RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 DMRT2Q9Y5R5 561 aa29.08■■■□□ 2.25
SPIDR-220ENST00000522900 KDM5DQ9BY66 1539 aa29.06■■■□□ 2.24
SPIDR-220ENST00000522900 DAPK1P53355 1430 aa29.06■■■□□ 2.24
SPIDR-220ENST00000522900 FBXO41Q8TF61 875 aa29.04■■■□□ 2.24
SPIDR-220ENST00000522900 CHIC2Q9UKJ5 165 aa29.04■■■□□ 2.24
SPIDR-220ENST00000522900 NCOA1Q15788 1441 aa29.03■■■□□ 2.24
SPIDR-220ENST00000522900 KIF15Q9NS87 1388 aa29.02■■■□□ 2.24
SPIDR-220ENST00000522900 SHANK2Q9UPX8 1470 aa29.02■■■□□ 2.24
SPIDR-220ENST00000522900 CAMSAP1Q5T5Y3 1602 aa29.01■■■□□ 2.23
SPIDR-220ENST00000522900 MYO3AQ8NEV4 1616 aa29.01■■■□□ 2.23
SPIDR-220ENST00000522900 DUOX2Q9NRD8 1548 aa29■■■□□ 2.23
SPIDR-220ENST00000522900 FAM135AQ9P2D6 1515 aa29■■■□□ 2.23
SPIDR-220ENST00000522900 NCKAP5LQ9HCH0 1330 aa29■■■□□ 2.23
SPIDR-220ENST00000522900 PZPP20742 1482 aa29■■■□□ 2.23
SPIDR-220ENST00000522900 DNMT1P26358 1616 aaKnown RBP28.99■■■□□ 2.23
SPIDR-220ENST00000522900 CERKQ8TCT0 537 aa28.99■■■□□ 2.23
SPIDR-220ENST00000522900 PTPRTO14522 1441 aa28.99■■■□□ 2.23
SPIDR-220ENST00000522900 TNRQ92752 1358 aa28.99■■■□□ 2.23
SPIDR-220ENST00000522900 RNF17Q9BXT8 1623 aaKnown RBP28.98■■■□□ 2.23
SPIDR-220ENST00000522900 FAM50AQ14320 339 aaKnown RBP28.98■■■□□ 2.23
SPIDR-220ENST00000522900 CROCC2H7BZ55 1655 aa28.98■■■□□ 2.23
SPIDR-220ENST00000522900 CEP170BQ9Y4F5 1589 aaPredicted RBP28.96■■■□□ 2.23
SPIDR-220ENST00000522900 EIF2AK4Q9P2K8 1649 aaKnown RBP28.96■■■□□ 2.23
SPIDR-220ENST00000522900 PPARGC1BQ86YN6 1023 aaKnown RBP28.95■■■□□ 2.22
SPIDR-220ENST00000522900 ABCC3O15438 1527 aa28.94■■■□□ 2.22
SPIDR-220ENST00000522900 MROH1Q8NDA8 1641 aa28.94■■■□□ 2.22
SPIDR-220ENST00000522900 ZNF142P52746 1687 aaPredicted RBP28.93■■■□□ 2.22
SPIDR-220ENST00000522900 A2ML1A8K2U0 1454 aa28.93■■■□□ 2.22
SPIDR-220ENST00000522900 ANKRD30AQ9BXX3 1397 aa28.92■■■□□ 2.22
SPIDR-220ENST00000522900 ERBINQ96RT1 1412 aa28.91■■■□□ 2.22
SPIDR-220ENST00000522900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.9■■■□□ 2.224e-6■■■□□ 16.3
SPIDR-220ENST00000522900 PLA2R1Q13018 1463 aa28.89■■■□□ 2.22
SPIDR-220ENST00000522900 PKD2Q13563 968 aa28.88■■■□□ 2.21
SPIDR-220ENST00000522900 ZC3H13Q5T200 1668 aaKnown RBP28.83■■■□□ 2.21
SPIDR-220ENST00000522900 ADGRL2O95490 1459 aa28.82■■■□□ 2.2
SPIDR-220ENST00000522900 CEP152O94986 1710 aa28.81■■■□□ 2.2
SPIDR-220ENST00000522900 PRDM15P57071 1507 aaPredicted RBP28.81■■■□□ 2.2
SPIDR-220ENST00000522900 NLRP1Q9C000 1473 aa28.81■■■□□ 2.2
SPIDR-220ENST00000522900 ERVK-7P63135 1459 aa28.8■■■□□ 2.2
SPIDR-220ENST00000522900 SPATA31D1Q6ZQQ2 1576 aa28.79■■■□□ 2.2
SPIDR-220ENST00000522900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.79■■■□□ 2.2
SPIDR-220ENST00000522900 THEMISQ8N1K5 641 aaPredicted RBP28.79■■■□□ 2.2
SPIDR-220ENST00000522900 LTBP4Q8N2S1 1624 aa28.77■■■□□ 2.2
SPIDR-220ENST00000522900 ZNF335Q9H4Z2 1342 aaPredicted RBP28.77■■■□□ 2.2
SPIDR-220ENST00000522900 ARHGAP31Q2M1Z3 1444 aa28.76■■■□□ 2.19
SPIDR-220ENST00000522900 KANK1Q14678 1352 aa28.75■■■□□ 2.19
SPIDR-220ENST00000522900 DEPDC5O75140 1603 aa28.75■■■□□ 2.19
SPIDR-220ENST00000522900 UGGT1Q9NYU2 1555 aa28.75■■■□□ 2.19
SPIDR-220ENST00000522900 ANKLE2Q86XL3 938 aa28.73■■■□□ 2.19
SPIDR-220ENST00000522900 ANKRD50Q9ULJ7 1429 aa28.72■■■□□ 2.19
SPIDR-220ENST00000522900 ITGAEP38570 1179 aa28.7■■■□□ 2.18
SPIDR-220ENST00000522900 CFAP65Q6ZU64 1925 aaKnown RBP28.69■■■□□ 2.18
SPIDR-220ENST00000522900 VWDEQ8N2E2 1590 aa28.69■■■□□ 2.18
SPIDR-220ENST00000522900 LMTK2Q8IWU2 1503 aa28.68■■■□□ 2.18
SPIDR-220ENST00000522900 NEURL4Q96JN8 1562 aa28.67■■■□□ 2.18
SPIDR-220ENST00000522900 ROCK1Q13464 1354 aa28.62■■■□□ 2.17
SPIDR-220ENST00000522900 POLR1AO95602 1720 aaPredicted RBP28.61■■■□□ 2.17
SPIDR-220ENST00000522900 NPHP4O75161 1426 aaPredicted RBP28.6■■■□□ 2.17
SPIDR-220ENST00000522900 IDI1Q13907 227 aa28.6■■■□□ 2.17
SPIDR-220ENST00000522900 MED14O60244 1454 aa28.59■■■□□ 2.17
SPIDR-220ENST00000522900 LTKP29376 864 aa28.57■■■□□ 2.16
SPIDR-220ENST00000522900 UBR1Q8IWV7 1749 aa28.57■■■□□ 2.16
SPIDR-220ENST00000522900 EFCAB6Q5THR3 1501 aa28.56■■■□□ 2.16
SPIDR-220ENST00000522900 IQSEC2Q5JU85 1478 aa28.55■■■□□ 2.16
SPIDR-220ENST00000522900 NOS1P29475 1434 aa28.55■■■□□ 2.16
SPIDR-220ENST00000522900 TXNDC2Q86VQ3 553 aa28.54■■■□□ 2.16
SPIDR-220ENST00000522900 STAG3Q9UJ98 1225 aa28.53■■■□□ 2.16
SPIDR-220ENST00000522900 PIK3C2BO00750 1634 aa28.52■■■□□ 2.16
SPIDR-220ENST00000522900 SYNMO15061 1565 aa28.52■■■□□ 2.16
SPIDR-220ENST00000522900 ARHGAP23Q9P227 1491 aa28.52■■■□□ 2.16
SPIDR-220ENST00000522900 RRBP1Q9P2E9 1410 aaKnown RBP28.51■■■□□ 2.15
SPIDR-220ENST00000522900 SLIT1O75093 1534 aa28.49■■■□□ 2.15
SPIDR-220ENST00000522900 TMEM2Q9UHN6 1383 aa28.49■■■□□ 2.15
SPIDR-220ENST00000522900 SCAF11Q99590 1463 aaKnown RBP28.48■■■□□ 2.15
SPIDR-220ENST00000522900 UNC13BO14795 1591 aa28.48■■■□□ 2.15
SPIDR-220ENST00000522900 UBAP1LF5GYI3 381 aa28.47■■■□□ 2.15
SPIDR-220ENST00000522900 SLC52A1Q9NWF4 448 aa28.47■■■□□ 2.15
SPIDR-220ENST00000522900 EID1Q9Y6B2 187 aa28.47■■■□□ 2.15
SPIDR-220ENST00000522900 IQGAP1P46940 1657 aa28.47■■■□□ 2.15
SPIDR-220ENST00000522900 RPRD2Q5VT52 1461 aaKnown RBP28.46■■■□□ 2.15
SPIDR-220ENST00000522900 NUP155O75694 1391 aa28.45■■■□□ 2.14
SPIDR-220ENST00000522900 TET3O43151 1660 aa28.44■■■□□ 2.14
SPIDR-220ENST00000522900 CPS1P31327 1500 aa28.43■■■□□ 2.14
SPIDR-220ENST00000522900 IQGAP3Q86VI3 1631 aa28.37■■■□□ 2.13
SPIDR-220ENST00000522900 ADGRB3O60242 1522 aa28.37■■■□□ 2.13
SPIDR-220ENST00000522900 KDM5AP29375 1690 aaKnown RBP28.36■■■□□ 2.13
SPIDR-220ENST00000522900 GCC2Q8IWJ2 1684 aa28.36■■■□□ 2.13
SPIDR-220ENST00000522900 E9PCH4 1651 aa28.35■■■□□ 2.13
SPIDR-220ENST00000522900 STRCP1A6NGW2 1772 aa28.34■■■□□ 2.13
SPIDR-220ENST00000522900 NAIPQ13075 1403 aa28.34■■■□□ 2.13
SPIDR-220ENST00000522900 CHGAP10645 457 aaKnown RBP28.32■■■□□ 2.12
SPIDR-220ENST00000522900 SLC26A8Q96RN1 970 aa28.32■■■□□ 2.12
SPIDR-220ENST00000522900 SENP3Q9H4L4 574 aaPredicted RBP28.32■■■□□ 2.12
SPIDR-220ENST00000522900 LRRC7Q96NW7 1537 aa28.3■■■□□ 2.12
SPIDR-220ENST00000522900 TOM1O60784 492 aa28.29■■■□□ 2.12
SPIDR-220ENST00000522900 PIP4K2BP78356 416 aa28.29■■■□□ 2.12
SPIDR-220ENST00000522900 TMEM131LA2VDJ0 1609 aa28.27■■■□□ 2.12
SPIDR-220ENST00000522900 ZFYVE9O95405 1425 aa28.26■■■□□ 2.12
SPIDR-220ENST00000522900 RIMS2Q9UQ26 1411 aa28.26■■■□□ 2.12
SPIDR-220ENST00000522900 SCAF1Q9H7N4 1312 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms