RNA–Protein interactions for RNA: ENST00000523015.1

DENND3-218, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-218ENST00000523015 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
DENND3-218ENST00000523015 DEPDC5O75140 1603 aa10.94□□□□□ -0.66
DENND3-218ENST00000523015 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
DENND3-218ENST00000523015 FMN1Q68DA7 1419 aa10.93□□□□□ -0.66
DENND3-218ENST00000523015 A2MP01023 1474 aa10.93□□□□□ -0.66
DENND3-218ENST00000523015 POTEAQ6S8J7 498 aa10.92□□□□□ -0.66
DENND3-218ENST00000523015 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
DENND3-218ENST00000523015 CDK11AQ9UQ88 783 aaPredicted RBP10.92□□□□□ -0.66
DENND3-218ENST00000523015 NPHP4O75161 1426 aaPredicted RBP10.92□□□□□ -0.66
DENND3-218ENST00000523015 ADGBQ8N7X0 1667 aa10.92□□□□□ -0.66
DENND3-218ENST00000523015 TNRQ92752 1358 aa10.9□□□□□ -0.67
DENND3-218ENST00000523015 SPAG9O60271 1321 aaKnown RBP10.89□□□□□ -0.67
DENND3-218ENST00000523015 XIRP1Q702N8 1843 aaKnown RBP10.89□□□□□ -0.67
DENND3-218ENST00000523015 MED14O60244 1454 aa10.89□□□□□ -0.67
DENND3-218ENST00000523015 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
DENND3-218ENST00000523015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.89□□□□□ -0.67
DENND3-218ENST00000523015 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
DENND3-218ENST00000523015 ARHGAP35Q9NRY4 1499 aa10.88□□□□□ -0.67
DENND3-218ENST00000523015 GGT6Q6P531 493 aa10.88□□□□□ -0.67
DENND3-218ENST00000523015 UGGT1Q9NYU2 1555 aa10.88□□□□□ -0.67
DENND3-218ENST00000523015 KDM5DQ9BY66 1539 aa10.88□□□□□ -0.67
DENND3-218ENST00000523015 PZPP20742 1482 aa10.87□□□□□ -0.67
DENND3-218ENST00000523015 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
DENND3-218ENST00000523015 FAM135AQ9P2D6 1515 aa10.86□□□□□ -0.67
DENND3-218ENST00000523015 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
DENND3-218ENST00000523015 EEA1Q15075 1411 aa10.85□□□□□ -0.67
DENND3-218ENST00000523015 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
DENND3-218ENST00000523015 ANKLE2Q86XL3 938 aa10.84□□□□□ -0.67
DENND3-218ENST00000523015 ZNF777Q9ULD5 760 aaPredicted RBP10.84□□□□□ -0.67
DENND3-218ENST00000523015 NLRP1Q9C000 1473 aa10.84□□□□□ -0.67
DENND3-218ENST00000523015 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
DENND3-218ENST00000523015 PLEKHH2Q8IVE3 1493 aa10.81□□□□□ -0.68
DENND3-218ENST00000523015 GPATCH8Q9UKJ3 1502 aaKnown RBP10.81□□□□□ -0.68
DENND3-218ENST00000523015 HNRNPMP52272 730 aaKnown RBP eCLIP10.81□□□□□ -0.68
DENND3-218ENST00000523015 KIAA1107Q9UPP5 1409 aa10.8□□□□□ -0.68
DENND3-218ENST00000523015 PHLPP1O60346 1717 aa10.79□□□□□ -0.68
DENND3-218ENST00000523015 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.68
DENND3-218ENST00000523015 UBR1Q8IWV7 1749 aa10.78□□□□□ -0.68
DENND3-218ENST00000523015 FAM135BQ49AJ0 1406 aa10.78□□□□□ -0.68
DENND3-218ENST00000523015 MIA2Q96PC5 1412 aa10.78□□□□□ -0.68
DENND3-218ENST00000523015 THEMISQ8N1K5 641 aaPredicted RBP10.78□□□□□ -0.68
DENND3-218ENST00000523015 SCAF11Q99590 1463 aaKnown RBP10.77□□□□□ -0.69
DENND3-218ENST00000523015 MAP3K1Q13233 1512 aa10.77□□□□□ -0.69
DENND3-218ENST00000523015 CASKIN1Q8WXD9 1431 aa10.76□□□□□ -0.69
DENND3-218ENST00000523015 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
DENND3-218ENST00000523015 LRP6O75581 1613 aa10.76□□□□□ -0.69
DENND3-218ENST00000523015 LRRC9Q6ZRR7 1453 aa10.75□□□□□ -0.69
DENND3-218ENST00000523015 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
DENND3-218ENST00000523015 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
DENND3-218ENST00000523015 COL16A1Q07092 1604 aaPredicted RBP10.74□□□□□ -0.69
DENND3-218ENST00000523015 TRIM52Q96A61 297 aa10.74□□□□□ -0.69
DENND3-218ENST00000523015 ERVK-7P63135 1459 aa10.74□□□□□ -0.69
DENND3-218ENST00000523015 DHX29Q7Z478 1369 aaKnown RBP10.73□□□□□ -0.69
DENND3-218ENST00000523015 ABCC3O15438 1527 aa10.73□□□□□ -0.69
DENND3-218ENST00000523015 EP400Q96L91 3159 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 RTEL1-TNFRSF6BF6WH68 1400 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 KIF3BO15066 747 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 SLIT1O75093 1534 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 CEP152O94986 1710 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.69
DENND3-218ENST00000523015 TMEM94Q12767 1356 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 NCOA2Q15596 1464 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 CCNB3Q8WWL7 1395 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 JCADQ9P266 1359 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 MBD5Q9P267 1494 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 CFDP1Q9UEE9 299 aaPredicted RBP10.71□□□□□ -0.69
DENND3-218ENST00000523015 WASHC2CQ9Y4E1 1318 aa10.71□□□□□ -0.69
DENND3-218ENST00000523015 ARHGAP23Q9P227 1491 aa10.7□□□□□ -0.7
DENND3-218ENST00000523015 SHPRHQ149N8 1683 aa10.69□□□□□ -0.7
DENND3-218ENST00000523015 NWD1Q149M9 1564 aa10.69□□□□□ -0.7
DENND3-218ENST00000523015 CCDC141Q6ZP82 1450 aa10.68□□□□□ -0.7
DENND3-218ENST00000523015 MROH1Q8NDA8 1641 aa10.68□□□□□ -0.7
DENND3-218ENST00000523015 CFAP65Q6ZU64 1925 aaKnown RBP10.68□□□□□ -0.7
DENND3-218ENST00000523015 CDK12Q9NYV4 1490 aaPredicted RBP10.68□□□□□ -0.7
DENND3-218ENST00000523015 ZNF644Q9H582 1327 aaPredicted RBP10.67□□□□□ -0.7
DENND3-218ENST00000523015 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
DENND3-218ENST00000523015 POTEDQ86YR6 584 aa10.67□□□□□ -0.7
DENND3-218ENST00000523015 PRDM15P57071 1507 aaPredicted RBP10.67□□□□□ -0.7
DENND3-218ENST00000523015 NKTRP30414 1462 aaKnown RBP10.67□□□□□ -0.7
DENND3-218ENST00000523015 KDM5AP29375 1690 aaKnown RBP10.66□□□□□ -0.7
DENND3-218ENST00000523015 PIK3C2BO00750 1634 aa10.66□□□□□ -0.7
DENND3-218ENST00000523015 RGS12O14924 1447 aa10.66□□□□□ -0.7
DENND3-218ENST00000523015 LTKP29376 864 aa10.65□□□□□ -0.7
DENND3-218ENST00000523015 ZNF772Q68DY9 489 aaPredicted RBP10.65□□□□□ -0.7
DENND3-218ENST00000523015 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
DENND3-218ENST00000523015 CAMSAP2Q08AD1 1489 aa10.65□□□□□ -0.7
DENND3-218ENST00000523015 EIF2AK4Q9P2K8 1649 aaKnown RBP10.65□□□□□ -0.7
DENND3-218ENST00000523015 FGD6Q6ZV73 1430 aa10.64□□□□□ -0.71
DENND3-218ENST00000523015 SETBP1Q9Y6X0 1596 aa10.64□□□□□ -0.71
DENND3-218ENST00000523015 MSH6P52701 1360 aa10.64□□□□□ -0.71
DENND3-218ENST00000523015 EHBP1L1Q8N3D4 1523 aa10.63□□□□□ -0.71
DENND3-218ENST00000523015 AHDC1Q5TGY3 1603 aaPredicted RBP10.63□□□□□ -0.71
DENND3-218ENST00000523015 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
DENND3-218ENST00000523015 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
DENND3-218ENST00000523015 RXRBP28702 533 aa10.62□□□□□ -0.71
DENND3-218ENST00000523015 TXNDC2Q86VQ3 553 aa10.62□□□□□ -0.71
DENND3-218ENST00000523015 ARHGEF5Q12774 1597 aa10.6□□□□□ -0.71
DENND3-218ENST00000523015 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
DENND3-218ENST00000523015 TMEM2Q9UHN6 1383 aa10.6□□□□□ -0.71
DENND3-218ENST00000523015 TET3O43151 1660 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms