
NEFM-206ENST00000523467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.24■■□□□ 1.31
NEFM-206ENST00000523467 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
NEFM-206ENST00000523467 EFCAB6Q5THR3 1501 aa23.21■■□□□ 1.31
NEFM-206ENST00000523467 NEURL4Q96JN8 1562 aa23.2■■□□□ 1.3
NEFM-206ENST00000523467 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
NEFM-206ENST00000523467 UBR1Q8IWV7 1749 aa23.19■■□□□ 1.3
NEFM-206ENST00000523467 UNC13BO14795 1591 aa23.19■■□□□ 1.3
NEFM-206ENST00000523467 RRBP1Q9P2E9 1410 aaKnown RBP23.18■■□□□ 1.3
NEFM-206ENST00000523467 LTBP4Q8N2S1 1624 aa23.18■■□□□ 1.3
NEFM-206ENST00000523467 TET3O43151 1660 aa23.16■■□□□ 1.3
NEFM-206ENST00000523467 PIK3C2BO00750 1634 aa23.15■■□□□ 1.3
NEFM-206ENST00000523467 ZNF335Q9H4Z2 1342 aaPredicted RBP23.14■■□□□ 1.3
NEFM-206ENST00000523467 ANKLE2Q86XL3 938 aa23.14■■□□□ 1.29
NEFM-206ENST00000523467 SYNMO15061 1565 aa23.14■■□□□ 1.29
NEFM-206ENST00000523467 GCC2Q8IWJ2 1684 aa23.13■■□□□ 1.29
NEFM-206ENST00000523467 IQGAP1P46940 1657 aa23.1■■□□□ 1.29
NEFM-206ENST00000523467 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
NEFM-206ENST00000523467 IQGAP3Q86VI3 1631 aa23.1■■□□□ 1.29
NEFM-206ENST00000523467 NOS1P29475 1434 aa23.09■■□□□ 1.29
NEFM-206ENST00000523467 RPRD2Q5VT52 1461 aaKnown RBP23.09■■□□□ 1.29
NEFM-206ENST00000523467 MED14O60244 1454 aa23.08■■□□□ 1.29
NEFM-206ENST00000523467 E9PCH4 1651 aa23.06■■□□□ 1.28
NEFM-206ENST00000523467 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
NEFM-206ENST00000523467 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
NEFM-206ENST00000523467 SLIT1O75093 1534 aa23.05■■□□□ 1.28
NEFM-206ENST00000523467 SCAF11Q99590 1463 aaKnown RBP23.05■■□□□ 1.28
NEFM-206ENST00000523467 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
NEFM-206ENST00000523467 NUP155O75694 1391 aa23.04■■□□□ 1.28
NEFM-206ENST00000523467 IDI1Q13907 227 aa23.04■■□□□ 1.28
NEFM-206ENST00000523467 IQSEC2Q5JU85 1478 aa23.04■■□□□ 1.28
NEFM-206ENST00000523467 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
NEFM-206ENST00000523467 TXNDC2Q86VQ3 553 aa23■■□□□ 1.27
NEFM-206ENST00000523467 MYO5BQ9ULV0 1848 aa23■■□□□ 1.27
NEFM-206ENST00000523467 TMEM2Q9UHN6 1383 aa23■■□□□ 1.27
NEFM-206ENST00000523467 SLC52A1Q9NWF4 448 aa22.99■■□□□ 1.27
NEFM-206ENST00000523467 NAIPQ13075 1403 aa22.99■■□□□ 1.27
NEFM-206ENST00000523467 LTKP29376 864 aa22.98■■□□□ 1.27
NEFM-206ENST00000523467 EID1Q9Y6B2 187 aa22.98■■□□□ 1.27
NEFM-206ENST00000523467 CPS1P31327 1500 aa22.98■■□□□ 1.27
NEFM-206ENST00000523467 STRCP1A6NGW2 1772 aa22.94■■□□□ 1.26
NEFM-206ENST00000523467 HFM1A2PYH4 1435 aa22.93■■□□□ 1.26
NEFM-206ENST00000523467 TMEM131LA2VDJ0 1609 aa22.93■■□□□ 1.26
NEFM-206ENST00000523467 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
NEFM-206ENST00000523467 CHGAP10645 457 aaKnown RBP22.89■■□□□ 1.25
NEFM-206ENST00000523467 UBAP1LF5GYI3 381 aa22.88■■□□□ 1.25
NEFM-206ENST00000523467 ZFYVE9O95405 1425 aa22.85■■□□□ 1.25
NEFM-206ENST00000523467 RIMS2Q9UQ26 1411 aa22.85■■□□□ 1.25
NEFM-206ENST00000523467 TRIM52Q96A61 297 aa22.85■■□□□ 1.25
NEFM-206ENST00000523467 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.25
NEFM-206ENST00000523467 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms