RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 HECW2Q9P2P5 1572 aa11.67□□□□□ -0.54
VPS13B-211ENST00000522802 ADGRL1O94910 1474 aa11.67□□□□□ -0.54
VPS13B-211ENST00000522802 PPRC1Q5VV67 1664 aaKnown RBP11.66□□□□□ -0.54
VPS13B-211ENST00000522802 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
VPS13B-211ENST00000522802 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
VPS13B-211ENST00000522802 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
VPS13B-211ENST00000522802 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
VPS13B-211ENST00000522802 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
VPS13B-211ENST00000522802 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
VPS13B-211ENST00000522802 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
VPS13B-211ENST00000522802 CUL7Q14999 1698 aa11.55□□□□□ -0.56
VPS13B-211ENST00000522802 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
VPS13B-211ENST00000522802 GLI2P10070 1586 aa11.54□□□□□ -0.56
VPS13B-211ENST00000522802 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
VPS13B-211ENST00000522802 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
VPS13B-211ENST00000522802 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
VPS13B-211ENST00000522802 SNPHO15079 494 aa11.53□□□□□ -0.56
VPS13B-211ENST00000522802 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
VPS13B-211ENST00000522802 ABCC2Q92887 1545 aa11.53□□□□□ -0.56
VPS13B-211ENST00000522802 KIAA0586Q9BVV6 1533 aa11.53□□□□□ -0.56
VPS13B-211ENST00000522802 MAP3K4Q9Y6R4 1608 aa11.53□□□□□ -0.56
VPS13B-211ENST00000522802 ASXL2Q76L83 1435 aa11.52□□□□□ -0.56
VPS13B-211ENST00000522802 SPNS2Q8IVW8 549 aa11.49□□□□□ -0.57
VPS13B-211ENST00000522802 MMRN1Q13201 1228 aa11.48□□□□□ -0.57
VPS13B-211ENST00000522802 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
VPS13B-211ENST00000522802 PTPRGP23470 1445 aa11.47□□□□□ -0.57
VPS13B-211ENST00000522802 G3V3G9 751 aa11.47□□□□□ -0.57
VPS13B-211ENST00000522802 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
VPS13B-211ENST00000522802 EPRSP07814 1512 aaKnown RBP11.46□□□□□ -0.57
VPS13B-211ENST00000522802 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
VPS13B-211ENST00000522802 TTBK1Q5TCY1 1321 aaPredicted RBP11.45□□□□□ -0.58
VPS13B-211ENST00000522802 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
VPS13B-211ENST00000522802 ZCCHC11Q5TAX3 1644 aaKnown RBP11.45□□□□□ -0.58
VPS13B-211ENST00000522802 UHRF1BP1LA0JNW5 1464 aa11.44□□□□□ -0.58
VPS13B-211ENST00000522802 PDE4AP27815 886 aa11.44□□□□□ -0.58
VPS13B-211ENST00000522802 KIF21BO75037 1637 aa11.44□□□□□ -0.58
VPS13B-211ENST00000522802 TEX14Q8IWB6 1497 aa11.43□□□□□ -0.58
VPS13B-211ENST00000522802 TNIKQ9UKE5 1360 aa11.42□□□□□ -0.58
VPS13B-211ENST00000522802 IQGAP2Q13576 1575 aa11.42□□□□□ -0.58
VPS13B-211ENST00000522802 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
VPS13B-211ENST00000522802 IGF1RP08069 1367 aa11.41□□□□□ -0.58
VPS13B-211ENST00000522802 KDM5BQ9UGL1 1544 aa11.4□□□□□ -0.58
VPS13B-211ENST00000522802 EMP3P54852 163 aa11.4□□□□□ -0.58
VPS13B-211ENST00000522802 FBXO41Q8TF61 875 aa11.4□□□□□ -0.58
VPS13B-211ENST00000522802 DISP1Q96F81 1524 aa11.4□□□□□ -0.59
VPS13B-211ENST00000522802 MFSD10Q14728 455 aa11.39□□□□□ -0.59
VPS13B-211ENST00000522802 CARMIL2Q6F5E8 1435 aa11.39□□□□□ -0.59
VPS13B-211ENST00000522802 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
VPS13B-211ENST00000522802 UACAQ9BZF9 1416 aa11.39□□□□□ -0.59
VPS13B-211ENST00000522802 KIF3CO14782 793 aa11.38□□□□□ -0.59
VPS13B-211ENST00000522802 TMEM92Q6UXU6 159 aa11.38□□□□□ -0.59
VPS13B-211ENST00000522802 POTEB3A0JP26 581 aa11.37□□□□□ -0.59
VPS13B-211ENST00000522802 POTEBQ6S5H4 581 aa11.37□□□□□ -0.59
VPS13B-211ENST00000522802 WDR70Q9NW82 654 aa11.37□□□□□ -0.59
VPS13B-211ENST00000522802 SUPT5HO00267 1087 aaKnown RBP11.36□□□□□ -0.59
VPS13B-211ENST00000522802 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
VPS13B-211ENST00000522802 KIAA0556O60303 1618 aa11.35□□□□□ -0.59
VPS13B-211ENST00000522802 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
VPS13B-211ENST00000522802 TMC2Q8TDI7 906 aa11.35□□□□□ -0.59
VPS13B-211ENST00000522802 WDR7Q9Y4E6 1490 aa11.35□□□□□ -0.59
VPS13B-211ENST00000522802 CFAP43Q8NDM7 1665 aa11.34□□□□□ -0.59
VPS13B-211ENST00000522802 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
VPS13B-211ENST00000522802 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
VPS13B-211ENST00000522802 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
VPS13B-211ENST00000522802 FOXK1P85037 733 aa11.33□□□□□ -0.6
VPS13B-211ENST00000522802 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
VPS13B-211ENST00000522802 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
VPS13B-211ENST00000522802 DSG2Q14126 1118 aa11.32□□□□□ -0.6
VPS13B-211ENST00000522802 ADAMTSL3P82987 1691 aa11.32□□□□□ -0.6
VPS13B-211ENST00000522802 MAGI3Q5TCQ9 1506 aa11.31□□□□□ -0.6
VPS13B-211ENST00000522802 UGGT2Q9NYU1 1516 aa11.31□□□□□ -0.6
VPS13B-211ENST00000522802 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
VPS13B-211ENST00000522802 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
VPS13B-211ENST00000522802 PTPRMP28827 1452 aa11.3□□□□□ -0.6
VPS13B-211ENST00000522802 PCF11O94913 1555 aaKnown RBP11.29□□□□□ -0.6
VPS13B-211ENST00000522802 LMTK3Q96Q04 1460 aa11.29□□□□□ -0.6
VPS13B-211ENST00000522802 E2F4Q16254 413 aa11.28□□□□□ -0.6
VPS13B-211ENST00000522802 MADDQ8WXG6 1647 aa11.27□□□□□ -0.6
VPS13B-211ENST00000522802 CD109Q6YHK3 1445 aa11.27□□□□□ -0.6
VPS13B-211ENST00000522802 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
VPS13B-211ENST00000522802 PLPP6Q8IY26 295 aa11.26□□□□□ -0.61
VPS13B-211ENST00000522802 BCORL1Q5H9F3 1711 aa11.26□□□□□ -0.61
VPS13B-211ENST00000522802 ABCA8O94911 1581 aa11.25□□□□□ -0.61
VPS13B-211ENST00000522802 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
VPS13B-211ENST00000522802 KCNV2Q8TDN2 545 aa11.25□□□□□ -0.61
VPS13B-211ENST00000522802 P3H3Q8IVL6 736 aa11.24□□□□□ -0.61
VPS13B-211ENST00000522802 ARAP3Q8WWN8 1544 aa11.24□□□□□ -0.61
VPS13B-211ENST00000522802 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
VPS13B-211ENST00000522802 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
VPS13B-211ENST00000522802 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
VPS13B-211ENST00000522802 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
VPS13B-211ENST00000522802 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
VPS13B-211ENST00000522802 ABCA9Q8IUA7 1624 aa11.2□□□□□ -0.62
VPS13B-211ENST00000522802 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
VPS13B-211ENST00000522802 EMILIN3Q9NT22 766 aa11.19□□□□□ -0.62
VPS13B-211ENST00000522802 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
VPS13B-211ENST00000522802 ARHGEF40Q8TER5 1519 aa11.18□□□□□ -0.62
VPS13B-211ENST00000522802 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
VPS13B-211ENST00000522802 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
VPS13B-211ENST00000522802 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms