RNA–Protein interactions for RNA: ENST00000522709.5

EFR3A-206, Transcript of EFR3 homolog A, humanhuman

TSL 5

Gene EFR3A, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-206ENST00000522709 FBXO31Q5XUX0 539 aaPredicted RBP29.63■■■□□ 2.33
EFR3A-206ENST00000522709 TNRQ92752 1358 aa29.61■■■□□ 2.33
EFR3A-206ENST00000522709 CCDC141Q6ZP82 1450 aa29.6■■■□□ 2.33
EFR3A-206ENST00000522709 KDM5DQ9BY66 1539 aa29.59■■■□□ 2.33
EFR3A-206ENST00000522709 POLR1AO95602 1720 aaPredicted RBP29.59■■■□□ 2.33
EFR3A-206ENST00000522709 CAMSAP2Q08AD1 1489 aa29.58■■■□□ 2.33
EFR3A-206ENST00000522709 PZPP20742 1482 aa29.57■■■□□ 2.32
EFR3A-206ENST00000522709 NEURL4Q96JN8 1562 aa29.56■■■□□ 2.32
EFR3A-206ENST00000522709 SCAF1Q9H7N4 1312 aaKnown RBP29.55■■■□□ 2.32
EFR3A-206ENST00000522709 NCOA2Q15596 1464 aa29.55■■■□□ 2.32
EFR3A-206ENST00000522709 WASHC2CQ9Y4E1 1318 aa29.54■■■□□ 2.32
EFR3A-206ENST00000522709 PIP4K2BP78356 416 aa29.52■■■□□ 2.32
EFR3A-206ENST00000522709 FAM135AQ9P2D6 1515 aa29.51■■■□□ 2.32
EFR3A-206ENST00000522709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.51■■■□□ 2.31
EFR3A-206ENST00000522709 CPS1P31327 1500 aa29.5■■■□□ 2.31
EFR3A-206ENST00000522709 SHANK2Q9UPX8 1470 aa29.49■■■□□ 2.31
EFR3A-206ENST00000522709 RSPH4AQ5TD94 716 aa29.49■■■□□ 2.31
EFR3A-206ENST00000522709 HSPA1LP34931 641 aa29.47■■■□□ 2.31
EFR3A-206ENST00000522709 ANKLE2Q86XL3 938 aa29.47■■■□□ 2.31
EFR3A-206ENST00000522709 MIA2Q96PC5 1412 aa29.46■■■□□ 2.31
EFR3A-206ENST00000522709 TOM1O60784 492 aa29.45■■■□□ 2.31
EFR3A-206ENST00000522709 UGGT1Q9NYU2 1555 aa29.44■■■□□ 2.3
EFR3A-206ENST00000522709 NLRP1Q9C000 1473 aa29.44■■■□□ 2.3
EFR3A-206ENST00000522709 THEMISQ8N1K5 641 aaPredicted RBP29.44■■■□□ 2.3
EFR3A-206ENST00000522709 ARHGEF5Q12774 1597 aa29.43■■■□□ 2.3
EFR3A-206ENST00000522709 TSPY4P0CV99 314 aa29.43■■■□□ 2.3
EFR3A-206ENST00000522709 TSPY10P0CW01 314 aa29.43■■■□□ 2.3
EFR3A-206ENST00000522709 VWDEQ8N2E2 1590 aa29.43■■■□□ 2.3
EFR3A-206ENST00000522709 NPHP4O75161 1426 aaPredicted RBP29.4■■■□□ 2.3
EFR3A-206ENST00000522709 MED1Q15648 1581 aaPredicted RBP29.39■■■□□ 2.3
EFR3A-206ENST00000522709 DEPDC5O75140 1603 aa29.38■■■□□ 2.29
EFR3A-206ENST00000522709 MED14O60244 1454 aa29.37■■■□□ 2.29
EFR3A-206ENST00000522709 RNF17Q9BXT8 1623 aaKnown RBP29.35■■■□□ 2.29
EFR3A-206ENST00000522709 ABCC3O15438 1527 aa29.34■■■□□ 2.29
EFR3A-206ENST00000522709 IQGAP1P46940 1657 aa29.34■■■□□ 2.29
EFR3A-206ENST00000522709 ZC3H13Q5T200 1668 aaKnown RBP29.31■■■□□ 2.28
EFR3A-206ENST00000522709 ALKQ9UM73 1620 aa29.31■■■□□ 2.28
EFR3A-206ENST00000522709 MAST1Q9Y2H9 1570 aa29.3■■■□□ 2.28
EFR3A-206ENST00000522709 LRRC9Q6ZRR7 1453 aa29.3■■■□□ 2.28
EFR3A-206ENST00000522709 ERVK-7P63135 1459 aa29.29■■■□□ 2.28
EFR3A-206ENST00000522709 EIF2AK4Q9P2K8 1649 aaKnown RBP29.27■■■□□ 2.28
EFR3A-206ENST00000522709 STRCP1A6NGW2 1772 aa29.26■■■□□ 2.28
EFR3A-206ENST00000522709 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
EFR3A-206ENST00000522709 MROH1Q8NDA8 1641 aa29.25■■■□□ 2.27
EFR3A-206ENST00000522709 CEP152O94986 1710 aa29.24■■■□□ 2.27
EFR3A-206ENST00000522709 VPS8Q8N3P4 1428 aa29.24■■■□□ 2.27
EFR3A-206ENST00000522709 LRRC7Q96NW7 1537 aa29.23■■■□□ 2.27
EFR3A-206ENST00000522709 KANK4Q5T7N3 995 aaPredicted RBP29.21■■■□□ 2.27
EFR3A-206ENST00000522709 PHF23Q9BUL5 403 aaPredicted RBP29.2■■■□□ 2.26
EFR3A-206ENST00000522709 UBR1Q8IWV7 1749 aa29.2■■■□□ 2.26
EFR3A-206ENST00000522709 SYNMO15061 1565 aa29.19■■■□□ 2.26
EFR3A-206ENST00000522709 CFAP65Q6ZU64 1925 aaKnown RBP29.19■■■□□ 2.26
EFR3A-206ENST00000522709 MYOM3Q5VTT5 1437 aa29.17■■■□□ 2.26
EFR3A-206ENST00000522709 DUOX2Q9NRD8 1548 aa29.16■■■□□ 2.26
EFR3A-206ENST00000522709 SCAF11Q99590 1463 aaKnown RBP29.15■■■□□ 2.26
EFR3A-206ENST00000522709 LOC105371045A0A1W2PR82 267 aa29.12■■■□□ 2.25
EFR3A-206ENST00000522709 LTKP29376 864 aa29.11■■■□□ 2.25
EFR3A-206ENST00000522709 TXNDC2Q86VQ3 553 aa29.1■■■□□ 2.25
EFR3A-206ENST00000522709 MAP3K1Q13233 1512 aa29.1■■■□□ 2.25
EFR3A-206ENST00000522709 KIF15Q9NS87 1388 aa29.09■■■□□ 2.25
EFR3A-206ENST00000522709 ARHGAP23Q9P227 1491 aa29.09■■■□□ 2.25
EFR3A-206ENST00000522709 SLIT1O75093 1534 aa29.08■■■□□ 2.25
EFR3A-206ENST00000522709 PRDM15P57071 1507 aaPredicted RBP29.08■■■□□ 2.25
EFR3A-206ENST00000522709 RRP7BPQ9NSQ0 103 aa29.07■■■□□ 2.24
EFR3A-206ENST00000522709 ARHGAP31Q2M1Z3 1444 aa29.06■■■□□ 2.24
EFR3A-206ENST00000522709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.05■■■□□ 2.24
EFR3A-206ENST00000522709 CROCC2H7BZ55 1655 aa29.05■■■□□ 2.24
EFR3A-206ENST00000522709 ERBINQ96RT1 1412 aa29.04■■■□□ 2.24
EFR3A-206ENST00000522709 EID1Q9Y6B2 187 aa29.03■■■□□ 2.24
EFR3A-206ENST00000522709 ABCC5O15440 1437 aa29.03■■■□□ 2.24
EFR3A-206ENST00000522709 PIK3C2BO00750 1634 aa29.02■■■□□ 2.24
EFR3A-206ENST00000522709 XIRP1Q702N8 1843 aaKnown RBP29.01■■■□□ 2.24
EFR3A-206ENST00000522709 PTPN23Q9H3S7 1636 aa28.99■■■□□ 2.23
EFR3A-206ENST00000522709 STAG3Q9UJ98 1225 aa28.98■■■□□ 2.23
EFR3A-206ENST00000522709 TMEM2Q9UHN6 1383 aa28.97■■■□□ 2.23
EFR3A-206ENST00000522709 DAPK1P53355 1430 aa28.95■■■□□ 2.23
EFR3A-206ENST00000522709 KANK1Q14678 1352 aa28.95■■■□□ 2.22
EFR3A-206ENST00000522709 EFCAB6Q5THR3 1501 aa28.92■■■□□ 2.22
EFR3A-206ENST00000522709 RGS17Q9UGC6 210 aaPredicted RBP28.91■■■□□ 2.22
EFR3A-206ENST00000522709 CHIC2Q9UKJ5 165 aa28.91■■■□□ 2.22
EFR3A-206ENST00000522709 IDI1Q13907 227 aa28.9■■■□□ 2.22
EFR3A-206ENST00000522709 TMEM94Q12767 1356 aa28.88■■■□□ 2.21
EFR3A-206ENST00000522709 LMTK2Q8IWU2 1503 aa28.88■■■□□ 2.21
EFR3A-206ENST00000522709 KDM5AP29375 1690 aaKnown RBP28.87■■■□□ 2.21
EFR3A-206ENST00000522709 APLP2Q06481 763 aa28.87■■■□□ 2.21
EFR3A-206ENST00000522709 SLC26A8Q96RN1 970 aa28.87■■■□□ 2.21
EFR3A-206ENST00000522709 FAM135BQ49AJ0 1406 aa28.86■■■□□ 2.21
EFR3A-206ENST00000522709 FGD6Q6ZV73 1430 aa28.86■■■□□ 2.21
EFR3A-206ENST00000522709 RBM33Q96EV2 1170 aaKnown RBP28.86■■■□□ 2.21
EFR3A-206ENST00000522709 ANKRD30AQ9BXX3 1397 aa28.86■■■□□ 2.21
EFR3A-206ENST00000522709 KCNA6P17658 529 aa28.85■■■□□ 2.21
EFR3A-206ENST00000522709 TET3O43151 1660 aa28.83■■■□□ 2.21
EFR3A-206ENST00000522709 PROSER2Q86WR7 435 aaPredicted RBP28.82■■■□□ 2.2
EFR3A-206ENST00000522709 ROBO1Q9Y6N7 1651 aa28.81■■■□□ 2.2
EFR3A-206ENST00000522709 ADGRB3O60242 1522 aa28.81■■■□□ 2.2
EFR3A-206ENST00000522709 NOS1P29475 1434 aa28.8■■■□□ 2.2
EFR3A-206ENST00000522709 BCANQ96GW7 911 aa28.78■■■□□ 2.2
EFR3A-206ENST00000522709 NWD1Q149M9 1564 aa28.75■■■□□ 2.19
EFR3A-206ENST00000522709 NKTRP30414 1462 aaKnown RBP28.74■■■□□ 2.19
EFR3A-206ENST00000522709 POTEAQ6S8J7 498 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms