RNA–Protein interactions for RNA: ENST00000523456.1

PDGFRB-211, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 2

Gene PDGFRB, Length 1,023 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-211ENST00000523456 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
PDGFRB-211ENST00000523456 CAMSAP1Q5T5Y3 1602 aa17.62■□□□□ 0.41
PDGFRB-211ENST00000523456 TSPY4P0CV99 314 aa17.62■□□□□ 0.41
PDGFRB-211ENST00000523456 TSPY10P0CW01 314 aa17.62■□□□□ 0.41
PDGFRB-211ENST00000523456 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
PDGFRB-211ENST00000523456 CEP170BQ9Y4F5 1589 aaPredicted RBP17.62■□□□□ 0.41
PDGFRB-211ENST00000523456 MYOM3Q5VTT5 1437 aa17.61■□□□□ 0.41
PDGFRB-211ENST00000523456 PZPP20742 1482 aa17.59■□□□□ 0.41
PDGFRB-211ENST00000523456 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
PDGFRB-211ENST00000523456 PKD2Q13563 968 aa17.59■□□□□ 0.41
PDGFRB-211ENST00000523456 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.41
PDGFRB-211ENST00000523456 KIF3BO15066 747 aa17.58■□□□□ 0.4
PDGFRB-211ENST00000523456 LTBP4Q8N2S1 1624 aa17.58■□□□□ 0.4
PDGFRB-211ENST00000523456 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
PDGFRB-211ENST00000523456 EIF2AK4Q9P2K8 1649 aaKnown RBP17.57■□□□□ 0.4
PDGFRB-211ENST00000523456 KANK4Q5T7N3 995 aaPredicted RBP17.56■□□□□ 0.4
PDGFRB-211ENST00000523456 ZC3H13Q5T200 1668 aaKnown RBP17.55■□□□□ 0.4
PDGFRB-211ENST00000523456 SHANK2Q9UPX8 1470 aa17.54■□□□□ 0.4
PDGFRB-211ENST00000523456 WASHC2CQ9Y4E1 1318 aa17.53■□□□□ 0.4
PDGFRB-211ENST00000523456 DNMT1P26358 1616 aaKnown RBP17.53■□□□□ 0.4
PDGFRB-211ENST00000523456 TNRQ92752 1358 aa17.53■□□□□ 0.4
PDGFRB-211ENST00000523456 NLRP1Q9C000 1473 aa17.52■□□□□ 0.4
PDGFRB-211ENST00000523456 DUOX2Q9NRD8 1548 aa17.51■□□□□ 0.39
PDGFRB-211ENST00000523456 ABCC3O15438 1527 aa17.49■□□□□ 0.39
PDGFRB-211ENST00000523456 NCKAP5LQ9HCH0 1330 aa17.48■□□□□ 0.39
PDGFRB-211ENST00000523456 APLP2Q06481 763 aa17.48■□□□□ 0.39
PDGFRB-211ENST00000523456 MROH1Q8NDA8 1641 aa17.47■□□□□ 0.39
PDGFRB-211ENST00000523456 CROCC2H7BZ55 1655 aa17.47■□□□□ 0.39
PDGFRB-211ENST00000523456 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
PDGFRB-211ENST00000523456 FBXO31Q5XUX0 539 aaPredicted RBP17.46■□□□□ 0.39
PDGFRB-211ENST00000523456 PTPN23Q9H3S7 1636 aa17.46■□□□□ 0.39
PDGFRB-211ENST00000523456 ABCC5O15440 1437 aa17.46■□□□□ 0.39
PDGFRB-211ENST00000523456 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
PDGFRB-211ENST00000523456 FGD6Q6ZV73 1430 aa17.45■□□□□ 0.38
PDGFRB-211ENST00000523456 PRDM15P57071 1507 aaPredicted RBP17.44■□□□□ 0.38
PDGFRB-211ENST00000523456 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
PDGFRB-211ENST00000523456 DEPDC5O75140 1603 aa17.43■□□□□ 0.38
PDGFRB-211ENST00000523456 KIF15Q9NS87 1388 aa17.43■□□□□ 0.38
PDGFRB-211ENST00000523456 ARHGAP31Q2M1Z3 1444 aa17.43■□□□□ 0.38
PDGFRB-211ENST00000523456 NEURL4Q96JN8 1562 aa17.43■□□□□ 0.38
PDGFRB-211ENST00000523456 UGGT1Q9NYU2 1555 aa17.43■□□□□ 0.38
PDGFRB-211ENST00000523456 MED14O60244 1454 aa17.43■□□□□ 0.38
PDGFRB-211ENST00000523456 DAPK1P53355 1430 aa17.42■□□□□ 0.38
PDGFRB-211ENST00000523456 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
PDGFRB-211ENST00000523456 ERVK-7P63135 1459 aa17.42■□□□□ 0.38
PDGFRB-211ENST00000523456 ZNF335Q9H4Z2 1342 aaPredicted RBP17.42■□□□□ 0.38
PDGFRB-211ENST00000523456 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
PDGFRB-211ENST00000523456 CPS1P31327 1500 aa17.4■□□□□ 0.38
PDGFRB-211ENST00000523456 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.38■□□□□ 0.37
PDGFRB-211ENST00000523456 ANKRD30AQ9BXX3 1397 aa17.37■□□□□ 0.37
PDGFRB-211ENST00000523456 CEP152O94986 1710 aa17.36■□□□□ 0.37
PDGFRB-211ENST00000523456 ADGRL2O95490 1459 aa17.36■□□□□ 0.37
PDGFRB-211ENST00000523456 LMTK2Q8IWU2 1503 aa17.36■□□□□ 0.37
PDGFRB-211ENST00000523456 NPHP4O75161 1426 aaPredicted RBP17.35■□□□□ 0.37
PDGFRB-211ENST00000523456 MED1Q15648 1581 aaPredicted RBP17.34■□□□□ 0.37
PDGFRB-211ENST00000523456 VWDEQ8N2E2 1590 aa17.34■□□□□ 0.37
PDGFRB-211ENST00000523456 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
PDGFRB-211ENST00000523456 KANK1Q14678 1352 aa17.33■□□□□ 0.36
PDGFRB-211ENST00000523456 RRP7BPQ9NSQ0 103 aa17.33■□□□□ 0.36
PDGFRB-211ENST00000523456 UBR1Q8IWV7 1749 aa17.32■□□□□ 0.36
PDGFRB-211ENST00000523456 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
PDGFRB-211ENST00000523456 SLIT1O75093 1534 aa17.31■□□□□ 0.36
PDGFRB-211ENST00000523456 KDM5AP29375 1690 aaKnown RBP17.31■□□□□ 0.36
PDGFRB-211ENST00000523456 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
PDGFRB-211ENST00000523456 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
PDGFRB-211ENST00000523456 SCAF11Q99590 1463 aaKnown RBP17.28■□□□□ 0.36
PDGFRB-211ENST00000523456 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
PDGFRB-211ENST00000523456 RPRD2Q5VT52 1461 aaKnown RBP17.25■□□□□ 0.35
PDGFRB-211ENST00000523456 SYNMO15061 1565 aa17.25■□□□□ 0.35
PDGFRB-211ENST00000523456 NOS1P29475 1434 aa17.24■□□□□ 0.35
PDGFRB-211ENST00000523456 TOM1O60784 492 aa17.24■□□□□ 0.35
PDGFRB-211ENST00000523456 ANKRD50Q9ULJ7 1429 aa17.23■□□□□ 0.35
PDGFRB-211ENST00000523456 HRCP23327 699 aa17.23■□□□□ 0.35
PDGFRB-211ENST00000523456 HSPA1LP34931 641 aa17.23■□□□□ 0.35
PDGFRB-211ENST00000523456 PIK3C2BO00750 1634 aa17.22■□□□□ 0.35
PDGFRB-211ENST00000523456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.35
PDGFRB-211ENST00000523456 CHIC2Q9UKJ5 165 aa17.22■□□□□ 0.35
PDGFRB-211ENST00000523456 TMEM2Q9UHN6 1383 aa17.22■□□□□ 0.35
PDGFRB-211ENST00000523456 CFAP65Q6ZU64 1925 aaKnown RBP17.21■□□□□ 0.35
PDGFRB-211ENST00000523456 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
PDGFRB-211ENST00000523456 EID1Q9Y6B2 187 aa17.2■□□□□ 0.34
PDGFRB-211ENST00000523456 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
PDGFRB-211ENST00000523456 LTKP29376 864 aa17.19■□□□□ 0.34
PDGFRB-211ENST00000523456 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
PDGFRB-211ENST00000523456 TXNDC2Q86VQ3 553 aa17.19■□□□□ 0.34
PDGFRB-211ENST00000523456 SLC52A1Q9NWF4 448 aa17.19■□□□□ 0.34
PDGFRB-211ENST00000523456 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
PDGFRB-211ENST00000523456 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
PDGFRB-211ENST00000523456 TET3O43151 1660 aa17.17■□□□□ 0.34
PDGFRB-211ENST00000523456 UNC13BO14795 1591 aa17.17■□□□□ 0.34
PDGFRB-211ENST00000523456 IDI1Q13907 227 aa17.17■□□□□ 0.34
PDGFRB-211ENST00000523456 ALKQ9UM73 1620 aa17.17■□□□□ 0.34
PDGFRB-211ENST00000523456 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
PDGFRB-211ENST00000523456 GCC2Q8IWJ2 1684 aa17.13■□□□□ 0.33
PDGFRB-211ENST00000523456 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
PDGFRB-211ENST00000523456 PIP4K2BP78356 416 aa17.1■□□□□ 0.33
PDGFRB-211ENST00000523456 IQGAP3Q86VI3 1631 aa17.1■□□□□ 0.33
PDGFRB-211ENST00000523456 ZFYVE9O95405 1425 aa17.08■□□□□ 0.32
PDGFRB-211ENST00000523456 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
PDGFRB-211ENST00000523456 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms