RNA–Protein interactions for RNA: ENST00000522250.5

FAM49B-220, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 1,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-220ENST00000522250 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
FAM49B-220ENST00000522250 NCKAP5LQ9HCH0 1330 aa18.42■□□□□ 0.54
FAM49B-220ENST00000522250 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
FAM49B-220ENST00000522250 A2ML1A8K2U0 1454 aa18.41■□□□□ 0.54
FAM49B-220ENST00000522250 DNMT1P26358 1616 aaKnown RBP18.41■□□□□ 0.54
FAM49B-220ENST00000522250 PZPP20742 1482 aa18.4■□□□□ 0.54
FAM49B-220ENST00000522250 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
FAM49B-220ENST00000522250 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.54
FAM49B-220ENST00000522250 MIA2Q96PC5 1412 aa18.39■□□□□ 0.53
FAM49B-220ENST00000522250 TSPY4P0CV99 314 aa18.38■□□□□ 0.53
FAM49B-220ENST00000522250 TSPY10P0CW01 314 aa18.38■□□□□ 0.53
FAM49B-220ENST00000522250 FBXO31Q5XUX0 539 aaPredicted RBP18.38■□□□□ 0.53
FAM49B-220ENST00000522250 TNRQ92752 1358 aa18.37■□□□□ 0.53
FAM49B-220ENST00000522250 PKD2Q13563 968 aa18.37■□□□□ 0.53
FAM49B-220ENST00000522250 IQSEC2Q5JU85 1478 aa18.36■□□□□ 0.53
FAM49B-220ENST00000522250 EIF2AK4Q9P2K8 1649 aaKnown RBP18.36■□□□□ 0.53
FAM49B-220ENST00000522250 WASHC2CQ9Y4E1 1318 aa18.35■□□□□ 0.53
FAM49B-220ENST00000522250 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
FAM49B-220ENST00000522250 MROH1Q8NDA8 1641 aa18.35■□□□□ 0.53
FAM49B-220ENST00000522250 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
FAM49B-220ENST00000522250 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
FAM49B-220ENST00000522250 ABCC3O15438 1527 aa18.33■□□□□ 0.53
FAM49B-220ENST00000522250 NEURL4Q96JN8 1562 aa18.33■□□□□ 0.53
FAM49B-220ENST00000522250 CROCC2H7BZ55 1655 aa18.33■□□□□ 0.52
FAM49B-220ENST00000522250 CEP152O94986 1710 aa18.3■□□□□ 0.52
FAM49B-220ENST00000522250 PTPN23Q9H3S7 1636 aa18.3■□□□□ 0.52
FAM49B-220ENST00000522250 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
FAM49B-220ENST00000522250 DUOX2Q9NRD8 1548 aa18.29■□□□□ 0.52
FAM49B-220ENST00000522250 SPATA31D1Q6ZQQ2 1576 aa18.28■□□□□ 0.52
FAM49B-220ENST00000522250 SHANK2Q9UPX8 1470 aa18.28■□□□□ 0.52
FAM49B-220ENST00000522250 ABCC5O15440 1437 aa18.27■□□□□ 0.52
FAM49B-220ENST00000522250 UGGT1Q9NYU2 1555 aa18.27■□□□□ 0.51
FAM49B-220ENST00000522250 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
FAM49B-220ENST00000522250 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.25■□□□□ 0.515e-6■■■□□ 14.8
FAM49B-220ENST00000522250 KIF15Q9NS87 1388 aa18.25■□□□□ 0.51
FAM49B-220ENST00000522250 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
FAM49B-220ENST00000522250 PRDM15P57071 1507 aaPredicted RBP18.24■□□□□ 0.51
FAM49B-220ENST00000522250 DEPDC5O75140 1603 aa18.23■□□□□ 0.51
FAM49B-220ENST00000522250 DAPK1P53355 1430 aa18.23■□□□□ 0.51
FAM49B-220ENST00000522250 APLP2Q06481 763 aa18.23■□□□□ 0.51
FAM49B-220ENST00000522250 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
FAM49B-220ENST00000522250 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
FAM49B-220ENST00000522250 THEMISQ8N1K5 641 aaPredicted RBP18.21■□□□□ 0.51
FAM49B-220ENST00000522250 MED14O60244 1454 aa18.21■□□□□ 0.51
FAM49B-220ENST00000522250 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
FAM49B-220ENST00000522250 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
FAM49B-220ENST00000522250 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
FAM49B-220ENST00000522250 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
FAM49B-220ENST00000522250 IQGAP1P46940 1657 aa18.19■□□□□ 0.5
FAM49B-220ENST00000522250 NPHP4O75161 1426 aaPredicted RBP18.19■□□□□ 0.5
FAM49B-220ENST00000522250 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
FAM49B-220ENST00000522250 CPS1P31327 1500 aa18.18■□□□□ 0.5
FAM49B-220ENST00000522250 ARHGAP31Q2M1Z3 1444 aa18.17■□□□□ 0.5
FAM49B-220ENST00000522250 DISP3Q9P2K9 1392 aa18.17■□□□□ 0.5
FAM49B-220ENST00000522250 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.49
FAM49B-220ENST00000522250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
FAM49B-220ENST00000522250 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
FAM49B-220ENST00000522250 ANKRD30AQ9BXX3 1397 aa18.12■□□□□ 0.49
FAM49B-220ENST00000522250 LMTK2Q8IWU2 1503 aa18.11■□□□□ 0.49
FAM49B-220ENST00000522250 PIK3C2BO00750 1634 aa18.11■□□□□ 0.49
FAM49B-220ENST00000522250 ADGRL2O95490 1459 aa18.11■□□□□ 0.49
FAM49B-220ENST00000522250 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
FAM49B-220ENST00000522250 SLIT1O75093 1534 aa18.11■□□□□ 0.49
FAM49B-220ENST00000522250 ILDR2Q71H61 639 aa18.1■□□□□ 0.49
FAM49B-220ENST00000522250 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
FAM49B-220ENST00000522250 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
FAM49B-220ENST00000522250 KANK1Q14678 1352 aa18.09■□□□□ 0.49
FAM49B-220ENST00000522250 SYNMO15061 1565 aa18.07■□□□□ 0.48
FAM49B-220ENST00000522250 EFCAB6Q5THR3 1501 aa18.07■□□□□ 0.48
FAM49B-220ENST00000522250 LTKP29376 864 aa18.06■□□□□ 0.48
FAM49B-220ENST00000522250 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
FAM49B-220ENST00000522250 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
FAM49B-220ENST00000522250 LRRC7Q96NW7 1537 aa18.05■□□□□ 0.48
FAM49B-220ENST00000522250 PIP4K2BP78356 416 aa18.05■□□□□ 0.48
FAM49B-220ENST00000522250 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
FAM49B-220ENST00000522250 TOM1O60784 492 aa18.03■□□□□ 0.48
FAM49B-220ENST00000522250 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
FAM49B-220ENST00000522250 TXNDC2Q86VQ3 553 aa18.02■□□□□ 0.48
FAM49B-220ENST00000522250 TMEM2Q9UHN6 1383 aa18.02■□□□□ 0.48
FAM49B-220ENST00000522250 NOS1P29475 1434 aa18.02■□□□□ 0.48
FAM49B-220ENST00000522250 HSPA1LP34931 641 aa18.01■□□□□ 0.47
FAM49B-220ENST00000522250 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
FAM49B-220ENST00000522250 IDI1Q13907 227 aa18■□□□□ 0.47
FAM49B-220ENST00000522250 XIRP1Q702N8 1843 aaKnown RBP18■□□□□ 0.47
FAM49B-220ENST00000522250 ADGRB3O60242 1522 aa17.99■□□□□ 0.47
FAM49B-220ENST00000522250 TET3O43151 1660 aa17.98■□□□□ 0.47
FAM49B-220ENST00000522250 SENP3Q9H4L4 574 aaPredicted RBP17.98■□□□□ 0.47
FAM49B-220ENST00000522250 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
FAM49B-220ENST00000522250 UNC13BO14795 1591 aa17.98■□□□□ 0.47
FAM49B-220ENST00000522250 RPRD2Q5VT52 1461 aaKnown RBP17.97■□□□□ 0.47
FAM49B-220ENST00000522250 STAG3Q9UJ98 1225 aa17.96■□□□□ 0.47
FAM49B-220ENST00000522250 GCC2Q8IWJ2 1684 aa17.95■□□□□ 0.46
FAM49B-220ENST00000522250 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
FAM49B-220ENST00000522250 MYO5BQ9ULV0 1848 aa17.95■□□□□ 0.46
FAM49B-220ENST00000522250 SOCS7O14512 581 aa17.94■□□□□ 0.46
FAM49B-220ENST00000522250 SLC52A1Q9NWF4 448 aa17.91■□□□□ 0.46
FAM49B-220ENST00000522250 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
FAM49B-220ENST00000522250 E9PCH4 1651 aa17.91■□□□□ 0.46
FAM49B-220ENST00000522250 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
FAM49B-220ENST00000522250 IQGAP3Q86VI3 1631 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms