RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 DNMT1P26358 1616 aaKnown RBP24.5■■□□□ 1.51
TRAPPC9-213ENST00000522504 UBAP1LF5GYI3 381 aa24.49■■□□□ 1.51
TRAPPC9-213ENST00000522504 SPATA31D1Q6ZQQ2 1576 aa24.47■■□□□ 1.51
TRAPPC9-213ENST00000522504 TNRQ92752 1358 aa24.47■■□□□ 1.51
TRAPPC9-213ENST00000522504 PZPP20742 1482 aa24.45■■□□□ 1.51
TRAPPC9-213ENST00000522504 KDM5DQ9BY66 1539 aa24.45■■□□□ 1.5
TRAPPC9-213ENST00000522504 SOCS7O14512 581 aa24.44■■□□□ 1.5
TRAPPC9-213ENST00000522504 RSPH4AQ5TD94 716 aa24.44■■□□□ 1.5
TRAPPC9-213ENST00000522504 WASHC2CQ9Y4E1 1318 aa24.43■■□□□ 1.5
TRAPPC9-213ENST00000522504 NEURL4Q96JN8 1562 aa24.42■■□□□ 1.5
TRAPPC9-213ENST00000522504 ARHGEF5Q12774 1597 aa24.4■■□□□ 1.5
TRAPPC9-213ENST00000522504 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.49
TRAPPC9-213ENST00000522504 MIA2Q96PC5 1412 aa24.38■■□□□ 1.49
TRAPPC9-213ENST00000522504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.38■■□□□ 1.49
TRAPPC9-213ENST00000522504 LRRC9Q6ZRR7 1453 aa24.38■■□□□ 1.49
TRAPPC9-213ENST00000522504 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
TRAPPC9-213ENST00000522504 TSPY4P0CV99 314 aa24.37■■□□□ 1.49
TRAPPC9-213ENST00000522504 TSPY10P0CW01 314 aa24.37■■□□□ 1.49
TRAPPC9-213ENST00000522504 KANK4Q5T7N3 995 aaPredicted RBP24.35■■□□□ 1.49
TRAPPC9-213ENST00000522504 VPS8Q8N3P4 1428 aa24.35■■□□□ 1.49
TRAPPC9-213ENST00000522504 SHANK2Q9UPX8 1470 aa24.33■■□□□ 1.49
TRAPPC9-213ENST00000522504 POLR1AO95602 1720 aaPredicted RBP24.33■■□□□ 1.49
TRAPPC9-213ENST00000522504 ANKLE2Q86XL3 938 aa24.33■■□□□ 1.49
TRAPPC9-213ENST00000522504 NLRP1Q9C000 1473 aa24.32■■□□□ 1.48
TRAPPC9-213ENST00000522504 THEMISQ8N1K5 641 aaPredicted RBP24.32■■□□□ 1.48
TRAPPC9-213ENST00000522504 ABCC3O15438 1527 aa24.3■■□□□ 1.48
TRAPPC9-213ENST00000522504 UGGT1Q9NYU2 1555 aa24.3■■□□□ 1.48
TRAPPC9-213ENST00000522504 VWDEQ8N2E2 1590 aa24.29■■□□□ 1.48
TRAPPC9-213ENST00000522504 RNF17Q9BXT8 1623 aaKnown RBP24.29■■□□□ 1.48
TRAPPC9-213ENST00000522504 CPS1P31327 1500 aa24.29■■□□□ 1.48
TRAPPC9-213ENST00000522504 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
TRAPPC9-213ENST00000522504 HSPA1LP34931 641 aa24.28■■□□□ 1.48
TRAPPC9-213ENST00000522504 PIP4K2BP78356 416 aa24.28■■□□□ 1.48
TRAPPC9-213ENST00000522504 NPHP4O75161 1426 aaPredicted RBP24.27■■□□□ 1.48
TRAPPC9-213ENST00000522504 MED14O60244 1454 aa24.27■■□□□ 1.48
TRAPPC9-213ENST00000522504 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
TRAPPC9-213ENST00000522504 MROH1Q8NDA8 1641 aa24.25■■□□□ 1.47
TRAPPC9-213ENST00000522504 TOM1O60784 492 aa24.23■■□□□ 1.47
TRAPPC9-213ENST00000522504 MYOM3Q5VTT5 1437 aa24.23■■□□□ 1.47
TRAPPC9-213ENST00000522504 ERVK-7P63135 1459 aa24.23■■□□□ 1.47
TRAPPC9-213ENST00000522504 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
TRAPPC9-213ENST00000522504 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
TRAPPC9-213ENST00000522504 ALKQ9UM73 1620 aa24.21■■□□□ 1.47
TRAPPC9-213ENST00000522504 EIF2AK4Q9P2K8 1649 aaKnown RBP24.2■■□□□ 1.46
TRAPPC9-213ENST00000522504 ZC3H13Q5T200 1668 aaKnown RBP24.19■■□□□ 1.46
TRAPPC9-213ENST00000522504 IQGAP1P46940 1657 aa24.18■■□□□ 1.46
TRAPPC9-213ENST00000522504 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
TRAPPC9-213ENST00000522504 STRCP1A6NGW2 1772 aa24.15■■□□□ 1.46
TRAPPC9-213ENST00000522504 CEP152O94986 1710 aa24.15■■□□□ 1.46
TRAPPC9-213ENST00000522504 ABCC5O15440 1437 aa24.14■■□□□ 1.45
TRAPPC9-213ENST00000522504 LRRC7Q96NW7 1537 aa24.14■■□□□ 1.45
TRAPPC9-213ENST00000522504 KIF15Q9NS87 1388 aa24.14■■□□□ 1.45
TRAPPC9-213ENST00000522504 RRP7BPQ9NSQ0 103 aa24.13■■□□□ 1.45
TRAPPC9-213ENST00000522504 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
TRAPPC9-213ENST00000522504 LTKP29376 864 aa24.12■■□□□ 1.45
TRAPPC9-213ENST00000522504 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
TRAPPC9-213ENST00000522504 CFAP65Q6ZU64 1925 aaKnown RBP24.1■■□□□ 1.45
TRAPPC9-213ENST00000522504 PRDM15P57071 1507 aaPredicted RBP24.09■■□□□ 1.45
TRAPPC9-213ENST00000522504 ARHGAP31Q2M1Z3 1444 aa24.09■■□□□ 1.45
TRAPPC9-213ENST00000522504 SCAF11Q99590 1463 aaKnown RBP24.08■■□□□ 1.45
TRAPPC9-213ENST00000522504 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
TRAPPC9-213ENST00000522504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.07■■□□□ 1.44
TRAPPC9-213ENST00000522504 ERBINQ96RT1 1412 aa24.07■■□□□ 1.44
TRAPPC9-213ENST00000522504 TXNDC2Q86VQ3 553 aa24.06■■□□□ 1.44
TRAPPC9-213ENST00000522504 SENP3Q9H4L4 574 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC9-213ENST00000522504 SLIT1O75093 1534 aa24.05■■□□□ 1.44
TRAPPC9-213ENST00000522504 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
TRAPPC9-213ENST00000522504 DAPK1P53355 1430 aa24.04■■□□□ 1.44
TRAPPC9-213ENST00000522504 CROCC2H7BZ55 1655 aa24.04■■□□□ 1.44
TRAPPC9-213ENST00000522504 SYNMO15061 1565 aa24.02■■□□□ 1.44
TRAPPC9-213ENST00000522504 CHIC2Q9UKJ5 165 aa24.01■■□□□ 1.43
TRAPPC9-213ENST00000522504 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
TRAPPC9-213ENST00000522504 PIK3C2BO00750 1634 aa23.99■■□□□ 1.43
TRAPPC9-213ENST00000522504 TMEM2Q9UHN6 1383 aa23.98■■□□□ 1.43
TRAPPC9-213ENST00000522504 IDI1Q13907 227 aa23.97■■□□□ 1.43
TRAPPC9-213ENST00000522504 APLP2Q06481 763 aa23.96■■□□□ 1.43
TRAPPC9-213ENST00000522504 EID1Q9Y6B2 187 aa23.96■■□□□ 1.43
TRAPPC9-213ENST00000522504 LMTK2Q8IWU2 1503 aa23.94■■□□□ 1.42
TRAPPC9-213ENST00000522504 KANK1Q14678 1352 aa23.94■■□□□ 1.42
TRAPPC9-213ENST00000522504 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
TRAPPC9-213ENST00000522504 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC9-213ENST00000522504 XIRP1Q702N8 1843 aaKnown RBP23.92■■□□□ 1.42
TRAPPC9-213ENST00000522504 STAG3Q9UJ98 1225 aa23.92■■□□□ 1.42
TRAPPC9-213ENST00000522504 EFCAB6Q5THR3 1501 aa23.9■■□□□ 1.42
TRAPPC9-213ENST00000522504 NOS1P29475 1434 aa23.89■■□□□ 1.41
TRAPPC9-213ENST00000522504 SLC26A8Q96RN1 970 aa23.88■■□□□ 1.41
TRAPPC9-213ENST00000522504 RBM33Q96EV2 1170 aaKnown RBP23.87■■□□□ 1.41
TRAPPC9-213ENST00000522504 TMEM94Q12767 1356 aa23.87■■□□□ 1.41
TRAPPC9-213ENST00000522504 TET3O43151 1660 aa23.86■■□□□ 1.41
TRAPPC9-213ENST00000522504 RGS17Q9UGC6 210 aaPredicted RBP23.85■■□□□ 1.41
TRAPPC9-213ENST00000522504 KDM5AP29375 1690 aaKnown RBP23.85■■□□□ 1.41
TRAPPC9-213ENST00000522504 ADGRL2O95490 1459 aa23.84■■□□□ 1.41
TRAPPC9-213ENST00000522504 KCNA6P17658 529 aa23.84■■□□□ 1.41
TRAPPC9-213ENST00000522504 ADGRB3O60242 1522 aa23.82■■□□□ 1.4
TRAPPC9-213ENST00000522504 FAM135BQ49AJ0 1406 aa23.82■■□□□ 1.4
TRAPPC9-213ENST00000522504 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
TRAPPC9-213ENST00000522504 PROSER2Q86WR7 435 aaPredicted RBP23.8■■□□□ 1.4
TRAPPC9-213ENST00000522504 SLC52A1Q9NWF4 448 aa23.8■■□□□ 1.4
TRAPPC9-213ENST00000522504 ANKRD50Q9ULJ7 1429 aa23.78■■□□□ 1.4
TRAPPC9-213ENST00000522504 ZFYVE9O95405 1425 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms