RNA–Protein interactions for RNA: ENST00000522399.1

TTC13-208, Transcript of tetratricopeptide repeat domain 13, humanhuman

TSL 4

Gene TTC13, Length 529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-208ENST00000522399 CEP170BQ9Y4F5 1589 aaPredicted RBP38.9■■■■□ 3.82
TTC13-208ENST00000522399 KDM5DQ9BY66 1539 aa38.89■■■■□ 3.82
TTC13-208ENST00000522399 APLP2Q06481 763 aa38.89■■■■□ 3.82
TTC13-208ENST00000522399 MAST1Q9Y2H9 1570 aa38.88■■■■□ 3.81
TTC13-208ENST00000522399 WASHC2CQ9Y4E1 1318 aa38.84■■■■□ 3.81
TTC13-208ENST00000522399 PLA2R1Q13018 1463 aa38.82■■■■□ 3.81
TTC13-208ENST00000522399 PZPP20742 1482 aa38.79■■■■□ 3.8
TTC13-208ENST00000522399 PKD2Q13563 968 aa38.77■■■■□ 3.8
TTC13-208ENST00000522399 NCKAP5LQ9HCH0 1330 aa38.77■■■■□ 3.8
TTC13-208ENST00000522399 A2ML1A8K2U0 1454 aa38.77■■■■□ 3.8
TTC13-208ENST00000522399 TNRQ92752 1358 aa38.74■■■■□ 3.79
TTC13-208ENST00000522399 RNF17Q9BXT8 1623 aaKnown RBP38.74■■■■□ 3.79
TTC13-208ENST00000522399 EIF2AK4Q9P2K8 1649 aaKnown RBP38.74■■■■□ 3.79
TTC13-208ENST00000522399 FBXO31Q5XUX0 539 aaPredicted RBP38.73■■■■□ 3.79
TTC13-208ENST00000522399 TCOF1Q13428 1488 aaKnown RBP38.73■■■■□ 3.79
TTC13-208ENST00000522399 LTBP4Q8N2S1 1624 aa38.72■■■■□ 3.79
TTC13-208ENST00000522399 DNMT1P26358 1616 aaKnown RBP38.71■■■■□ 3.79
TTC13-208ENST00000522399 PTPN23Q9H3S7 1636 aa38.68■■■■□ 3.78
TTC13-208ENST00000522399 ZC3H13Q5T200 1668 aaKnown RBP38.68■■■■□ 3.78
TTC13-208ENST00000522399 DUOX2Q9NRD8 1548 aa38.65■■■■□ 3.78
TTC13-208ENST00000522399 SHANK2Q9UPX8 1470 aa38.64■■■■□ 3.78
TTC13-208ENST00000522399 CROCC2H7BZ55 1655 aa38.64■■■■□ 3.78
TTC13-208ENST00000522399 ABCC3O15438 1527 aa38.63■■■■□ 3.77
TTC13-208ENST00000522399 IQSEC2Q5JU85 1478 aa38.62■■■■□ 3.77
TTC13-208ENST00000522399 ABCC5O15440 1437 aa38.6■■■■□ 3.77
TTC13-208ENST00000522399 FGD6Q6ZV73 1430 aa38.6■■■■□ 3.77
TTC13-208ENST00000522399 NLRP1Q9C000 1473 aa38.6■■■■□ 3.77
TTC13-208ENST00000522399 KIF15Q9NS87 1388 aa38.57■■■■□ 3.77
TTC13-208ENST00000522399 MROH1Q8NDA8 1641 aa38.57■■■■□ 3.77
TTC13-208ENST00000522399 POLR1AO95602 1720 aaPredicted RBP38.57■■■■□ 3.76
TTC13-208ENST00000522399 ZNF335Q9H4Z2 1342 aaPredicted RBP38.57■■■■□ 3.76
TTC13-208ENST00000522399 DAPK1P53355 1430 aa38.55■■■■□ 3.76
TTC13-208ENST00000522399 CEP152O94986 1710 aa38.52■■■■□ 3.76
TTC13-208ENST00000522399 THEMISQ8N1K5 641 aaPredicted RBP38.52■■■■□ 3.76
TTC13-208ENST00000522399 ERBINQ96RT1 1412 aa38.52■■■■□ 3.76
TTC13-208ENST00000522399 UGGT1Q9NYU2 1555 aa38.52■■■■□ 3.76
TTC13-208ENST00000522399 RRP7BPQ9NSQ0 103 aa38.51■■■■□ 3.76
TTC13-208ENST00000522399 SPATA31D1Q6ZQQ2 1576 aa38.51■■■■□ 3.76
TTC13-208ENST00000522399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.47■■■■□ 3.75
TTC13-208ENST00000522399 ERVK-7P63135 1459 aa38.47■■■■□ 3.75
TTC13-208ENST00000522399 NEURL4Q96JN8 1562 aa38.46■■■■□ 3.75
TTC13-208ENST00000522399 ANKLE2Q86XL3 938 aa38.46■■■■□ 3.75
TTC13-208ENST00000522399 PRDM15P57071 1507 aaPredicted RBP38.46■■■■□ 3.75
TTC13-208ENST00000522399 ANKRD30AQ9BXX3 1397 aa38.42■■■■□ 3.74
TTC13-208ENST00000522399 CFAP65Q6ZU64 1925 aaKnown RBP38.42■■■■□ 3.74
TTC13-208ENST00000522399 DEPDC5O75140 1603 aa38.38■■■■□ 3.74
TTC13-208ENST00000522399 CHIC2Q9UKJ5 165 aa38.37■■■■□ 3.73
TTC13-208ENST00000522399 ARHGAP31Q2M1Z3 1444 aa38.36■■■■□ 3.73
TTC13-208ENST00000522399 KANK1Q14678 1352 aa38.35■■■■□ 3.73
TTC13-208ENST00000522399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.35■■■■□ 3.73
TTC13-208ENST00000522399 MED14O60244 1454 aa38.34■■■■□ 3.73
TTC13-208ENST00000522399 NPHP4O75161 1426 aaPredicted RBP38.32■■■■□ 3.73
TTC13-208ENST00000522399 CPS1P31327 1500 aa38.29■■■■□ 3.72
TTC13-208ENST00000522399 UBAP1LF5GYI3 381 aa38.29■■■■□ 3.72
TTC13-208ENST00000522399 FAM50AQ14320 339 aaKnown RBP38.29■■■■□ 3.72
TTC13-208ENST00000522399 UBR1Q8IWV7 1749 aa38.28■■■■□ 3.72
TTC13-208ENST00000522399 IQGAP1P46940 1657 aa38.27■■■■□ 3.72
TTC13-208ENST00000522399 ADGRL2O95490 1459 aa38.27■■■■□ 3.72
TTC13-208ENST00000522399 VWDEQ8N2E2 1590 aa38.22■■■■□ 3.71
TTC13-208ENST00000522399 LMTK2Q8IWU2 1503 aa38.22■■■■□ 3.71
TTC13-208ENST00000522399 SCAF11Q99590 1463 aaKnown RBP38.15■■■■□ 3.7
TTC13-208ENST00000522399 SLIT1O75093 1534 aa38.13■■■■□ 3.69
TTC13-208ENST00000522399 PIK3C2BO00750 1634 aa38.12■■■■□ 3.69
TTC13-208ENST00000522399 ANKRD50Q9ULJ7 1429 aa38.12■■■■□ 3.69
TTC13-208ENST00000522399 ARHGAP23Q9P227 1491 aa38.11■■■■□ 3.69
TTC13-208ENST00000522399 DISP3Q9P2K9 1392 aa38.11■■■■□ 3.69
TTC13-208ENST00000522399 EFCAB6Q5THR3 1501 aa38.1■■■■□ 3.69
TTC13-208ENST00000522399 STAG3Q9UJ98 1225 aa38.09■■■■□ 3.69
TTC13-208ENST00000522399 TXNDC2Q86VQ3 553 aa38.08■■■■□ 3.69
TTC13-208ENST00000522399 TOM1O60784 492 aa38.07■■■■□ 3.68
TTC13-208ENST00000522399 EID1Q9Y6B2 187 aa38.07■■■■□ 3.68
TTC13-208ENST00000522399 KDM5AP29375 1690 aaKnown RBP38.06■■■■□ 3.68
TTC13-208ENST00000522399 LTKP29376 864 aa38.04■■■■□ 3.68
TTC13-208ENST00000522399 SYNMO15061 1565 aa38.02■■■■□ 3.68
TTC13-208ENST00000522399 SCAF1Q9H7N4 1312 aaKnown RBP38.02■■■■□ 3.68
TTC13-208ENST00000522399 TMEM2Q9UHN6 1383 aa38.02■■■■□ 3.68
TTC13-208ENST00000522399 NOS1P29475 1434 aa38.02■■■■□ 3.68
TTC13-208ENST00000522399 STRCP1A6NGW2 1772 aa38.01■■■■□ 3.68
TTC13-208ENST00000522399 IDI1Q13907 227 aa38.01■■■■□ 3.68
TTC13-208ENST00000522399 RPRD2Q5VT52 1461 aaKnown RBP37.98■■■■□ 3.67
TTC13-208ENST00000522399 PIP4K2BP78356 416 aa37.98■■■■□ 3.67
TTC13-208ENST00000522399 TET3O43151 1660 aa37.95■■■■□ 3.67
TTC13-208ENST00000522399 LRRC7Q96NW7 1537 aa37.95■■■■□ 3.67
TTC13-208ENST00000522399 ROCK1Q13464 1354 aa37.94■■■■□ 3.66
TTC13-208ENST00000522399 SLC52A1Q9NWF4 448 aa37.94■■■■□ 3.66
TTC13-208ENST00000522399 UNC13BO14795 1591 aa37.93■■■■□ 3.66
TTC13-208ENST00000522399 ADGRB3O60242 1522 aa37.92■■■■□ 3.66
TTC13-208ENST00000522399 GCC2Q8IWJ2 1684 aa37.89■■■■□ 3.66
TTC13-208ENST00000522399 HSPA1LP34931 641 aa37.85■■■■□ 3.65
TTC13-208ENST00000522399 PPARGC1BQ86YN6 1023 aaKnown RBP37.84■■■■□ 3.65
TTC13-208ENST00000522399 ALKQ9UM73 1620 aa37.83■■■■□ 3.65
TTC13-208ENST00000522399 ITGAEP38570 1179 aa37.82■■■■□ 3.64
TTC13-208ENST00000522399 ILDR2Q71H61 639 aa37.8■■■■□ 3.64
TTC13-208ENST00000522399 IQGAP3Q86VI3 1631 aa37.78■■■■□ 3.64
TTC13-208ENST00000522399 E9PCH4 1651 aa37.76■■■■□ 3.63
TTC13-208ENST00000522399 MYO5BQ9ULV0 1848 aa37.75■■■■□ 3.63
TTC13-208ENST00000522399 SLC26A8Q96RN1 970 aa37.73■■■■□ 3.63
TTC13-208ENST00000522399 XIRP1Q702N8 1843 aaKnown RBP37.73■■■■□ 3.63
TTC13-208ENST00000522399 NUP155O75694 1391 aa37.71■■■■□ 3.63
TTC13-208ENST00000522399 BCANQ96GW7 911 aa37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms