RNA–Protein interactions for RNA: ENST00000522642.1

GINS4-208, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 390 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-208ENST00000522642 FMN1Q68DA7 1419 aa11.97□□□□□ -0.49
GINS4-208ENST00000522642 ZNF777Q9ULD5 760 aaPredicted RBP11.97□□□□□ -0.49
GINS4-208ENST00000522642 NLRP1Q9C000 1473 aa11.96□□□□□ -0.49
GINS4-208ENST00000522642 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.49
GINS4-208ENST00000522642 UGGT1Q9NYU2 1555 aa11.95□□□□□ -0.5
GINS4-208ENST00000522642 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
GINS4-208ENST00000522642 SPATA31A6Q5VVP1 1343 aa11.94□□□□□ -0.5
GINS4-208ENST00000522642 KDM5DQ9BY66 1539 aa11.94□□□□□ -0.5
GINS4-208ENST00000522642 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
GINS4-208ENST00000522642 IQGAP1P46940 1657 aa11.94□□□□□ -0.5
GINS4-208ENST00000522642 SAMD9LQ8IVG5 1584 aa11.93□□□□□ -0.5
GINS4-208ENST00000522642 LRRC9Q6ZRR7 1453 aa11.92□□□□□ -0.5
GINS4-208ENST00000522642 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
GINS4-208ENST00000522642 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.5
GINS4-208ENST00000522642 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
GINS4-208ENST00000522642 WASHC2CQ9Y4E1 1318 aa11.91□□□□□ -0.5
GINS4-208ENST00000522642 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
GINS4-208ENST00000522642 PZPP20742 1482 aa11.9□□□□□ -0.5
GINS4-208ENST00000522642 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
GINS4-208ENST00000522642 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
GINS4-208ENST00000522642 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
GINS4-208ENST00000522642 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
GINS4-208ENST00000522642 NUTM2BA6NNL0 878 aaPredicted RBP11.88□□□□□ -0.51
GINS4-208ENST00000522642 NUTM2EB1AL46 878 aaPredicted RBP11.88□□□□□ -0.51
GINS4-208ENST00000522642 NUTM2DQ5VT03 806 aaPredicted RBP11.88□□□□□ -0.51
GINS4-208ENST00000522642 NUTM2AQ8IVF1 878 aaPredicted RBP11.88□□□□□ -0.51
GINS4-208ENST00000522642 KIAA1107Q9UPP5 1409 aa11.87□□□□□ -0.51
GINS4-208ENST00000522642 KIF3BO15066 747 aa11.87□□□□□ -0.51
GINS4-208ENST00000522642 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
GINS4-208ENST00000522642 RBM33Q96EV2 1170 aaKnown RBP11.87□□□□□ -0.51
GINS4-208ENST00000522642 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
GINS4-208ENST00000522642 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
GINS4-208ENST00000522642 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
GINS4-208ENST00000522642 TMEM94Q12767 1356 aa11.86□□□□□ -0.51
GINS4-208ENST00000522642 FGD6Q6ZV73 1430 aa11.86□□□□□ -0.51
GINS4-208ENST00000522642 ROBO1Q9Y6N7 1651 aa11.85□□□□□ -0.51
GINS4-208ENST00000522642 MSH6P52701 1360 aa11.85□□□□□ -0.51
GINS4-208ENST00000522642 CFDP1Q9UEE9 299 aaPredicted RBP11.85□□□□□ -0.51
GINS4-208ENST00000522642 DHX29Q7Z478 1369 aaKnown RBP11.84□□□□□ -0.51
GINS4-208ENST00000522642 SYCP2Q9BX26 1530 aa11.84□□□□□ -0.51
GINS4-208ENST00000522642 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
GINS4-208ENST00000522642 KCNA6P17658 529 aa11.83□□□□□ -0.52
GINS4-208ENST00000522642 RBM6P78332 1123 aaKnown RBP11.83□□□□□ -0.52
GINS4-208ENST00000522642 NGLY1Q96IV0 654 aa11.83□□□□□ -0.52
GINS4-208ENST00000522642 ADGBQ8N7X0 1667 aa11.83□□□□□ -0.52
GINS4-208ENST00000522642 ATAD2Q6PL18 1390 aa11.82□□□□□ -0.52
GINS4-208ENST00000522642 CCDC125Q86Z20 511 aa11.82□□□□□ -0.52
GINS4-208ENST00000522642 EEA1Q15075 1411 aa11.82□□□□□ -0.52
GINS4-208ENST00000522642 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
GINS4-208ENST00000522642 INO80Q9ULG1 1556 aaPredicted RBP11.81□□□□□ -0.52
GINS4-208ENST00000522642 CHIC1Q5VXU3 224 aa11.81□□□□□ -0.52
GINS4-208ENST00000522642 RTEL1-TNFRSF6BF6WH68 1400 aa11.8□□□□□ -0.52
GINS4-208ENST00000522642 QTRT2Q9H974 415 aaKnown RBP11.8□□□□□ -0.52
GINS4-208ENST00000522642 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
GINS4-208ENST00000522642 AFF2P51816 1311 aa11.79□□□□□ -0.52
GINS4-208ENST00000522642 LTKP29376 864 aa11.78□□□□□ -0.52
GINS4-208ENST00000522642 ZC3H13Q5T200 1668 aaKnown RBP11.78□□□□□ -0.52
GINS4-208ENST00000522642 UBTFP17480 764 aaKnown RBP11.77□□□□□ -0.53
GINS4-208ENST00000522642 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
GINS4-208ENST00000522642 LRP6O75581 1613 aa11.77□□□□□ -0.53
GINS4-208ENST00000522642 CDC42BPAQ5VT25 1732 aa11.77□□□□□ -0.53
GINS4-208ENST00000522642 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
GINS4-208ENST00000522642 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
GINS4-208ENST00000522642 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
GINS4-208ENST00000522642 ABCC3O15438 1527 aa11.75□□□□□ -0.53
GINS4-208ENST00000522642 RSPH4AQ5TD94 716 aa11.74□□□□□ -0.53
GINS4-208ENST00000522642 RGS12O14924 1447 aa11.74□□□□□ -0.53
GINS4-208ENST00000522642 SETBP1Q9Y6X0 1596 aa11.74□□□□□ -0.53
GINS4-208ENST00000522642 PRDM15P57071 1507 aaPredicted RBP11.73□□□□□ -0.53
GINS4-208ENST00000522642 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
GINS4-208ENST00000522642 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
GINS4-208ENST00000522642 BCANQ96GW7 911 aa11.73□□□□□ -0.53
GINS4-208ENST00000522642 COL16A1Q07092 1604 aaPredicted RBP11.72□□□□□ -0.53
GINS4-208ENST00000522642 SLIT1O75093 1534 aa11.72□□□□□ -0.53
GINS4-208ENST00000522642 NKTRP30414 1462 aaKnown RBP11.72□□□□□ -0.53
GINS4-208ENST00000522642 ARHGAP23Q9P227 1491 aa11.72□□□□□ -0.53
GINS4-208ENST00000522642 MAP3K1Q13233 1512 aa11.71□□□□□ -0.53
GINS4-208ENST00000522642 ATF3P18847 181 aa11.71□□□□□ -0.53
GINS4-208ENST00000522642 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
GINS4-208ENST00000522642 C8orf37Q96NL8 207 aa11.71□□□□□ -0.53
GINS4-208ENST00000522642 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
GINS4-208ENST00000522642 SLC26A8Q96RN1 970 aa11.7□□□□□ -0.54
GINS4-208ENST00000522642 ERVK-7P63135 1459 aa11.7□□□□□ -0.54
GINS4-208ENST00000522642 TMEM2Q9UHN6 1383 aa11.69□□□□□ -0.54
GINS4-208ENST00000522642 SHPRHQ149N8 1683 aa11.69□□□□□ -0.54
GINS4-208ENST00000522642 NCOA2Q15596 1464 aa11.69□□□□□ -0.54
GINS4-208ENST00000522642 CASKIN1Q8WXD9 1431 aa11.69□□□□□ -0.54
GINS4-208ENST00000522642 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
GINS4-208ENST00000522642 TSPY4P0CV99 314 aa11.68□□□□□ -0.54
GINS4-208ENST00000522642 TSPY10P0CW01 314 aa11.68□□□□□ -0.54
GINS4-208ENST00000522642 LRRC59Q96AG4 307 aaKnown RBP11.68□□□□□ -0.54
GINS4-208ENST00000522642 TIAM1Q13009 1591 aa11.67□□□□□ -0.54
GINS4-208ENST00000522642 UBR1Q8IWV7 1749 aa11.67□□□□□ -0.54
GINS4-208ENST00000522642 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
GINS4-208ENST00000522642 TRPC5Q9UL62 973 aaPredicted RBP11.67□□□□□ -0.54
GINS4-208ENST00000522642 YY1P25490 414 aa11.66□□□□□ -0.54
GINS4-208ENST00000522642 C19orf44Q9H6X5 657 aa11.66□□□□□ -0.54
GINS4-208ENST00000522642 AHDC1Q5TGY3 1603 aaPredicted RBP11.65□□□□□ -0.54
GINS4-208ENST00000522642 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
GINS4-208ENST00000522642 MBD5Q9P267 1494 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms